BLASTX nr result

ID: Coptis21_contig00002591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002591
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064028.1| orf120 gene product (mitochondrion) [Beta vulga...    58   7e-07
ref|YP_004222271.1| hypothetical protein BevumaM_p032 [Beta vulg...    57   1e-06
dbj|BAD66760.1| orf120b [Beta vulgaris subsp. vulgaris] gi|54606...    56   3e-06

>ref|NP_064028.1| orf120 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|346683146|ref|YP_004842078.1| hypothetical protein
           BemaM_p030 [Beta macrocarpa] gi|9049329|dbj|BAA99339.1|
           orf120 [Beta vulgaris subsp. vulgaris]
           gi|345500064|emb|CBX24880.1| hypothetical protein [Beta
           macrocarpa]
          Length = 120

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/73 (35%), Positives = 44/73 (60%)
 Frame = -1

Query: 420 ELGQVSEEDVSCSLEFSKLVARVRVLLDIKERLTKDLTIMLETGTSFHVQFKYEKLDIFC 241
           ++G   + D   S+E  K + R+RVL+D ++ LT+ + + +  G  +  + KYEKL +FC
Sbjct: 5   KIGSFIQLDKWDSMEIDKSL-RIRVLIDARKPLTQKIKLKMRGGQEYFAEVKYEKLPLFC 63

Query: 240 YFCGVIGHDHSAC 202
           Y+CG +GH    C
Sbjct: 64  YYCGKLGHGTKDC 76


>ref|YP_004222271.1| hypothetical protein BevumaM_p032 [Beta vulgaris subsp. maritima]
           gi|317905706|emb|CBJ14095.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439786|emb|CBJ17504.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 120

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/73 (35%), Positives = 44/73 (60%)
 Frame = -1

Query: 420 ELGQVSEEDVSCSLEFSKLVARVRVLLDIKERLTKDLTIMLETGTSFHVQFKYEKLDIFC 241
           ++G   + D   S+E  K + R+RVL+D ++ LT+ + + +  G  +  + KYEKL +FC
Sbjct: 5   KIGSFIQLDKWDSMEIDKSL-RIRVLIDARKPLTQKIKLKMRGGQEYLAEVKYEKLPLFC 63

Query: 240 YFCGVIGHDHSAC 202
           Y+CG +GH    C
Sbjct: 64  YYCGKLGHGTKDC 76


>dbj|BAD66760.1| orf120b [Beta vulgaris subsp. vulgaris] gi|54606775|dbj|BAD66798.1|
           orf120b [Beta vulgaris subsp. vulgaris]
           gi|384939204|emb|CBL52051.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 120

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/73 (35%), Positives = 43/73 (58%)
 Frame = -1

Query: 420 ELGQVSEEDVSCSLEFSKLVARVRVLLDIKERLTKDLTIMLETGTSFHVQFKYEKLDIFC 241
           ++G   + D   S+E  K + R+RVL+D ++ LT+ + + +  G     + KYEKL +FC
Sbjct: 5   KIGSFIQLDKWDSMEIDKSL-RIRVLIDARKPLTQKIKLKMRGGQEDFAEVKYEKLPLFC 63

Query: 240 YFCGVIGHDHSAC 202
           Y+CG +GH    C
Sbjct: 64  YYCGKLGHGTKDC 76


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