BLASTX nr result

ID: Coptis21_contig00002418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002418
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ84111.1| Clt1 [Citrus trifoliata]                                99   1e-18
gb|AFK38849.1| unknown [Lotus japonicus] gi|388522485|gb|AFK4930...    99   2e-18
gb|ACV50425.1| cold induced plasma membrane protein [Jatropha cu...    97   6e-18
gb|AAF26091.1|AC012393_17 low temperature and salt responsive pr...    95   2e-17
gb|ADK27676.1| plasma membrane protein 3-1 [Salvia miltiorrhiza]       95   2e-17

>gb|AAQ84111.1| Clt1 [Citrus trifoliata]
          Length = 54

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 46/54 (85%), Positives = 50/54 (92%)
 Frame = +1

Query: 364 MSGATVVEIILSIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAVYTITK 525
           M  AT V+IIL++ILPPLGVFL+FGCKAEFWICLLLTILGYIPGIIYAVY ITK
Sbjct: 1   MGTATCVDIILAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYVITK 54


>gb|AFK38849.1| unknown [Lotus japonicus] gi|388522485|gb|AFK49304.1| unknown
           [Lotus japonicus]
          Length = 54

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 46/54 (85%), Positives = 49/54 (90%)
 Frame = +1

Query: 364 MSGATVVEIILSIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAVYTITK 525
           M  AT V+IIL+IILPPLGVFLRFGCK EFWICLLLTILGYIPGIIYA+Y ITK
Sbjct: 1   MGTATCVDIILAIILPPLGVFLRFGCKVEFWICLLLTILGYIPGIIYAIYAITK 54


>gb|ACV50425.1| cold induced plasma membrane protein [Jatropha curcas]
          Length = 57

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 43/51 (84%), Positives = 49/51 (96%)
 Frame = +1

Query: 373 ATVVEIILSIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAVYTITK 525
           AT ++I+L++ILPPLGVFL+FGCKAEFWICLLLTILGYIPGIIYAVY ITK
Sbjct: 7   ATCIDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITK 57


>gb|AAF26091.1|AC012393_17 low temperature and salt responsive protein LTI6B [Arabidopsis
           thaliana]
          Length = 67

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = +1

Query: 364 MSGATVVEIILSIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAVYTITK*N 531
           MS AT VEIIL+IILPPLGVFL+FGCK EFWICL+LT+ GY+PGI+YA+Y ITK N
Sbjct: 1   MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITKKN 56


>gb|ADK27676.1| plasma membrane protein 3-1 [Salvia miltiorrhiza]
          Length = 55

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 42/54 (77%), Positives = 50/54 (92%)
 Frame = +1

Query: 364 MSGATVVEIILSIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAVYTITK 525
           M+ AT ++II++IILPPLGVFL+FGCK EFW+CLLLT+LGYIPGIIYAVY ITK
Sbjct: 1   MAAATCIDIIVAIILPPLGVFLKFGCKHEFWLCLLLTLLGYIPGIIYAVYAITK 54


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