BLASTX nr result

ID: Coptis21_contig00002479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002479
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523034.1| conserved hypothetical protein [Ricinus comm...   103   3e-20
ref|XP_004168103.1| PREDICTED: uncharacterized LOC101208991 [Cuc...   101   2e-19
ref|XP_004150990.1| PREDICTED: uncharacterized protein LOC101208...   100   4e-19
ref|XP_003621784.1| Plant-specific domain TIGR01589 family prote...    99   1e-18
ref|XP_002282487.1| PREDICTED: uncharacterized protein LOC100267...    98   2e-18

>ref|XP_002523034.1| conserved hypothetical protein [Ricinus communis]
           gi|223537717|gb|EEF39338.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  103 bits (258), Expect = 3e-20
 Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -2

Query: 579 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRTVWXXXXXXXXXXXE 400
           MGDSSASYI MVQHLIEKCL+FHM ++ECM+ALSKHANI PVIT TVW           E
Sbjct: 1   MGDSSASYIHMVQHLIEKCLIFHMTKEECMEALSKHANITPVITSTVWNELEKENKEFFE 60

Query: 399 AYKKINR-EDQMSEAETTQKILQILSE 322
           AY +  R +D+MSE ET+Q I +++SE
Sbjct: 61  AYIESKRKDDRMSEEETSQMIQKMISE 87


>ref|XP_004168103.1| PREDICTED: uncharacterized LOC101208991 [Cucumis sativus]
          Length = 95

 Score =  101 bits (251), Expect = 2e-19
 Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
 Frame = -2

Query: 579 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRTVWXXXXXXXXXXXE 400
           M DSS+SYI MVQHLIEKCL+FHM ++ECMDALSKHA+IKP+IT TVW           E
Sbjct: 1   MADSSSSYIHMVQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWNELEKENKEFFE 60

Query: 399 AY-KKINREDQMSEAETTQKILQILSE 322
           AY +  N  D+MSE ET+Q I +++S+
Sbjct: 61  AYAQSHNNSDRMSEEETSQMIQKMISD 87


>ref|XP_004150990.1| PREDICTED: uncharacterized protein LOC101208991 [Cucumis sativus]
          Length = 95

 Score =  100 bits (248), Expect = 4e-19
 Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
 Frame = -2

Query: 579 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRTVWXXXXXXXXXXXE 400
           M DSS+SY+ MVQHLIEKCL+FHM ++ECMDALSKHA+IKP+IT TVW           E
Sbjct: 1   MADSSSSYMHMVQHLIEKCLIFHMTKEECMDALSKHADIKPIITSTVWNELEKENKEFFE 60

Query: 399 AY-KKINREDQMSEAETTQKILQILSE 322
           AY +  N  D+MSE ET+Q I +++S+
Sbjct: 61  AYAQSHNNSDRMSEEETSQMIQKMISD 87


>ref|XP_003621784.1| Plant-specific domain TIGR01589 family protein [Medicago
           truncatula] gi|355496799|gb|AES78002.1| Plant-specific
           domain TIGR01589 family protein [Medicago truncatula]
          Length = 102

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = -2

Query: 570 SSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRTVWXXXXXXXXXXXEAY- 394
           SSASYI MVQHLIEKCL+FHM ++ECM+ALSKHANIKPVIT TVW           EAY 
Sbjct: 11  SSASYIHMVQHLIEKCLIFHMTKEECMEALSKHANIKPVITSTVWKELEKENKEFFEAYA 70

Query: 393 KKINREDQMSEAETTQKILQILSE 322
           K  +++++MSE ET Q + +I+S+
Sbjct: 71  KSKSKDERMSEEETNQMLQKIISD 94


>ref|XP_002282487.1| PREDICTED: uncharacterized protein LOC100267224 [Vitis vinifera]
           gi|296086933|emb|CBI33166.3| unnamed protein product
           [Vitis vinifera]
          Length = 93

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
 Frame = -2

Query: 579 MGDSSASYIRMVQHLIEKCLMFHMNEDECMDALSKHANIKPVITRTVWXXXXXXXXXXXE 400
           MGDSSASYI MVQHLIEKCL+FHM+++ECM+ALSKHA+I  VIT TVW           E
Sbjct: 1   MGDSSASYIHMVQHLIEKCLIFHMSKEECMEALSKHADINQVITSTVWNELEKENKEFFE 60

Query: 399 AY--KKINREDQMSEAETTQKILQILSE 322
           AY  +   R+D+MSEAET + I +++++
Sbjct: 61  AYHTQTQTRDDRMSEAETNEMIQKMIAD 88


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