BLASTX nr result

ID: Coptis21_contig00002651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002651
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530965.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_002325891.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002319207.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CBI31178.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_003554073.1| PREDICTED: uncharacterized protein LOC100778...    58   7e-07

>ref|XP_002530965.1| conserved hypothetical protein [Ricinus communis]
           gi|223529480|gb|EEF31437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1204

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/56 (53%), Positives = 42/56 (75%)
 Frame = +1

Query: 157 MGMDAMEIRVQIQKVLIFTMKTSYRSACDHPFILGMLCFFIFLYTYLPSLFFFLVS 324
           MG+DAM IRV+I++ L+ +++T Y+S C HPF++G +CF IFLY   P LF  LVS
Sbjct: 1   MGLDAMRIRVEIKRFLVISIRTCYKSVCKHPFLVGFVCFLIFLYKSFPFLFSLLVS 56


>ref|XP_002325891.1| predicted protein [Populus trichocarpa] gi|222862766|gb|EEF00273.1|
           predicted protein [Populus trichocarpa]
          Length = 1384

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/57 (50%), Positives = 41/57 (71%)
 Frame = +1

Query: 154 KMGMDAMEIRVQIQKVLIFTMKTSYRSACDHPFILGMLCFFIFLYTYLPSLFFFLVS 324
           +MG+DAM+IRVQI+K  +   +  YRS C HPF++GM+C+ + LY+  P LF  LVS
Sbjct: 15  RMGIDAMKIRVQIRKFSVILFRLCYRSVCKHPFLVGMVCYLLLLYSSFPVLFSLLVS 71


>ref|XP_002319207.1| predicted protein [Populus trichocarpa] gi|222857583|gb|EEE95130.1|
           predicted protein [Populus trichocarpa]
          Length = 1661

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/56 (50%), Positives = 40/56 (71%)
 Frame = +1

Query: 157 MGMDAMEIRVQIQKVLIFTMKTSYRSACDHPFILGMLCFFIFLYTYLPSLFFFLVS 324
           MG+DAM IRVQI++ L+ + +  YRS C HPF++GM+C+ + LY   P LF  LV+
Sbjct: 1   MGIDAMRIRVQIRRFLVISFQLCYRSVCKHPFLVGMVCYLLLLYRSFPFLFSLLVT 56


>emb|CBI31178.3| unnamed protein product [Vitis vinifera]
          Length = 1205

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/56 (48%), Positives = 39/56 (69%)
 Frame = +1

Query: 157 MGMDAMEIRVQIQKVLIFTMKTSYRSACDHPFILGMLCFFIFLYTYLPSLFFFLVS 324
           MG D ++I +QI++ LIF+ +  YRS C+HPF++G + F IFLY   P +F  LVS
Sbjct: 1   MGFDGLKIGIQIKRGLIFSTRICYRSVCNHPFLVGFVFFLIFLYRSFPFVFSILVS 56


>ref|XP_003554073.1| PREDICTED: uncharacterized protein LOC100778840 [Glycine max]
          Length = 1348

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/50 (46%), Positives = 36/50 (72%)
 Frame = +1

Query: 175 EIRVQIQKVLIFTMKTSYRSACDHPFILGMLCFFIFLYTYLPSLFFFLVS 324
           EI ++++KV++ +++  YRSAC+HPF++G  CF + LY   P LF  LVS
Sbjct: 4   EIGIKVRKVVVISIRGGYRSACNHPFLVGFFCFLLLLYRSFPFLFSVLVS 53


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