BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002405
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    55   6e-06

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/67 (38%), Positives = 37/67 (55%)
 Frame = -1

Query: 220 FWKSINDCNSLKCNSRGIHLTWSNNLDGLRRIYSKLERGIINYEWRLKYRGWKYKA*CRA 41
           F   +N+CN L   + G   TW  N +G+R +  KL+RG+ N +WRL +     +  CR 
Sbjct: 160 FSNFMNNCNLLDLTTTGGRFTWHKNNNGIRILSKKLDRGMANVDWRLSFPEAFVEVLCRL 219

Query: 40  GSDHAPL 20
            SDH PL
Sbjct: 220 HSDHNPL 226