BLASTX nr result

ID: Coptis21_contig00002403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002403
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48
ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|2...   192   1e-46
ref|XP_003594057.1| hypothetical protein MTR_2g020850 [Medicago ...   188   1e-45
ref|XP_002516830.1| conserved hypothetical protein [Ricinus comm...   188   1e-45
gb|AFK48704.1| unknown [Medicago truncatula]                          187   3e-45

>ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|222852196|gb|EEE89743.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  197 bits (500), Expect = 3e-48
 Identities = 91/170 (53%), Positives = 125/170 (73%)
 Frame = +2

Query: 77  EQKTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTRNKYFSVIFLGLCGVFSFLSWF 256
           + KTF+G+ N++KLLP+G +F+ Q LNP++TNNG+C T NKY S I +GLCG     S F
Sbjct: 11  QDKTFSGVGNLVKLLPTGTVFMFQFLNPVLTNNGQCHTVNKYLSGILMGLCGFSCCFSCF 70

Query: 257 TDSYTDSNGETRYGVVTKNGMILLPDSDTKSLDPVDLSAYKLRLGDFVHASLSLLLFATV 436
           TDSY  S+G T YG+ T  G  L P SD+ +   VDLS+YKLR+GDF HA  SL++FA +
Sbjct: 71  TDSYRGSDGWTHYGIATMKG--LRPSSDSSAGSSVDLSSYKLRVGDFAHAFFSLIVFAVL 128

Query: 437 AFLDPNTVQCFRPSLKPEQEKLLLVLPPLIGAIASSIFVIFPNTRHGIGF 586
           + LD NTV+CF PS +  ++ LL+VLPP IGA++ ++F++FPN RHGIG+
Sbjct: 129 SLLDRNTVKCFNPSFESTEKVLLMVLPPAIGAVSGTVFMLFPNKRHGIGY 178


>ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|222864582|gb|EEF01713.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  192 bits (487), Expect = 1e-46
 Identities = 91/170 (53%), Positives = 124/170 (72%)
 Frame = +2

Query: 77  EQKTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTRNKYFSVIFLGLCGVFSFLSWF 256
           + KTF+G+ N+IKLLP+G +F+ Q LNP++TNNG+C T NKY S I +GLCG     S F
Sbjct: 11  QDKTFSGVGNLIKLLPTGTVFMFQFLNPVLTNNGQCHTVNKYLSGILMGLCGFSCCFSCF 70

Query: 257 TDSYTDSNGETRYGVVTKNGMILLPDSDTKSLDPVDLSAYKLRLGDFVHASLSLLLFATV 436
           TDSY  S+G T YG+ T  G  L P SD+     VDLS+YKLR+GDF HA  SL++F+ +
Sbjct: 71  TDSYRGSDGWTHYGIATMKG--LWPSSDSAG-SSVDLSSYKLRVGDFAHAFFSLIVFSVL 127

Query: 437 AFLDPNTVQCFRPSLKPEQEKLLLVLPPLIGAIASSIFVIFPNTRHGIGF 586
           + LD NTV+CF PS +  ++ LL+VLPP IGA++ ++F++FPN RHGIG+
Sbjct: 128 SLLDSNTVKCFYPSFESTEKVLLMVLPPAIGAVSGTVFMLFPNKRHGIGY 177


>ref|XP_003594057.1| hypothetical protein MTR_2g020850 [Medicago truncatula]
           gi|355483105|gb|AES64308.1| hypothetical protein
           MTR_2g020850 [Medicago truncatula]
          Length = 198

 Score =  188 bits (477), Expect = 1e-45
 Identities = 94/188 (50%), Positives = 129/188 (68%), Gaps = 3/188 (1%)
 Frame = +2

Query: 32  NKSSSIRRTFTIKNAEQ---KTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTRNKY 202
           ++ +S  +T T K A     KTF+G+ N++KLLP+G +FL Q L+P+VTNNG C T NKY
Sbjct: 2   SEKASSSKTSTNKGASTMTGKTFSGVGNLVKLLPTGTVFLFQYLSPVVTNNGHCSTINKY 61

Query: 203 FSVIFLGLCGVFSFLSWFTDSYTDSNGETRYGVVTKNGMILLPDSDTKSLDPVDLSAYKL 382
            S I L +CG     + FTDSYT S+G+  YG+VT NG+   P SD+     VDLSAYKL
Sbjct: 62  LSGILLVICGFNCAFTSFTDSYTGSDGQRHYGIVTMNGLWPSPGSDS-----VDLSAYKL 116

Query: 383 RLGDFVHASLSLLLFATVAFLDPNTVQCFRPSLKPEQEKLLLVLPPLIGAIASSIFVIFP 562
           R GDFVHA LS+++FA +  LD N V CF P  +  ++ L+ VLPP+IG ++ ++F+IFP
Sbjct: 117 RFGDFVHAFLSVIVFAVLGLLDTNVVHCFYPKFESSEKILMQVLPPVIGVVSGAVFMIFP 176

Query: 563 NTRHGIGF 586
           + RHGIG+
Sbjct: 177 SYRHGIGY 184


>ref|XP_002516830.1| conserved hypothetical protein [Ricinus communis]
           gi|223543918|gb|EEF45444.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 193

 Score =  188 bits (477), Expect = 1e-45
 Identities = 91/173 (52%), Positives = 122/173 (70%)
 Frame = +2

Query: 68  KNAEQKTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKTRNKYFSVIFLGLCGVFSFL 247
           K+ + KTFTG  N+IKLLP+G +F+ Q LNP++TNNG C T NKY S I +GLCG     
Sbjct: 12  KSMKDKTFTGFGNLIKLLPTGTVFIFQFLNPVLTNNGHCHTINKYLSGILIGLCGFSCAF 71

Query: 248 SWFTDSYTDSNGETRYGVVTKNGMILLPDSDTKSLDPVDLSAYKLRLGDFVHASLSLLLF 427
           S FTDSY  S+G   YGV T  G  + P ++  S   VDLS YKL+ GDFVH+  SL++F
Sbjct: 72  SSFTDSYVGSDGLIHYGVATVKG--IWPSANAGS--SVDLSPYKLQFGDFVHSFFSLIVF 127

Query: 428 ATVAFLDPNTVQCFRPSLKPEQEKLLLVLPPLIGAIASSIFVIFPNTRHGIGF 586
           A ++ LD NTV CF PS +  ++ LL+VLPP+IGAI+ ++F++FPN RHG+G+
Sbjct: 128 AVLSLLDSNTVDCFYPSFESTEKTLLMVLPPVIGAISGTVFMVFPNKRHGVGY 180


>gb|AFK48704.1| unknown [Medicago truncatula]
          Length = 198

 Score =  187 bits (475), Expect = 3e-45
 Identities = 94/192 (48%), Positives = 132/192 (68%)
 Frame = +2

Query: 11  MAQITPDNKSSSIRRTFTIKNAEQKTFTGLSNVIKLLPSGNIFLLQLLNPLVTNNGKCKT 190
           M++    +K+S+ + T T+     KTF+G+ N++KLLP+G +FL Q L+P+VTNNG C T
Sbjct: 1   MSEKASSSKTSTNKGTSTMTG---KTFSGVGNLVKLLPTGTVFLFQYLSPVVTNNGHCST 57

Query: 191 RNKYFSVIFLGLCGVFSFLSWFTDSYTDSNGETRYGVVTKNGMILLPDSDTKSLDPVDLS 370
            NKY S I L +CG     + FTDSYT S+G+  YG+VT NG+   P SD+     VDLS
Sbjct: 58  INKYLSGIPLVICGFNCAFTSFTDSYTGSDGQRHYGIVTMNGLWPSPGSDS-----VDLS 112

Query: 371 AYKLRLGDFVHASLSLLLFATVAFLDPNTVQCFRPSLKPEQEKLLLVLPPLIGAIASSIF 550
           AYKLR GDFVHA LS+++FA +  LD N V CF P  +  ++ L+ VLPP+IG ++ ++F
Sbjct: 113 AYKLRFGDFVHAFLSVIVFAVLGLLDTNVVHCFYPKFESSEKILMQVLPPVIGVVSGAVF 172

Query: 551 VIFPNTRHGIGF 586
           +IFP+ RHGIG+
Sbjct: 173 MIFPSYRHGIGY 184


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