BLASTX nr result
ID: Coptis21_contig00002473
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002473 (528 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|2... 187 6e-46 gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK... 187 6e-46 ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|1... 187 1e-45 ref|XP_002516050.1| 60S ribosomal protein L37, putative [Ricinus... 184 5e-45 ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus... 184 5e-45 >ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|222866254|gb|EEF03385.1| predicted protein [Populus trichocarpa] Length = 112 Score = 187 bits (476), Expect = 6e-46 Identities = 87/95 (91%), Positives = 91/95 (95%) Frame = -3 Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWS KAIRRKTTG Sbjct: 17 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTG 76 Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAAS 194 TGRMKY+RHLPRRFK+NFREGT AAPR KG AAAS Sbjct: 77 TGRMKYLRHLPRRFKTNFREGTQAAPRNKGAAAAS 111 >gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK94875.1| unknown [Populus trichocarpa] Length = 96 Score = 187 bits (476), Expect = 6e-46 Identities = 87/95 (91%), Positives = 91/95 (95%) Frame = -3 Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWS KAIRRKTTG Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTG 60 Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAAS 194 TGRMKY+RHLPRRFK+NFREGT AAPR KG AAAS Sbjct: 61 TGRMKYLRHLPRRFKTNFREGTQAAPRNKGAAAAS 95 >ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|118482197|gb|ABK93027.1| unknown [Populus trichocarpa] gi|222855546|gb|EEE93093.1| predicted protein [Populus trichocarpa] Length = 94 Score = 187 bits (474), Expect = 1e-45 Identities = 86/94 (91%), Positives = 90/94 (95%) Frame = -3 Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWSVKAIRRKTTG Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSVKAIRRKTTG 60 Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAA 197 TGRMKY+RHLPRRFK+NFREGT A PR KG AAA Sbjct: 61 TGRMKYLRHLPRRFKTNFREGTQATPRNKGAAAA 94 >ref|XP_002516050.1| 60S ribosomal protein L37, putative [Ricinus communis] gi|223544955|gb|EEF46470.1| 60S ribosomal protein L37, putative [Ricinus communis] Length = 96 Score = 184 bits (468), Expect = 5e-45 Identities = 87/95 (91%), Positives = 89/95 (93%) Frame = -3 Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAAR R YNWSVKAIRRKTTG Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRSYNWSVKAIRRKTTG 60 Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAAS 194 TGRM+Y+RHLPRRFKS FREGT AAPR KG AAAS Sbjct: 61 TGRMRYLRHLPRRFKSGFREGTEAAPRKKGAAAAS 95 >ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus communis] gi|223544399|gb|EEF45920.1| 60S ribosomal protein L37, putative [Ricinus communis] Length = 96 Score = 184 bits (468), Expect = 5e-45 Identities = 84/95 (88%), Positives = 91/95 (95%) Frame = -3 Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPA+R+RKYNWSVKAIRRKTTG Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRLRKYNWSVKAIRRKTTG 60 Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAAS 194 TGRM+Y+RH+PRRFK+NFREGT A PR KG AAA+ Sbjct: 61 TGRMRYLRHVPRRFKTNFREGTQAPPRNKGAAAAT 95