BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002438
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19279.3| unnamed protein product [Vitis vinifera]               87   1e-14
ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding prote...    87   1e-14
ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding prote...    82   4e-13
ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding prote...    81   5e-13
gb|ACU19095.1| unknown [Glycine max]                                   81   5e-13

>emb|CBI19279.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 45/72 (62%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = +1

Query: 4   YSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPSGAEAKRSGSCQLTVLPSKRE 183
           +SCTV+IGGI+YIGAAARTKKEAEIKAARTALLAI++N  G   K  G+ QLTV+P K++
Sbjct: 134 FSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIRANTDGVGEKSIGNTQLTVIPGKKK 193

Query: 184 -PVIKKEEKPLK 216
            P     ++P K
Sbjct: 194 GPESGNPDEPAK 205


>ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding protein 1 [Vitis vinifera]
           gi|147781065|emb|CAN68128.1| hypothetical protein
           VITISV_043706 [Vitis vinifera]
          Length = 400

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 45/72 (62%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = +1

Query: 4   YSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPSGAEAKRSGSCQLTVLPSKRE 183
           +SCTV+IGGI+YIGAAARTKKEAEIKAARTALLAI++N  G   K  G+ QLTV+P K++
Sbjct: 134 FSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIRANTDGVGEKSIGNTQLTVIPGKKK 193

Query: 184 -PVIKKEEKPLK 216
            P     ++P K
Sbjct: 194 GPESGNPDEPAK 205


>ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
 Frame = +1

Query: 4   YSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPSGAEAKRSGSCQLTVLPSKRE 183
           +SCTVDIGGI YIG AA+TKKEAEIKAARTALLAIQS+ S A   + G  QLTVLP ++ 
Sbjct: 134 FSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASHASENQVGHPQLTVLPCRKR 193

Query: 184 -----PVIKKEEKPLKP 219
                 +  +   P KP
Sbjct: 194 ATSSVAIADENSNPPKP 210


>ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
 Frame = +1

Query: 4   YSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPSGAEAKRSGSCQLTVLPSKRE 183
           +SCTVDIGGI YIG AA+TKKEAEIKAARTALLAIQS+ S A   + G  QLTVLP ++ 
Sbjct: 134 FSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQASQDQVGHPQLTVLPCRKR 193

Query: 184 -----PVIKKEEKPLKP 219
                 +  +   P KP
Sbjct: 194 ATESVAIADENSNPPKP 210


>gb|ACU19095.1| unknown [Glycine max]
          Length = 359

 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
 Frame = +1

Query: 4   YSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPSGAEAKRSGSCQLTVLPSKRE 183
           +SCTVDIGGI YIG AA+TKKEAEIKAARTALLAIQS+ S A   + G  QLTVLP ++ 
Sbjct: 134 FSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQASQDQVGHPQLTVLPCRKR 193

Query: 184 -----PVIKKEEKPLKP 219
                 +  +   P KP
Sbjct: 194 ATESVAIADENSNPPKP 210