BLASTX nr result

ID: Coptis21_contig00002474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002474
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42699.1|METE_CATRO RecName: Full=5-methyltetrahydropteroyltr...   333   9e-90
ref|XP_002325856.1| vitamin-b12 independent methionine synthase,...   329   2e-88
gb|AEO86798.1| methionine synthase [Camellia sinensis]                328   5e-88
gb|ABS01352.1| methionine synthase [Carica papaya]                    327   1e-87
ref|XP_003561625.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...   326   1e-87

>sp|Q42699.1|METE_CATRO RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase; AltName: Full=Cobalamin-independent
           methionine synthase isozyme; AltName:
           Full=Vitamin-B12-independent methionine synthase isozyme
           gi|886471|emb|CAA58474.1| methionine synthase
           [Catharanthus roseus]
          Length = 765

 Score =  333 bits (855), Expect = 9e-90
 Identities = 163/191 (85%), Positives = 181/191 (94%)
 Frame = -1

Query: 574 HKAVTEYKEAKQLGIDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIGKILPIYKEVVAE 395
           HKAV EYKEAK+LG+DTVPVLVGPV++LLLSKPAKGVEK+F LLSL+ KILP+YKEV+ E
Sbjct: 135 HKAVNEYKEAKELGVDTVPVLVGPVTFLLLSKPAKGVEKTFPLLSLLDKILPVYKEVIGE 194

Query: 394 LKAAGASWIQFDEPTLVKDLEPHQLQAFTSTYAELESSLTGLNVLIETYFADIPAETYKT 215
           LKAAGASWIQFDEPTLV DLE HQL+AFT  Y+ELES+L+GLNV++ETYFADIPAETYK 
Sbjct: 195 LKAAGASWIQFDEPTLVLDLESHQLEAFTKAYSELESTLSGLNVIVETYFADIPAETYKI 254

Query: 214 LTALKGVTGFGFDFIRGSKTLDLIKGGFPSGKYLFAGLVDGRNIWANDLAASLSTLQALE 35
           LTALKGVTGFGFD +RG+KTLDLIKGGFPSGKYLFAG+VDGRNIWANDLAASLSTLQ+LE
Sbjct: 255 LTALKGVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSTLQSLE 314

Query: 34  GIVGKDKLVVS 2
           GIVGKDKLVVS
Sbjct: 315 GIVGKDKLVVS 325


>ref|XP_002325856.1| vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa] gi|222862731|gb|EEF00238.1|
           vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa]
          Length = 765

 Score =  329 bits (844), Expect = 2e-88
 Identities = 163/191 (85%), Positives = 177/191 (92%)
 Frame = -1

Query: 574 HKAVTEYKEAKQLGIDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIGKILPIYKEVVAE 395
           HKAVTEYKEAK LG+DTVPVL+GPVSYLLLSKPAKGVEKSFSLLSL+GKILPIYKEV++E
Sbjct: 135 HKAVTEYKEAKALGVDTVPVLIGPVSYLLLSKPAKGVEKSFSLLSLLGKILPIYKEVISE 194

Query: 394 LKAAGASWIQFDEPTLVKDLEPHQLQAFTSTYAELESSLTGLNVLIETYFADIPAETYKT 215
           LK AGASWIQFDEPTLV DLE H+LQAFT  Y+ LES+L+GLNVLIETYFADIPAE YKT
Sbjct: 195 LKEAGASWIQFDEPTLVMDLESHKLQAFTGAYSALESTLSGLNVLIETYFADIPAEQYKT 254

Query: 214 LTALKGVTGFGFDFIRGSKTLDLIKGGFPSGKYLFAGLVDGRNIWANDLAASLSTLQALE 35
           LT+LKGVT FGFD +RG+KTLDLIKG FP GKYLFAG+VDGRNIWANDLAAS STL+ LE
Sbjct: 255 LTSLKGVTAFGFDLVRGTKTLDLIKGDFPKGKYLFAGVVDGRNIWANDLAASFSTLETLE 314

Query: 34  GIVGKDKLVVS 2
           GIVGKDKLVVS
Sbjct: 315 GIVGKDKLVVS 325


>gb|AEO86798.1| methionine synthase [Camellia sinensis]
          Length = 765

 Score =  328 bits (840), Expect = 5e-88
 Identities = 163/191 (85%), Positives = 179/191 (93%)
 Frame = -1

Query: 574 HKAVTEYKEAKQLGIDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIGKILPIYKEVVAE 395
           HKAV EYKEAK LG+DTVPVLVGPVSYLLLSKPAKGVEKSFSLLSL+ KILPIYKEVVAE
Sbjct: 135 HKAVDEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLLDKILPIYKEVVAE 194

Query: 394 LKAAGASWIQFDEPTLVKDLEPHQLQAFTSTYAELESSLTGLNVLIETYFADIPAETYKT 215
           LKAAGASWIQFDEPTLVKDLE HQLQAFT+ Y+ELES+L+GLNV++ETYFAD+PAE +KT
Sbjct: 195 LKAAGASWIQFDEPTLVKDLESHQLQAFTAAYSELESALSGLNVIVETYFADVPAEAFKT 254

Query: 214 LTALKGVTGFGFDFIRGSKTLDLIKGGFPSGKYLFAGLVDGRNIWANDLAASLSTLQALE 35
           LT+LK VTGFGFD +RG++TLDLI  GFPSG+YLFAG+VDGRNIWANDLAASLS LQ LE
Sbjct: 255 LTSLKCVTGFGFDLVRGAQTLDLITSGFPSGEYLFAGVVDGRNIWANDLAASLSLLQTLE 314

Query: 34  GIVGKDKLVVS 2
           GIVGKDKLVVS
Sbjct: 315 GIVGKDKLVVS 325


>gb|ABS01352.1| methionine synthase [Carica papaya]
          Length = 765

 Score =  327 bits (837), Expect = 1e-87
 Identities = 159/191 (83%), Positives = 179/191 (93%)
 Frame = -1

Query: 574 HKAVTEYKEAKQLGIDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIGKILPIYKEVVAE 395
           HKAVTEYKEAK LG+DTVPVLVGPVSYLLLSKPAKGVEK+FSLLSL+ KILP+YKEV++E
Sbjct: 135 HKAVTEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKTFSLLSLLNKILPVYKEVISE 194

Query: 394 LKAAGASWIQFDEPTLVKDLEPHQLQAFTSTYAELESSLTGLNVLIETYFADIPAETYKT 215
           LKAAGASWIQFDEPTLV DL+ H+LQAFT  Y+ELES+L+GL+VLIETYFAD+PAE YKT
Sbjct: 195 LKAAGASWIQFDEPTLVLDLDAHKLQAFTDAYSELESTLSGLSVLIETYFADVPAEAYKT 254

Query: 214 LTALKGVTGFGFDFIRGSKTLDLIKGGFPSGKYLFAGLVDGRNIWANDLAASLSTLQALE 35
           LT LKGVTG+GFD +RG+KTLDLIKGGFP GKYLF+G+VDGRNIWANDLA+SLSTLQ LE
Sbjct: 255 LTGLKGVTGYGFDLVRGTKTLDLIKGGFPKGKYLFSGVVDGRNIWANDLASSLSTLQELE 314

Query: 34  GIVGKDKLVVS 2
           GIVGK+ LVVS
Sbjct: 315 GIVGKENLVVS 325


>ref|XP_003561625.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase-like [Brachypodium distachyon]
          Length = 766

 Score =  326 bits (836), Expect = 1e-87
 Identities = 162/192 (84%), Positives = 180/192 (93%), Gaps = 1/192 (0%)
 Frame = -1

Query: 574 HKAVTEYKEAKQLGIDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIGKILPIYKEVVAE 395
           HKAV+EYKEAK LG+DTVPVLVGPVSYLLLSKPAKGVEKSFSLLSL+G ILPIYKEV+AE
Sbjct: 135 HKAVSEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFSLLSLVGSILPIYKEVIAE 194

Query: 394 LKAAGASWIQFDEPTLVKDLEPHQLQAFTSTYAELESSLTGLNVLIETYFADIPAETYKT 215
           LKAAGASWIQFDEPTLVKDL+ HQL AFTS Y +LESSL+GLNVLIETYFAD+PAE+YKT
Sbjct: 195 LKAAGASWIQFDEPTLVKDLDAHQLAAFTSAYTDLESSLSGLNVLIETYFADVPAESYKT 254

Query: 214 LTALKGVTGFGFDFIRGSKTLDLIKG-GFPSGKYLFAGLVDGRNIWANDLAASLSTLQAL 38
           LT+L GVT +GFD +RG+KTLDL+K  GFPSGKYLFAG+VDGRNIWA+DLAASLSTLQ+L
Sbjct: 255 LTSLSGVTAYGFDLVRGTKTLDLVKSVGFPSGKYLFAGVVDGRNIWADDLAASLSTLQSL 314

Query: 37  EGIVGKDKLVVS 2
           E +VGKDKLVVS
Sbjct: 315 EAVVGKDKLVVS 326


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