BLASTX nr result

ID: Coptis21_contig00002431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002431
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135046.1| PREDICTED: charged multivesicular body prote...   366   7e-99
ref|XP_002310998.1| predicted protein [Populus trichocarpa] gi|2...   361   2e-97
ref|XP_002518614.1| Charged multivesicular body protein, putativ...   360   5e-97
ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|2...   359   8e-97
ref|XP_002267799.2| PREDICTED: charged multivesicular body prote...   357   3e-96

>ref|XP_004135046.1| PREDICTED: charged multivesicular body protein 5-like [Cucumis
            sativus] gi|449522013|ref|XP_004168023.1| PREDICTED:
            charged multivesicular body protein 5-like [Cucumis
            sativus]
          Length = 237

 Score =  366 bits (939), Expect = 7e-99
 Identities = 189/237 (79%), Positives = 206/237 (86%), Gaps = 6/237 (2%)
 Frame = -1

Query: 1040 MRRVFGVKKEKEPPPSINDATDRISKRGESVDEKIKRLDGELSRYKEQIKKTRPGPAQEA 861
            M+RVFGVKK+KEPPPSI DA+DRI+KRGESVD+KIK+LD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1    MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 860  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMTALKSANKELKGMM 681
            VK+RAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFA+EGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61   VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 680  KTVKIQDIDSMQDEMMDLMDVSNEIQESLGRSYSVPXXXXXXXXXXXXXXXXXDMGMETE 501
            KTV+IQDID++QDEMMDLMDVSNEIQE+LGRSY+VP                 DMG ETE
Sbjct: 121  KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 500  SEGVPSYLQPDKESDYEAELNLPAAPSGHAVGP------QAEDELGLPAVPRASLRG 348
            ++GVPSYLQPDKESD+E ELNLPAAP GHA  P      QAEDELGLPAVP ASLRG
Sbjct: 181  ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPHASLRG 237


>ref|XP_002310998.1| predicted protein [Populus trichocarpa] gi|222850818|gb|EEE88365.1|
            predicted protein [Populus trichocarpa]
          Length = 236

 Score =  361 bits (926), Expect = 2e-97
 Identities = 185/236 (78%), Positives = 206/236 (87%), Gaps = 5/236 (2%)
 Frame = -1

Query: 1040 MRRVFGVKKEKEPPPSINDATDRISKRGESVDEKIKRLDGELSRYKEQIKKTRPGPAQEA 861
            M+RVFGVKK+KEPPPSI D++DRI+KRGE+VDEKIK+LD EL+RYKEQIK TRPGPAQEA
Sbjct: 1    MKRVFGVKKDKEPPPSIQDSSDRINKRGETVDEKIKKLDAELARYKEQIKNTRPGPAQEA 60

Query: 860  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMTALKSANKELKGMM 681
            VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFA+EGIKDAQQT++ALKSANKELKGMM
Sbjct: 61   VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTVSALKSANKELKGMM 120

Query: 680  KTVKIQDIDSMQDEMMDLMDVSNEIQESLGRSYSVPXXXXXXXXXXXXXXXXXDMGMETE 501
            KTVKIQDID++QDEMMDLMDVS+EIQE+LGRSYSVP                 DM METE
Sbjct: 121  KTVKIQDIDNLQDEMMDLMDVSSEIQETLGRSYSVPDDIDEEDLMGELDALEADMAMETE 180

Query: 500  SEGVPSYLQPDKESDYEAELNLPAAPSGHA-----VGPQAEDELGLPAVPRASLRG 348
            S+GVPSYLQPDKE D+++ELNLP+AP+GHA        QAEDELGLPAVPRASLRG
Sbjct: 181  SDGVPSYLQPDKEPDFDSELNLPSAPTGHAAPAGRANNQAEDELGLPAVPRASLRG 236


>ref|XP_002518614.1| Charged multivesicular body protein, putative [Ricinus communis]
            gi|223542213|gb|EEF43756.1| Charged multivesicular body
            protein, putative [Ricinus communis]
          Length = 237

 Score =  360 bits (923), Expect = 5e-97
 Identities = 182/237 (76%), Positives = 206/237 (86%), Gaps = 6/237 (2%)
 Frame = -1

Query: 1040 MRRVFGVKKEKEPPPSINDATDRISKRGESVDEKIKRLDGELSRYKEQIKKTRPGPAQEA 861
            MRRVFGVKK+KEPPPSI DA+DRI+K+G+SVD+KIK+LD EL+RY+EQIKKTRPGPAQEA
Sbjct: 1    MRRVFGVKKDKEPPPSIQDASDRINKKGDSVDDKIKKLDAELTRYREQIKKTRPGPAQEA 60

Query: 860  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMTALKSANKELKGMM 681
            VK+RAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFA+EGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61   VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 680  KTVKIQDIDSMQDEMMDLMDVSNEIQESLGRSYSVPXXXXXXXXXXXXXXXXXDMGMETE 501
            KTVKIQDID++QDEMMDLMDVSNEIQE+LGRSY++P                 DMG+E E
Sbjct: 121  KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNIPDDIDEEELMGELDALEADMGLEIE 180

Query: 500  SEGVPSYLQPDKESDYEAELNLPAAPSGHAVGP------QAEDELGLPAVPRASLRG 348
             +GVPSYLQPDKE D ++ELNLP+AP+G A GP      QAEDELGLPAVPRAS+RG
Sbjct: 181  GDGVPSYLQPDKEPDLDSELNLPSAPTGQAAGPAGRNNAQAEDELGLPAVPRASIRG 237


>ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|222865522|gb|EEF02653.1|
            predicted protein [Populus trichocarpa]
          Length = 236

 Score =  359 bits (921), Expect = 8e-97
 Identities = 183/236 (77%), Positives = 205/236 (86%), Gaps = 5/236 (2%)
 Frame = -1

Query: 1040 MRRVFGVKKEKEPPPSINDATDRISKRGESVDEKIKRLDGELSRYKEQIKKTRPGPAQEA 861
            MRRVFG KK+KEPPPSI DA+++I+KRG++VDEKIK+LD EL+RYKEQIKKTRPGPAQEA
Sbjct: 1    MRRVFGAKKDKEPPPSIQDASEKINKRGDTVDEKIKKLDAELARYKEQIKKTRPGPAQEA 60

Query: 860  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMTALKSANKELKGMM 681
            VK+RAMR+LKQKRMYEGQRDMLYNQT+NLDQVAFA+EGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61   VKARAMRILKQKRMYEGQRDMLYNQTYNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 680  KTVKIQDIDSMQDEMMDLMDVSNEIQESLGRSYSVPXXXXXXXXXXXXXXXXXDMGMETE 501
            KTVKIQDID++QDEMMDLMDVSNEIQE+LGRSY+VP                 DMGMETE
Sbjct: 121  KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEELMGELDALEADMGMETE 180

Query: 500  SEGVPSYLQPDKESDYEAELNLPAAPSGHAV-----GPQAEDELGLPAVPRASLRG 348
            S+GVPSYLQPDKESD +AELNLP+AP+G          QAEDELGLPAVPRASLRG
Sbjct: 181  SDGVPSYLQPDKESDLDAELNLPSAPTGQGAPASRYNAQAEDELGLPAVPRASLRG 236


>ref|XP_002267799.2| PREDICTED: charged multivesicular body protein 5-like [Vitis
            vinifera] gi|296084445|emb|CBI25004.3| unnamed protein
            product [Vitis vinifera]
          Length = 237

 Score =  357 bits (916), Expect = 3e-96
 Identities = 182/236 (77%), Positives = 203/236 (86%), Gaps = 6/236 (2%)
 Frame = -1

Query: 1040 MRRVFGVKKEKEPPPSINDATDRISKRGESVDEKIKRLDGELSRYKEQIKKTRPGPAQEA 861
            M+RVFGVKK+KEPPPS+ DATDRI+KRGE+VDEKIK+LD ELSRY+EQIKKTRPGPAQEA
Sbjct: 1    MKRVFGVKKDKEPPPSVQDATDRINKRGETVDEKIKKLDAELSRYREQIKKTRPGPAQEA 60

Query: 860  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMTALKSANKELKGMM 681
            VK+RAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61   VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMSALKSANKELKGMM 120

Query: 680  KTVKIQDIDSMQDEMMDLMDVSNEIQESLGRSYSVPXXXXXXXXXXXXXXXXXDMGMETE 501
            KTVKI+D+D++QDEMMDLMD+SNEIQESLGRSY+VP                 DMG E +
Sbjct: 121  KTVKIEDVDNLQDEMMDLMDISNEIQESLGRSYNVPDDIDEEELLGELDALEVDMGTEMD 180

Query: 500  SEGVPSYLQPDKESDYEAELNLPAAPSGHAVGP------QAEDELGLPAVPRASLR 351
            ++GVPSYLQPDK+ D EAELNLP+AP GHA  P      QAEDELGLPAVP AS+R
Sbjct: 181  ADGVPSYLQPDKDHDVEAELNLPSAPIGHATIPVGRSNVQAEDELGLPAVPHASIR 236


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