BLASTX nr result
ID: Coptis21_contig00002434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002434
(2040 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Viti... 801 0.0
ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Viti... 793 0.0
ref|XP_002313564.1| histone deacetylase [Populus trichocarpa] gi... 783 0.0
ref|XP_002868833.1| hypothetical protein ARALYDRAFT_327775 [Arab... 776 0.0
dbj|BAJ33721.1| unnamed protein product [Thellungiella halophila] 777 0.0
>ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
Length = 502
Score = 801 bits (2070), Expect(2) = 0.0
Identities = 384/444 (86%), Positives = 400/444 (90%), Gaps = 1/444 (0%)
Frame = -3
Query: 1900 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1721
M+ GGNSLPSG DGVKRK+SYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1 MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60
Query: 1720 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 1541
VLKPFPARDRDLCRFHADDYV+FLR ITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61 VLKPFPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 1540 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKQHERVLY 1361
YAGGSVGGAVKLNHGLCDIA+NWAGGLHHAKKCEASGFCYVNDIVL ILELLKQHERVLY
Sbjct: 121 YAGGSVGGAVKLNHGLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
Query: 1360 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 1181
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G GKGKYYSLNVPLDDGI
Sbjct: 181 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYSLNVPLDDGI 240
Query: 1180 DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 1001
DDE+Y LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
Sbjct: 241 DDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 300
Query: 1000 VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 821
VPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNMEN
Sbjct: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360
Query: 820 KNSRQLLEEIRVKLLDNLSKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 644
KNS Q+L+EIR KLLDNLSKLRHAPSVQFQER DME
Sbjct: 361 KNSHQILDEIRAKLLDNLSKLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPESDMEV 420
Query: 643 DTERKPLSNNLQNANVKREVIEPE 572
D E KPL + VKRE++EPE
Sbjct: 421 DEEHKPLP-----SRVKREIVEPE 439
Score = 68.6 bits (166), Expect(2) = 0.0
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = -2
Query: 500 DDQKGVALHGEGTDRMADDTSCARVLDIGSMSIEEPLSAKVEQESLNKSSDQPVPMYTKP 321
DD+KGVA H G D A++T+C++ D+ M I+EP + KVEQE+LNK DQPV MY KP
Sbjct: 444 DDKKGVAEHSRGFDTAAEETACSKASDVCPMPIDEP-NVKVEQENLNKPFDQPVQMYPKP 502
>ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
gi|296087188|emb|CBI33562.3| unnamed protein product
[Vitis vinifera]
Length = 502
Score = 793 bits (2047), Expect(2) = 0.0
Identities = 381/444 (85%), Positives = 396/444 (89%), Gaps = 1/444 (0%)
Frame = -3
Query: 1900 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1721
M+ GGNSLPSG DGVKRK+SYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1 MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60
Query: 1720 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 1541
VLKP PARDRDLCRFHADDYV+FLR ITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61 VLKPCPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 1540 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKQHERVLY 1361
YAGGSVGGAVKLNHG CDIAINWAGGLHHAKKCEASGFCYVNDIVL ILELLKQHERVLY
Sbjct: 121 YAGGSVGGAVKLNHGFCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
Query: 1360 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 1181
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G GKGKYYSLNVPLDDGI
Sbjct: 181 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYSLNVPLDDGI 240
Query: 1180 DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 1001
DDE+Y LFKPI+GKVME+FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVR+MRSFN
Sbjct: 241 DDESYHCLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFN 300
Query: 1000 VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 821
VPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNMEN
Sbjct: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360
Query: 820 KNSRQLLEEIRVKLLDNLSKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 644
KNS QLL+EIR KLLDNLS LRHAPSVQFQER DME
Sbjct: 361 KNSHQLLDEIRAKLLDNLSTLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPDSDMEI 420
Query: 643 DTERKPLSNNLQNANVKREVIEPE 572
D ERK L VKRE++EPE
Sbjct: 421 DDERKSLP-----GRVKREIVEPE 439
Score = 64.3 bits (155), Expect(2) = 0.0
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = -2
Query: 500 DDQKGVALHGEGTDRMADDTSCARVLDIGSMSIEEPLSAKVEQESLNKSSDQPVPMYTK 324
+D+KGVA H G D A++T+C++ D+ M I+EP S KVEQESLNK DQP P + K
Sbjct: 444 EDKKGVAEHSRGFDTTAEETACSKASDVCPMPIDEP-SVKVEQESLNKPFDQPAPTFPK 501
>ref|XP_002313564.1| histone deacetylase [Populus trichocarpa] gi|118486921|gb|ABK95294.1|
unknown [Populus trichocarpa] gi|222849972|gb|EEE87519.1|
histone deacetylase [Populus trichocarpa]
Length = 499
Score = 783 bits (2022), Expect(2) = 0.0
Identities = 378/445 (84%), Positives = 397/445 (89%), Gaps = 2/445 (0%)
Frame = -3
Query: 1900 MEIGGNSLPSG-PDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 1724
M+ GGNSLPS PDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
Sbjct: 1 MDTGGNSLPSAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 60
Query: 1723 QVLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQ 1544
QVLKPFPARDRDLCRFHADDYV+FLRSITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQ
Sbjct: 61 QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ 120
Query: 1543 TYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKQHERVL 1364
TYAGGSVGGAVKLNH LCDIA+NWAGGLHHAKKCEASGFCYVNDIVL ILELLK HERVL
Sbjct: 121 TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL 180
Query: 1363 YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDG 1184
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G KGKYYSLNVPLDDG
Sbjct: 181 YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFSKGKYYSLNVPLDDG 240
Query: 1183 IDDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSF 1004
IDDE+Y LFKP++GKVMEVF+PGAVVLQCGADSLSGDRLGCFNLSIKGHAECV+YMRSF
Sbjct: 241 IDDESYHFLFKPLIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSF 300
Query: 1003 NVPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNME 824
NVPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNME
Sbjct: 301 NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME 360
Query: 823 NKNSRQLLEEIRVKLLDNLSKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME 644
NKNS QLLEEIR KLLDNLSKL+HAPSVQFQER DM+
Sbjct: 361 NKNSFQLLEEIRSKLLDNLSKLQHAPSVQFQERPPDTELLEAEEDQDDADERWDPDSDMD 420
Query: 643 -DTERKPLSNNLQNANVKREVIEPE 572
D ERKPL + VKRE++E E
Sbjct: 421 VDDERKPLP-----SRVKREIVEAE 440
Score = 45.4 bits (106), Expect(2) = 0.0
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = -2
Query: 500 DDQKGVALHGEGTDRMADDTSCARVLDIGSMSIEEPLSAKVEQESLNKSSDQPVPMYTK 324
+ QKG + + G D D+ + + LD G M I+EP +VEQE++NK SDQ +Y+K
Sbjct: 445 EGQKGSSEYARGFDAAIDENASGKALDAGPMQIDEP-GVRVEQENVNKHSDQ---LYSK 499
>ref|XP_002868833.1| hypothetical protein ARALYDRAFT_327775 [Arabidopsis lyrata subsp.
lyrata] gi|297314669|gb|EFH45092.1| hypothetical protein
ARALYDRAFT_327775 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 776 bits (2003), Expect(2) = 0.0
Identities = 369/444 (83%), Positives = 396/444 (89%), Gaps = 1/444 (0%)
Frame = -3
Query: 1900 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1721
M+ GGNSL SGPDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1 MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60
Query: 1720 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 1541
VLKPFPARDRDLCRFHADDYV+FLRSITPETQQDQ+RQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61 VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 1540 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKQHERVLY 1361
YAGGSVGG+VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVL ILELLKQHERVLY
Sbjct: 121 YAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
Query: 1360 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 1181
VDIDIHHGDGVEEAFY TDRVMTVSFHKFGDYFPGTG ++D+G+G GKYYSLNVPLDDGI
Sbjct: 181 VDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGNGKYYSLNVPLDDGI 240
Query: 1180 DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 1001
DDE+Y LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECV++MRSFN
Sbjct: 241 DDESYHLLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
Query: 1000 VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 821
VPLLL+GGGGYTIRNVARCWCYETGVALG+EV+DKMP+HEYYEYFGPDY LHVAPSNMEN
Sbjct: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMEN 360
Query: 820 KNSRQLLEEIRVKLLDNLSKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 644
KNSRQ+LEEIR LL NLSKL+HAPSV FQER DM+
Sbjct: 361 KNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTEAPEVDEDQEDGDKRWDPDSDMDV 420
Query: 643 DTERKPLSNNLQNANVKREVIEPE 572
D +RKP+ + VKRE +EP+
Sbjct: 421 DDDRKPIP-----SRVKREAVEPD 439
Score = 32.3 bits (72), Expect(2) = 0.0
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -2
Query: 500 DDQKGVALHGEGTDRMADDTSCARVLDIGSMSIEEPLSAKVEQESLNK-SSDQPVP 336
D KGV G+G + D++ ++V + + +EE S K+E+E NK +DQ P
Sbjct: 444 DGLKGVMERGKGCEVGVDESGSSKVTGVNPVGMEE-ASVKMEEEGTNKGGADQVFP 498
>dbj|BAJ33721.1| unnamed protein product [Thellungiella halophila]
Length = 500
Score = 777 bits (2006), Expect(2) = 0.0
Identities = 370/444 (83%), Positives = 396/444 (89%), Gaps = 1/444 (0%)
Frame = -3
Query: 1900 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1721
M+ GGNSL SGPDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1 MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60
Query: 1720 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 1541
VLKPFPARDRDLCRFHADDYV+FLRSITPETQQDQ+RQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61 VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 1540 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKQHERVLY 1361
YAGGSVGG+VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVL ILELLKQHERVLY
Sbjct: 121 YAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
Query: 1360 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 1181
VDIDIHHGDGVEEAFY+TDRVMTVSFHKFGDYFPGTG ++D+G+G GKYYSLNVPLDDGI
Sbjct: 181 VDIDIHHGDGVEEAFYSTDRVMTVSFHKFGDYFPGTGHIQDIGYGNGKYYSLNVPLDDGI 240
Query: 1180 DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 1001
DDE+Y LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECV++MRSFN
Sbjct: 241 DDESYHLLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
Query: 1000 VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 821
VPLLL+GGGGYTIRNVARCWCYETGVALG+EVDDKMP+HEYYEYFGPDY LHVAPSNMEN
Sbjct: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPEHEYYEYFGPDYTLHVAPSNMEN 360
Query: 820 KNSRQLLEEIRVKLLDNLSKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 644
KNSRQ+LE IR LL NLSKL+HAPSV FQER DM+
Sbjct: 361 KNSRQMLEVIRNDLLHNLSKLQHAPSVPFQERPPETEAPEVDEDQEDGDKRWDPDSDMDV 420
Query: 643 DTERKPLSNNLQNANVKREVIEPE 572
D +RKP+ N VKRE +EP+
Sbjct: 421 DDDRKPIPN-----RVKREAVEPD 439
Score = 30.8 bits (68), Expect(2) = 0.0
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -2
Query: 500 DDQKGVALHGEGTDRMADDTSCARVLDIGSMSIEEPLSAKVEQESLNKSS-DQPVP 336
D KGV G+G + D++ +V + ++ +EE S K+E+E +K+ DQ P
Sbjct: 444 DGLKGVMERGKGFEAGMDESGSTKVTGVNTVGMEE-ASVKMEEEGTSKAGVDQVFP 498