BLASTX nr result

ID: Coptis21_contig00002476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002476
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28

>ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|222872225|gb|EEF09356.1|
           predicted protein [Populus trichocarpa]
          Length = 774

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/113 (59%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = -1

Query: 341 GSIGYAAPEYGMGADASTQGDVYSYGILVLEMSTGRRPTDEMFKDGLNLHNYASNGLQDQ 162
           G+IGYAAPEYG+G+D ST GDVYS+GIL+LEM TG+RPT+ MFKDGLNLHNYA   L  +
Sbjct: 626 GTIGYAAPEYGVGSDVSTYGDVYSFGILLLEMFTGKRPTEGMFKDGLNLHNYAEMALHGR 685

Query: 161 LIKIVDPILLSEGDDTLGDTYSMRIGSHRRT-KLLECMTAIVRIGVACSVESP 6
           + ++V+PILL E  D     +S    +H  T K+LEC+ +I++IGVACSVE P
Sbjct: 686 VSEVVEPILLRE--DVERSIHSSHRMNHIETGKILECLISIIKIGVACSVELP 736


>ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1|
            predicted protein [Populus trichocarpa]
          Length = 1025

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/114 (55%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
 Frame = -1

Query: 341  GSIGYAAPEYGMGADASTQGDVYSYGILVLEMSTGRRPTDEMFKDGLNLHNYASNGLQDQ 162
            G+IGYAAPEYG+G++ S  GDVYSYGIL+LE+ TGRRPTD +FKDGLNLHN+A   L   
Sbjct: 888  GTIGYAAPEYGLGSEVSPYGDVYSYGILLLEVFTGRRPTDGLFKDGLNLHNFAKTALPIS 947

Query: 161  LIKIVDPILLSEGDDTLGDT--YSMRIGSHRRTKLLECMTAIVRIGVACSVESP 6
            + +++DP+L++E ++T GD       IG+H     +EC+ AIV++GVACS E P
Sbjct: 948  VAEVLDPVLVTEAEETSGDASRRMSHIGNH-----MECLAAIVKVGVACSAEFP 996


>ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|222850886|gb|EEE88433.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  130 bits (328), Expect = 8e-29
 Identities = 62/114 (54%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
 Frame = -1

Query: 341  GSIGYAAPEYGMGADASTQGDVYSYGILVLEMSTGRRPTDEMFKDGLNLHNYASNGLQDQ 162
            G+IGYAAPEYG+G++ S  GDVYSYGIL+LE+ TGRRPT+ +FKDGLNLHN+A   L   
Sbjct: 886  GTIGYAAPEYGLGSEVSPYGDVYSYGILLLEVFTGRRPTNGLFKDGLNLHNFAKTALPIS 945

Query: 161  LIKIVDPILLSEGDDTLGDT--YSMRIGSHRRTKLLECMTAIVRIGVACSVESP 6
            + +++DP+L++E ++T GD       IG+H     +EC+ AIV++GVACS E P
Sbjct: 946  VAEVLDPVLVTEAEETSGDASRRMSHIGNH-----MECLAAIVKVGVACSAEFP 994


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/116 (56%), Positives = 88/116 (75%), Gaps = 4/116 (3%)
 Frame = -1

Query: 341  GSIGYAAPEYGMGADASTQGDVYSYGILVLEMSTGRRPTDEMFKDGLNLHNYASNGLQDQ 162
            G+IGYAAPEYGMG++ ST GDVYSYGIL+LEM TG+RPTD MFKD +NLHN+A     ++
Sbjct: 888  GTIGYAAPEYGMGSEVSTFGDVYSYGILLLEMFTGKRPTDTMFKDEMNLHNFAKMASPNR 947

Query: 161  LIKIVDPILLSEGDDTLGD---TYSMRIGSHRRT-KLLECMTAIVRIGVACSVESP 6
            + +I+DP L+ E ++T  D   T S R  +H  T K++EC+  I+++GVAC+VESP
Sbjct: 948  VTEILDPALVREAEETSADHASTSSAR--NHNGTEKIMECLVLIIKVGVACAVESP 1001


>ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|222873889|gb|EEF11020.1|
            predicted protein [Populus trichocarpa]
          Length = 1021

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/112 (53%), Positives = 80/112 (71%)
 Frame = -1

Query: 341  GSIGYAAPEYGMGADASTQGDVYSYGILVLEMSTGRRPTDEMFKDGLNLHNYASNGLQDQ 162
            G+IGYA PEYG+G + S  GD YSYGIL+LEM TG+RPTDEMF++G NLHN+    + +Q
Sbjct: 878  GTIGYAPPEYGVGGEVSAYGDTYSYGILLLEMFTGKRPTDEMFREGSNLHNFVKRAVPEQ 937

Query: 161  LIKIVDPILLSEGDDTLGDTYSMRIGSHRRTKLLECMTAIVRIGVACSVESP 6
            + +I DP LL E  +  GD     I S R ++ LEC+ +I+RIG++CSVE P
Sbjct: 938  VKQITDPTLLQE--EPTGDDDKHEISSMRNSRPLECLNSILRIGISCSVEFP 987


Top