BLASTX nr result

ID: Coptis21_contig00002498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002498
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31420.3| unnamed protein product [Vitis vinifera]              216   5e-54
ref|XP_002273083.1| PREDICTED: lysine-specific histone demethyla...   216   5e-54
ref|XP_004158625.1| PREDICTED: LOW QUALITY PROTEIN: lysine-speci...   210   4e-52
ref|XP_004140213.1| PREDICTED: lysine-specific histone demethyla...   210   4e-52
ref|XP_002529596.1| amine oxidase, putative [Ricinus communis] g...   200   4e-49

>emb|CBI31420.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score =  216 bits (550), Expect = 5e-54
 Identities = 115/186 (61%), Positives = 133/186 (71%), Gaps = 6/186 (3%)
 Frame = -3

Query: 541 FTKLEKNN------TVHDFSEDIVFINKEATSEALLALSSGFPADSLTXXXXXXXXXXXX 380
           F+KL   N       V D S++I+ INKEATSEAL+ALS+GFPADSLT            
Sbjct: 59  FSKLSIENPTSSTAAVPDISDEIIVINKEATSEALIALSAGFPADSLTEEEIDAGVLSII 118

Query: 379 XXXEQVNYILIRNHILTKWRENVSSWVCKDMFLGIIPPHCEPLLNSAYGFLLSHGYVNFG 200
              EQVNYILIRNHIL KWRENVSSWV K+MFLG +P HC  LL+SAY FL++HGYVNFG
Sbjct: 119 GGIEQVNYILIRNHILAKWRENVSSWVAKEMFLGSVPSHCHILLDSAYNFLVTHGYVNFG 178

Query: 199 VAPAIRDKVFVEASKPNVIVIXXXXXXXXXARQLMAFGFKVIVLEGRKRAGGRVYTKKMQ 20
           VA AI++K+  E SK NV+VI         ARQLM FG+KV VLEGRKRAGGRVYTKKM+
Sbjct: 179 VAHAIKEKIPTEPSKQNVVVIGAGLAGLAAARQLMRFGYKVTVLEGRKRAGGRVYTKKME 238

Query: 19  GGTKIA 2
           GG + A
Sbjct: 239 GGNRTA 244


>ref|XP_002273083.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3-like
           [Vitis vinifera]
          Length = 992

 Score =  216 bits (550), Expect = 5e-54
 Identities = 115/186 (61%), Positives = 133/186 (71%), Gaps = 6/186 (3%)
 Frame = -3

Query: 541 FTKLEKNN------TVHDFSEDIVFINKEATSEALLALSSGFPADSLTXXXXXXXXXXXX 380
           F+KL   N       V D S++I+ INKEATSEAL+ALS+GFPADSLT            
Sbjct: 93  FSKLSIENPTSSTAAVPDISDEIIVINKEATSEALIALSAGFPADSLTEEEIDAGVLSII 152

Query: 379 XXXEQVNYILIRNHILTKWRENVSSWVCKDMFLGIIPPHCEPLLNSAYGFLLSHGYVNFG 200
              EQVNYILIRNHIL KWRENVSSWV K+MFLG +P HC  LL+SAY FL++HGYVNFG
Sbjct: 153 GGIEQVNYILIRNHILAKWRENVSSWVAKEMFLGSVPSHCHILLDSAYNFLVTHGYVNFG 212

Query: 199 VAPAIRDKVFVEASKPNVIVIXXXXXXXXXARQLMAFGFKVIVLEGRKRAGGRVYTKKMQ 20
           VA AI++K+  E SK NV+VI         ARQLM FG+KV VLEGRKRAGGRVYTKKM+
Sbjct: 213 VAHAIKEKIPTEPSKQNVVVIGAGLAGLAAARQLMRFGYKVTVLEGRKRAGGRVYTKKME 272

Query: 19  GGTKIA 2
           GG + A
Sbjct: 273 GGNRTA 278


>ref|XP_004158625.1| PREDICTED: LOW QUALITY PROTEIN: lysine-specific histone demethylase
           1 homolog 3-like [Cucumis sativus]
          Length = 982

 Score =  210 bits (534), Expect = 4e-52
 Identities = 104/170 (61%), Positives = 128/170 (75%)
 Frame = -3

Query: 514 VHDFSEDIVFINKEATSEALLALSSGFPADSLTXXXXXXXXXXXXXXXEQVNYILIRNHI 335
           V D +++I+ INKE+TSEALLAL++GFPAD LT               EQVNYI+IRNHI
Sbjct: 117 VPDVADEIIVINKESTSEALLALTAGFPADHLTEDEIDARVVSVIGGIEQVNYIIIRNHI 176

Query: 334 LTKWRENVSSWVCKDMFLGIIPPHCEPLLNSAYGFLLSHGYVNFGVAPAIRDKVFVEASK 155
           + KWRENVS+WV K+MF+  IP HC  L+++AY FL+SHGY+NFGVAPAI++K+  E SK
Sbjct: 177 IAKWRENVSNWVTKEMFIDSIPTHCHTLIDTAYNFLVSHGYINFGVAPAIKEKIPAEPSK 236

Query: 154 PNVIVIXXXXXXXXXARQLMAFGFKVIVLEGRKRAGGRVYTKKMQGGTKI 5
           P+VIVI         ARQLM FGFKV VLEGRKRAGGRVYTKKM+GG ++
Sbjct: 237 PSVIVIGAGLAGLAAARQLMRFGFKVTVLEGRKRAGGRVYTKKMEGGNRV 286


>ref|XP_004140213.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3-like
           [Cucumis sativus]
          Length = 982

 Score =  210 bits (534), Expect = 4e-52
 Identities = 104/170 (61%), Positives = 128/170 (75%)
 Frame = -3

Query: 514 VHDFSEDIVFINKEATSEALLALSSGFPADSLTXXXXXXXXXXXXXXXEQVNYILIRNHI 335
           V D +++I+ INKE+TSEALLAL++GFPAD LT               EQVNYI+IRNHI
Sbjct: 117 VPDVADEIIVINKESTSEALLALTAGFPADHLTEDEIDARVVSVIGGIEQVNYIIIRNHI 176

Query: 334 LTKWRENVSSWVCKDMFLGIIPPHCEPLLNSAYGFLLSHGYVNFGVAPAIRDKVFVEASK 155
           + KWRENVS+WV K+MF+  IP HC  L+++AY FL+SHGY+NFGVAPAI++K+  E SK
Sbjct: 177 IAKWRENVSNWVTKEMFIDSIPTHCHTLIDTAYNFLVSHGYINFGVAPAIKEKIPAEPSK 236

Query: 154 PNVIVIXXXXXXXXXARQLMAFGFKVIVLEGRKRAGGRVYTKKMQGGTKI 5
           P+VIVI         ARQLM FGFKV VLEGRKRAGGRVYTKKM+GG ++
Sbjct: 237 PSVIVIGAGLAGLAAARQLMRFGFKVTVLEGRKRAGGRVYTKKMEGGNRV 286


>ref|XP_002529596.1| amine oxidase, putative [Ricinus communis]
           gi|223530929|gb|EEF32788.1| amine oxidase, putative
           [Ricinus communis]
          Length = 961

 Score =  200 bits (508), Expect = 4e-49
 Identities = 101/174 (58%), Positives = 126/174 (72%)
 Frame = -3

Query: 532 LEKNNTVHDFSEDIVFINKEATSEALLALSSGFPADSLTXXXXXXXXXXXXXXXEQVNYI 353
           L +   + D SE+I+ INKE+TSEAL+ALSSGFPADSLT               EQVNYI
Sbjct: 98  LTQQQPIPDISEEIIVINKESTSEALIALSSGFPADSLTEEEIEAGVVSVIGGIEQVNYI 157

Query: 352 LIRNHILTKWRENVSSWVCKDMFLGIIPPHCEPLLNSAYGFLLSHGYVNFGVAPAIRDKV 173
           LIRNHI+TKWREN ++W+ KDMFL  +P HC  LL+SAY +L+S G++NFGV+ +I+D++
Sbjct: 158 LIRNHIITKWRENFNTWITKDMFLNSVPKHCHGLLDSAYEYLVSRGFINFGVSQSIKDRI 217

Query: 172 FVEASKPNVIVIXXXXXXXXXARQLMAFGFKVIVLEGRKRAGGRVYTKKMQGGT 11
             E +K NVI+I         ARQLM FGFKV VLEGRKRAGGRVYTKKM+ G+
Sbjct: 218 PGELNKCNVIIIGAGLAGLAAARQLMRFGFKVTVLEGRKRAGGRVYTKKMESGS 271


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