BLASTX nr result
ID: Coptis21_contig00002489
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002489 (740 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus ... 186 4e-45 ref|XP_002304049.1| predicted protein [Populus trichocarpa] gi|2... 185 1e-44 ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containin... 184 1e-44 emb|CBI32330.3| unnamed protein product [Vitis vinifera] 184 2e-44 ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Me... 184 2e-44 >ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis] gi|223535995|gb|EEF37654.1| Speckle-type POZ protein, putative [Ricinus communis] Length = 500 Score = 186 bits (472), Expect = 4e-45 Identities = 91/93 (97%), Positives = 92/93 (98%) Frame = -1 Query: 659 QLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 480 +LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC Sbjct: 408 RLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 467 Query: 479 FIRGSVVRYVQLPPEGVDTDLLHDATRREARGG 381 FIRGSVVRYVQLPPEGVD DLLHDATRREARGG Sbjct: 468 FIRGSVVRYVQLPPEGVDIDLLHDATRREARGG 500 >ref|XP_002304049.1| predicted protein [Populus trichocarpa] gi|224118384|ref|XP_002331469.1| predicted protein [Populus trichocarpa] gi|118484877|gb|ABK94305.1| unknown [Populus trichocarpa] gi|222841481|gb|EEE79028.1| predicted protein [Populus trichocarpa] gi|222873547|gb|EEF10678.1| predicted protein [Populus trichocarpa] Length = 93 Score = 185 bits (469), Expect = 1e-44 Identities = 90/92 (97%), Positives = 91/92 (98%) Frame = -1 Query: 656 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 477 LFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF Sbjct: 2 LFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 61 Query: 476 IRGSVVRYVQLPPEGVDTDLLHDATRREARGG 381 IRGSVVRYVQLPPEGVD DLLHDATRREARGG Sbjct: 62 IRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93 >ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis vinifera] Length = 489 Score = 184 bits (468), Expect = 1e-44 Identities = 90/93 (96%), Positives = 92/93 (98%) Frame = -1 Query: 659 QLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 480 +LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC Sbjct: 397 RLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 456 Query: 479 FIRGSVVRYVQLPPEGVDTDLLHDATRREARGG 381 FIRGSVVRYVQLPPEGVD +LLHDATRREARGG Sbjct: 457 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 489 >emb|CBI32330.3| unnamed protein product [Vitis vinifera] Length = 137 Score = 184 bits (467), Expect = 2e-44 Identities = 90/92 (97%), Positives = 91/92 (98%) Frame = -1 Query: 656 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 477 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF Sbjct: 46 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 105 Query: 476 IRGSVVRYVQLPPEGVDTDLLHDATRREARGG 381 IRGSVVRYVQLPPEGVD +LLHDATRREARGG Sbjct: 106 IRGSVVRYVQLPPEGVDIELLHDATRREARGG 137 >ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Medicago truncatula] gi|355500846|gb|AES82049.1| SnRNP core Sm protein Sm-X5-like protein [Medicago truncatula] gi|388519597|gb|AFK47860.1| unknown [Lotus japonicus] Length = 93 Score = 184 bits (467), Expect = 2e-44 Identities = 90/92 (97%), Positives = 91/92 (98%) Frame = -1 Query: 656 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 477 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF Sbjct: 2 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 61 Query: 476 IRGSVVRYVQLPPEGVDTDLLHDATRREARGG 381 IRGSVVRYVQLPPEGVD +LLHDATRREARGG Sbjct: 62 IRGSVVRYVQLPPEGVDIELLHDATRREARGG 93