BLASTX nr result

ID: Coptis21_contig00002473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002473
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK...   187   6e-46
ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|1...   187   1e-45
ref|XP_002516050.1| 60S ribosomal protein L37, putative [Ricinus...   184   5e-45
ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus...   184   5e-45

>ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|222866254|gb|EEF03385.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  187 bits (476), Expect = 6e-46
 Identities = 87/95 (91%), Positives = 91/95 (95%)
 Frame = -3

Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWS KAIRRKTTG
Sbjct: 17  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTG 76

Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAAS 194
           TGRMKY+RHLPRRFK+NFREGT AAPR KG AAAS
Sbjct: 77  TGRMKYLRHLPRRFKTNFREGTQAAPRNKGAAAAS 111


>gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK94875.1| unknown
           [Populus trichocarpa]
          Length = 96

 Score =  187 bits (476), Expect = 6e-46
 Identities = 87/95 (91%), Positives = 91/95 (95%)
 Frame = -3

Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWS KAIRRKTTG
Sbjct: 1   MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTG 60

Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAAS 194
           TGRMKY+RHLPRRFK+NFREGT AAPR KG AAAS
Sbjct: 61  TGRMKYLRHLPRRFKTNFREGTQAAPRNKGAAAAS 95


>ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|118482197|gb|ABK93027.1|
           unknown [Populus trichocarpa]
           gi|222855546|gb|EEE93093.1| predicted protein [Populus
           trichocarpa]
          Length = 94

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/94 (91%), Positives = 90/94 (95%)
 Frame = -3

Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR+RKYNWSVKAIRRKTTG
Sbjct: 1   MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSVKAIRRKTTG 60

Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAA 197
           TGRMKY+RHLPRRFK+NFREGT A PR KG AAA
Sbjct: 61  TGRMKYLRHLPRRFKTNFREGTQATPRNKGAAAA 94


>ref|XP_002516050.1| 60S ribosomal protein L37, putative [Ricinus communis]
           gi|223544955|gb|EEF46470.1| 60S ribosomal protein L37,
           putative [Ricinus communis]
          Length = 96

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/95 (91%), Positives = 89/95 (93%)
 Frame = -3

Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAAR R YNWSVKAIRRKTTG
Sbjct: 1   MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRSYNWSVKAIRRKTTG 60

Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAAS 194
           TGRM+Y+RHLPRRFKS FREGT AAPR KG AAAS
Sbjct: 61  TGRMRYLRHLPRRFKSGFREGTEAAPRKKGAAAAS 95


>ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus communis]
           gi|223544399|gb|EEF45920.1| 60S ribosomal protein L37,
           putative [Ricinus communis]
          Length = 96

 Score =  184 bits (468), Expect = 5e-45
 Identities = 84/95 (88%), Positives = 91/95 (95%)
 Frame = -3

Query: 478 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARIRKYNWSVKAIRRKTTG 299
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPA+R+RKYNWSVKAIRRKTTG
Sbjct: 1   MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRLRKYNWSVKAIRRKTTG 60

Query: 298 TGRMKYMRHLPRRFKSNFREGTVAAPRTKGVAAAS 194
           TGRM+Y+RH+PRRFK+NFREGT A PR KG AAA+
Sbjct: 61  TGRMRYLRHVPRRFKTNFREGTQAPPRNKGAAAAT 95


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