BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002471
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515415.1| pentatricopeptide repeat-containing protein,...   127   1e-27
ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]   115   4e-24
ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/99 (64%), Positives = 72/99 (72%)
 Frame = -2

Query: 307 GYIGDNYTFPVLLKAAGRLSPSHIGSVLHGQIMKSGFWIHDFVQTALLNFYSTLGRVEDG 128
           G+  DNYTFP+LLKAAGR+  S IG  LHGQ +K+GF  H FVQTAL+N Y  L  + D 
Sbjct: 45  GFHADNYTFPILLKAAGRICASKIGFALHGQTIKTGFCAHAFVQTALVNMYGNLHCIGDA 104

Query: 127 FKVFEDMTRKDSIAWNSMLDAYASAGQMDNAVNLFSLMP 11
           FKVFE M  KD IAWNSMLDAYAS  QMD A NLF+ MP
Sbjct: 105 FKVFEIMPVKDLIAWNSMLDAYASNAQMDYASNLFNSMP 143


>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 517

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/99 (60%), Positives = 69/99 (69%)
 Frame = -2

Query: 307 GYIGDNYTFPVLLKAAGRLSPSHIGSVLHGQIMKSGFWIHDFVQTALLNFYSTLGRVEDG 128
           G+  DN+TFPVLLKAA  LS   IG  LHGQ MK+GF  H FV TALL+ YS  G ++  
Sbjct: 49  GFDADNFTFPVLLKAASSLSSCCIGFALHGQAMKTGFSGHCFVGTALLDMYSAFGAIDHA 108

Query: 127 FKVFEDMTRKDSIAWNSMLDAYASAGQMDNAVNLFSLMP 11
            KVFE+M  KD + WNSML AYAS GQMDNA+ LF  MP
Sbjct: 109 TKVFEEMGVKDVVVWNSMLAAYASCGQMDNAMKLFDNMP 147


>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
          Length = 1302

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/99 (59%), Positives = 68/99 (68%)
 Frame = -2

Query: 307  GYIGDNYTFPVLLKAAGRLSPSHIGSVLHGQIMKSGFWIHDFVQTALLNFYSTLGRVEDG 128
            G+  DN+TFPVLLKAA  LS   IG  LHGQ MK+GF  H FV TALL+ Y   G ++  
Sbjct: 853  GFHADNFTFPVLLKAASSLSSCCIGFALHGQAMKTGFSGHCFVGTALLDMYXAFGAIDHA 912

Query: 127  FKVFEDMTRKDSIAWNSMLDAYASAGQMDNAVNLFSLMP 11
             KVFE+M  KD + WNSML AYAS GQMDNA+ LF  MP
Sbjct: 913  TKVFEEMGVKDVVVWNSMLAAYASXGQMDNAMKLFDNMP 951


>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/99 (58%), Positives = 70/99 (70%)
 Frame = -2

Query: 307 GYIGDNYTFPVLLKAAGRLSPSHIGSVLHGQIMKSGFWIHDFVQTALLNFYSTLGRVEDG 128
           G+  DN+TFP+LLKAAG  S   IG  LHGQ +K+GF  H FVQTALLN Y +   V D 
Sbjct: 45  GFHADNFTFPILLKAAGSWSSPCIGLALHGQTIKAGFSSHVFVQTALLNMYRSHSCVADA 104

Query: 127 FKVFEDMTRKDSIAWNSMLDAYASAGQMDNAVNLFSLMP 11
            KVFE M  KD +AWNS+LDAYAS  QMD+A+ +F+ MP
Sbjct: 105 CKVFEKMPVKDVVAWNSILDAYASTDQMDDALKVFNSMP 143


>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 39/95 (41%), Positives = 62/95 (65%)
 Frame = -2

Query: 292 NYTFPVLLKAAGRLSPSHIGSVLHGQIMKSGFWIHDFVQTALLNFYSTLGRVEDGFKVFE 113
           +YTFP L+KA G +S       +HG + ++GF  H FVQT+L++FYS++GR+E+  +VF+
Sbjct: 80  SYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFD 139

Query: 112 DMTRKDSIAWNSMLDAYASAGQMDNAVNLFSLMPE 8
           +M  +D  AW +M+      G M +A  LF +MP+
Sbjct: 140 EMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPD 174