BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002518
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   209   1e-51
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   206   1e-50
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   205   2e-50
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   197   5e-48
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   197   7e-48

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
            gi|449490588|ref|XP_004158648.1| PREDICTED: F-box protein
            SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  209 bits (532), Expect = 1e-51
 Identities = 126/297 (42%), Positives = 176/297 (59%), Gaps = 3/297 (1%)
 Frame = -3

Query: 1255 ETRNWLALPQQITTLIFQKLGVMEIIARAQWVCSPWRKLAKEPTLYRCIDMRNPWQEIWD 1076
            E+RNWL LP  +T++I QKLG +EI+  AQ+VCS WRK+ ++P ++R IDMR P  + WD
Sbjct: 13   ESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPC-DWWD 71

Query: 1075 INAYDDYADLAREAFKRCNGDLEEFSMENFATDELMYLAGYVTYT--SLRCLRLVCCYQV 902
            ++   +  +L R+A KR  G L  F++E+F TD+L+    Y+T +   L  LRLV C ++
Sbjct: 72   MDY--NLEELCRQAVKRSCGQLIHFNIEHFGTDDLLL---YITQSCNQLSRLRLVYCNRI 126

Query: 901  SDEALMKLLENNPFLEEVELIDCDFKAETIEDVGRSCPLLKSFRLNGEEKXXXXXXXXXX 722
            SDE L++ +   P LE++EL  C F  ET+E +G++CP LKS +LN +            
Sbjct: 127  SDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQ--------FYRR 178

Query: 721  XXXXXEALAIANYMPKLRRLHLSRNKLTNTGLEAILNGCPYLKYLNLQECFNIELNAELR 542
                  ALAIA  MP LR LH+  N LTN GLEAIL+GC  L+ L+L+ CFN+ L  +L 
Sbjct: 179  VECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLG 238

Query: 541  KKC-ERIKKLVVPDDLADDYEFDGAGKYLGSNDEDDASEVSNEDYVCELPDLHFTND 374
             KC E+IK L +P D  DD EF          D+DD  +  + DY   L D     D
Sbjct: 239  AKCSEKIKDLRLPHDPTDDCEFT-----TEIVDDDDTYD-DDYDYPFGLSDTDLLTD 289


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  206 bits (524), Expect = 1e-50
 Identities = 122/286 (42%), Positives = 168/286 (58%), Gaps = 1/286 (0%)
 Frame = -3

Query: 1255 ETRNWLALPQQITTLIFQKLGVMEIIARAQWVCSPWRKLAKEPTLYRCIDMRNPWQEIWD 1076
            E RNWL LP+ +   IFQKLG  EI+ RAQ VCS WR ++KEP L+R IDMRN    + D
Sbjct: 10   EERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDMRN----LGD 65

Query: 1075 INAYDDYADLAREAFKRCNGDLEEFSMENFATDELMYLAGYVTYTSLRCLRLVCCYQVSD 896
            I        +   A    +G L   ++E F TD+L++   + T ++LR LRL CCYQ+SD
Sbjct: 66   IGLDFHLLAMCHRAIDYSSGHLLHINVEYFGTDDLLHHITHST-SNLRSLRLACCYQISD 124

Query: 895  EALMKLLENNPFLEEVELIDCDFKAETIEDVGRSCPLLKSFRLNGEEKXXXXXXXXXXXX 716
            E L ++ E  P LEE+++   +   + +E +G+ CP LK+ + N E              
Sbjct: 125  EGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNME------GYRRPHIE 178

Query: 715  XXXEALAIANYMPKLRRLHLSRNKLTNTGLEAILNGCPYLKYLNLQECFNIELNAELRKK 536
               EA AIA  MP L  L L  NKLTN GL AIL+GCP L+ L+L++CFN+ L   L K+
Sbjct: 179  CDEEAFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKR 238

Query: 535  C-ERIKKLVVPDDLADDYEFDGAGKYLGSNDEDDASEVSNEDYVCE 401
            C E+IK+L +P D  DDY F+    Y GS DED  S +S+ D++ +
Sbjct: 239  CAEQIKELRLPCDPTDDYPFEAEIDY-GSLDEDYPSGISDIDFLSD 283


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
            gi|147853333|emb|CAN82327.1| hypothetical protein
            VITISV_041807 [Vitis vinifera]
            gi|297740788|emb|CBI30970.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  205 bits (522), Expect = 2e-50
 Identities = 123/289 (42%), Positives = 172/289 (59%), Gaps = 3/289 (1%)
 Frame = -3

Query: 1258 EETRNWLALPQQITTLIFQKLGVMEIIARAQWVCSPWRKLAKEPTLYRCIDMRNPWQEIW 1079
            EE RNW  LP+ +T++I  KL  +EI++ AQ+VCS WRKL +EP ++R IDM N   ++ 
Sbjct: 15   EEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHN-LGDLC 73

Query: 1078 DINAYDDYADLAREAFKRCNGDLEEFSMENFATDELMYLAGYVTYTS--LRCLRLVCCYQ 905
            D+    D  ++AR A  R  G L    +++FATD L+    Y+   S  +R LRLV CY 
Sbjct: 74   DLGY--DLEEMARHAVDRSGGQLLSICIDDFATDNLL---NYIIDRSSHIRHLRLVSCYG 128

Query: 904  VSDEALMKLLENNPFLEEVELIDCDFKAETIEDVGRSCPLLKSFRLNGEEKXXXXXXXXX 725
            +SD+ L + ++  P L E++L  C F  E +E +G+ CP LKSFRLN +           
Sbjct: 129  ISDDGLSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQ------GFRHP 182

Query: 724  XXXXXXEALAIANYMPKLRRLHLSRNKLTNTGLEAILNGCPYLKYLNLQECFNIELNAEL 545
                  EALAIA  MP L+ L L  NKLTN GL AIL+GC +L+ L+L++CFN+ L   L
Sbjct: 183  HIECDEEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNL 242

Query: 544  RKKC-ERIKKLVVPDDLADDYEFDGAGKYLGSNDEDDASEVSNEDYVCE 401
             K+C E+IK L  P+D  DDYEFD       S DE+  S +S+ D + +
Sbjct: 243  AKRCAEQIKILRYPNDSTDDYEFDAEIHDDASFDEEYPSGISDLDLLSD 291


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  197 bits (501), Expect = 5e-48
 Identities = 123/289 (42%), Positives = 169/289 (58%), Gaps = 3/289 (1%)
 Frame = -3

Query: 1258 EETRNWLALPQQITTLIFQKLGVMEIIARAQWVCSPWRKLAKEPTLYRCIDMRNPWQEIW 1079
            EE RNWL LP+ +   IFQKLG +EI+ RAQ VCS WR ++KEP L+R IDMRN      
Sbjct: 15   EEERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNS----G 70

Query: 1078 DINAYDDYADLAREAFKRCNGDLEEFSMENFATDELMYLAGYVTYTSLRCLRLVCCYQVS 899
            DI     +  +   A    +G L   ++E FATD+L+    + T ++LR LRL CCYQ+S
Sbjct: 71   DIETNFVFLAMCHRAIDYSSGHLLHINIEYFATDDLLRHITHST-SNLRSLRLACCYQIS 129

Query: 898  DEALMKLLENNPFLEEVELIDCDFK--AETIEDVGRSCPLLKSFRLNGEEKXXXXXXXXX 725
            DE L ++ +  P LEE+++    F    + +E VGR C  LK+ + N             
Sbjct: 130  DEGLCEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFN------MKGYRRP 183

Query: 724  XXXXXXEALAIANYMPKLRRLHLSRNKLTNTGLEAILNGCPYLKYLNLQECFNIELNAEL 545
                  EA AIA  MP L  L L  NKLTN GL AIL+GCP+L+ L+L++CFN+ L   L
Sbjct: 184  HIECDEEAFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSL 243

Query: 544  RKKC-ERIKKLVVPDDLADDYEFDGAGKYLGSNDEDDASEVSNEDYVCE 401
             K+C E+IK+L +P D  DD  F+    Y GS DE D+S +S+ D++ +
Sbjct: 244  GKRCAEQIKELRLPCDPTDDCPFEADVDY-GSLDE-DSSAISDIDFLSD 290


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 305

 Score =  197 bits (500), Expect = 7e-48
 Identities = 115/297 (38%), Positives = 172/297 (57%), Gaps = 2/297 (0%)
 Frame = -3

Query: 1267 VKPEETRNWLALPQQITTLIFQKLGVMEIIARAQWVCSPWRKLAKEPTLYRCIDMRNPWQ 1088
            ++ +  RNW  LP+ +T LI  K+G  +I+  AQ+VCS W  + K+P+++R +++ +P  
Sbjct: 11   LQEDSYRNWAELPRDVTALILDKVGAFDILGSAQFVCSSWNSVCKDPSMWRSVEI-HPLC 69

Query: 1087 EIWDINAYDDYADLAREAFKRCNGDLEEFSMENFATDELM-YLAGYVTYTSLRCLRLVCC 911
            + WD+    D   L R A  R  G L   S+E FATD L+ Y+A   ++  L+ LRL+  
Sbjct: 70   DFWDLPF--DLEALCRNAVDRSRGGLISISIEYFATDSLIKYIADRSSH--LKRLRLLSS 125

Query: 910  YQVSDEALMKLLENNPFLEEVELIDCDFKAETIEDVGRSCPLLKSFRLNGEEKXXXXXXX 731
            Y +SD A  K  +  P LEE+++  C    E +  VG SCPLL+S +LN +         
Sbjct: 126  YTLSDAAFSKAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKLNCQ------GYK 179

Query: 730  XXXXXXXXEALAIANYMPKLRRLHLSRNKLTNTGLEAILNGCPYLKYLNLQECFNIELNA 551
                    EALAI  +MP LR L +  NKLTN G++AIL+GCP+L++L+L++CFN+ L  
Sbjct: 180  RPHIESNEEALAIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEG 239

Query: 550  ELRKKC-ERIKKLVVPDDLADDYEFDGAGKYLGSNDEDDASEVSNEDYVCELPDLHF 383
            EL   C ERIK L  PDD  DDY F+      GS++ED  S  S+ ++  +  D ++
Sbjct: 240  ELGMLCGERIKDLRRPDDPTDDYPFNPEIPDYGSSEEDYPSGFSDMEFATDDDDDYY 296