BLASTX nr result

ID: Coptis21_contig00002402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002402
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|2...   198   9e-49
ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|2...   196   6e-48
ref|XP_002516830.1| conserved hypothetical protein [Ricinus comm...   189   4e-46
ref|XP_003594057.1| hypothetical protein MTR_2g020850 [Medicago ...   186   5e-45
gb|AFK48704.1| unknown [Medicago truncatula]                          184   2e-44

>ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|222852196|gb|EEE89743.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  198 bits (504), Expect = 9e-49
 Identities = 91/170 (53%), Positives = 126/170 (74%)
 Frame = +3

Query: 63  EQKTFTGLSNLIKVLPSGNIFLLQLLNPLVTNNGKCKTSNKYFTAIFLGLCGAFSFFSWF 242
           + KTF+G+ NL+K+LP+G +F+ Q LNP++TNNG+C T NKY + I +GLCG    FS F
Sbjct: 11  QDKTFSGVGNLVKLLPTGTVFMFQFLNPVLTNNGQCHTVNKYLSGILMGLCGFSCCFSCF 70

Query: 243 TDSYTDSNGETRYGVVTKNGIILLSDSDTKSPDPVDLSAYKLRLGDFVHASLSLLVFATV 422
           TDSY  S+G T YG+ T  G  L   SD+ +   VDLS+YKLR+GDF HA  SL+VFA +
Sbjct: 71  TDSYRGSDGWTHYGIATMKG--LRPSSDSSAGSSVDLSSYKLRVGDFAHAFFSLIVFAVL 128

Query: 423 AYLDPNSVKCFSPSLKPVQEKLLLVLPPLIGAIASSIFVIFPNTRHGIGF 572
           + LD N+VKCF+PS +  ++ LL+VLPP IGA++ ++F++FPN RHGIG+
Sbjct: 129 SLLDRNTVKCFNPSFESTEKVLLMVLPPAIGAVSGTVFMLFPNKRHGIGY 178


>ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|222864582|gb|EEF01713.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  196 bits (497), Expect = 6e-48
 Identities = 92/170 (54%), Positives = 125/170 (73%)
 Frame = +3

Query: 63  EQKTFTGLSNLIKVLPSGNIFLLQLLNPLVTNNGKCKTSNKYFTAIFLGLCGAFSFFSWF 242
           + KTF+G+ NLIK+LP+G +F+ Q LNP++TNNG+C T NKY + I +GLCG    FS F
Sbjct: 11  QDKTFSGVGNLIKLLPTGTVFMFQFLNPVLTNNGQCHTVNKYLSGILMGLCGFSCCFSCF 70

Query: 243 TDSYTDSNGETRYGVVTKNGIILLSDSDTKSPDPVDLSAYKLRLGDFVHASLSLLVFATV 422
           TDSY  S+G T YG+ T  G+   SDS   S   VDLS+YKLR+GDF HA  SL+VF+ +
Sbjct: 71  TDSYRGSDGWTHYGIATMKGLWPSSDSAGSS---VDLSSYKLRVGDFAHAFFSLIVFSVL 127

Query: 423 AYLDPNSVKCFSPSLKPVQEKLLLVLPPLIGAIASSIFVIFPNTRHGIGF 572
           + LD N+VKCF PS +  ++ LL+VLPP IGA++ ++F++FPN RHGIG+
Sbjct: 128 SLLDSNTVKCFYPSFESTEKVLLMVLPPAIGAVSGTVFMLFPNKRHGIGY 177


>ref|XP_002516830.1| conserved hypothetical protein [Ricinus communis]
           gi|223543918|gb|EEF45444.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 193

 Score =  189 bits (481), Expect = 4e-46
 Identities = 90/173 (52%), Positives = 123/173 (71%)
 Frame = +3

Query: 54  KNAEQKTFTGLSNLIKVLPSGNIFLLQLLNPLVTNNGKCKTSNKYFTAIFLGLCGAFSFF 233
           K+ + KTFTG  NLIK+LP+G +F+ Q LNP++TNNG C T NKY + I +GLCG    F
Sbjct: 12  KSMKDKTFTGFGNLIKLLPTGTVFIFQFLNPVLTNNGHCHTINKYLSGILIGLCGFSCAF 71

Query: 234 SWFTDSYTDSNGETRYGVVTKNGIILLSDSDTKSPDPVDLSAYKLRLGDFVHASLSLLVF 413
           S FTDSY  S+G   YGV T  GI   +++ +     VDLS YKL+ GDFVH+  SL+VF
Sbjct: 72  SSFTDSYVGSDGLIHYGVATVKGIWPSANAGSS----VDLSPYKLQFGDFVHSFFSLIVF 127

Query: 414 ATVAYLDPNSVKCFSPSLKPVQEKLLLVLPPLIGAIASSIFVIFPNTRHGIGF 572
           A ++ LD N+V CF PS +  ++ LL+VLPP+IGAI+ ++F++FPN RHG+G+
Sbjct: 128 AVLSLLDSNTVDCFYPSFESTEKTLLMVLPPVIGAISGTVFMVFPNKRHGVGY 180


>ref|XP_003594057.1| hypothetical protein MTR_2g020850 [Medicago truncatula]
           gi|355483105|gb|AES64308.1| hypothetical protein
           MTR_2g020850 [Medicago truncatula]
          Length = 198

 Score =  186 bits (472), Expect = 5e-45
 Identities = 94/188 (50%), Positives = 129/188 (68%), Gaps = 3/188 (1%)
 Frame = +3

Query: 18  NKSSSIRRTFTIKNAEQ---KTFTGLSNLIKVLPSGNIFLLQLLNPLVTNNGKCKTSNKY 188
           ++ +S  +T T K A     KTF+G+ NL+K+LP+G +FL Q L+P+VTNNG C T NKY
Sbjct: 2   SEKASSSKTSTNKGASTMTGKTFSGVGNLVKLLPTGTVFLFQYLSPVVTNNGHCSTINKY 61

Query: 189 FTAIFLGLCGAFSFFSWFTDSYTDSNGETRYGVVTKNGIILLSDSDTKSPDPVDLSAYKL 368
            + I L +CG    F+ FTDSYT S+G+  YG+VT NG+     SD+     VDLSAYKL
Sbjct: 62  LSGILLVICGFNCAFTSFTDSYTGSDGQRHYGIVTMNGLWPSPGSDS-----VDLSAYKL 116

Query: 369 RLGDFVHASLSLLVFATVAYLDPNSVKCFSPSLKPVQEKLLLVLPPLIGAIASSIFVIFP 548
           R GDFVHA LS++VFA +  LD N V CF P  +  ++ L+ VLPP+IG ++ ++F+IFP
Sbjct: 117 RFGDFVHAFLSVIVFAVLGLLDTNVVHCFYPKFESSEKILMQVLPPVIGVVSGAVFMIFP 176

Query: 549 NTRHGIGF 572
           + RHGIG+
Sbjct: 177 SYRHGIGY 184


>gb|AFK48704.1| unknown [Medicago truncatula]
          Length = 198

 Score =  184 bits (466), Expect = 2e-44
 Identities = 93/185 (50%), Positives = 129/185 (69%)
 Frame = +3

Query: 18  NKSSSIRRTFTIKNAEQKTFTGLSNLIKVLPSGNIFLLQLLNPLVTNNGKCKTSNKYFTA 197
           +K+S+ + T T+     KTF+G+ NL+K+LP+G +FL Q L+P+VTNNG C T NKY + 
Sbjct: 8   SKTSTNKGTSTMTG---KTFSGVGNLVKLLPTGTVFLFQYLSPVVTNNGHCSTINKYLSG 64

Query: 198 IFLGLCGAFSFFSWFTDSYTDSNGETRYGVVTKNGIILLSDSDTKSPDPVDLSAYKLRLG 377
           I L +CG    F+ FTDSYT S+G+  YG+VT NG+     SD+     VDLSAYKLR G
Sbjct: 65  IPLVICGFNCAFTSFTDSYTGSDGQRHYGIVTMNGLWPSPGSDS-----VDLSAYKLRFG 119

Query: 378 DFVHASLSLLVFATVAYLDPNSVKCFSPSLKPVQEKLLLVLPPLIGAIASSIFVIFPNTR 557
           DFVHA LS++VFA +  LD N V CF P  +  ++ L+ VLPP+IG ++ ++F+IFP+ R
Sbjct: 120 DFVHAFLSVIVFAVLGLLDTNVVHCFYPKFESSEKILMQVLPPVIGVVSGAVFMIFPSYR 179

Query: 558 HGIGF 572
           HGIG+
Sbjct: 180 HGIGY 184


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