BLASTX nr result

ID: Coptis21_contig00002425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002425
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-li...    78   6e-13
ref|XP_003609656.1| WD repeat-containing protein [Medicago trunc...    77   2e-12
ref|XP_002307312.1| hypothetical protein POPTRDRAFT_760587 [Popu...    74   9e-12
ref|XP_002310317.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-li...    73   3e-11

>ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-like [Vitis vinifera]
           gi|297735857|emb|CBI18611.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 34/38 (89%), Positives = 38/38 (100%)
 Frame = +2

Query: 2   EGHTDTVVSVACHPSENMIASGALGNDKTVKIWTQERD 115
           EGHTDTV+SV+CHPS+NMIASGALG+DKTVKIWTQERD
Sbjct: 276 EGHTDTVISVSCHPSQNMIASGALGSDKTVKIWTQERD 313


>ref|XP_003609656.1| WD repeat-containing protein [Medicago truncatula]
           gi|355510711|gb|AES91853.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 326

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/38 (86%), Positives = 38/38 (100%)
 Frame = +2

Query: 2   EGHTDTVVSVACHPSENMIASGALGNDKTVKIWTQERD 115
           EGHTD+VVSV+CHP+ENMIASGALGNDKTVKIWTQ++D
Sbjct: 289 EGHTDSVVSVSCHPTENMIASGALGNDKTVKIWTQQKD 326


>ref|XP_002307312.1| hypothetical protein POPTRDRAFT_760587 [Populus trichocarpa]
           gi|222856761|gb|EEE94308.1| hypothetical protein
           POPTRDRAFT_760587 [Populus trichocarpa]
          Length = 317

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +2

Query: 2   EGHTDTVVSVACHPSENMIASGALGNDKTVKIWTQE 109
           EGHTDTV+SVACHP++N+IASGALGNDKTVKIWTQE
Sbjct: 281 EGHTDTVISVACHPTQNIIASGALGNDKTVKIWTQE 316


>ref|XP_002310317.1| predicted protein [Populus trichocarpa] gi|222853220|gb|EEE90767.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 31/37 (83%), Positives = 37/37 (100%)
 Frame = +2

Query: 2   EGHTDTVVSVACHPSENMIASGALGNDKTVKIWTQER 112
           EGHTDTV+SVACHP++NMIASGA+G+DKTVKIWTQE+
Sbjct: 281 EGHTDTVISVACHPTQNMIASGAIGSDKTVKIWTQEK 317


>ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
           gi|449531922|ref|XP_004172934.1| PREDICTED: WD
           repeat-containing protein 5-like [Cucumis sativus]
          Length = 318

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +2

Query: 2   EGHTDTVVSVACHPSENMIASGALGNDKTVKIWTQE 109
           EGH+DTV+SV+CHPSENMIASGA+GNDKTVKIWTQ+
Sbjct: 279 EGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK 314


Top