BLASTX nr result

ID: Coptis21_contig00002399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002399
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279766.1| PREDICTED: UPF0497 membrane protein 16 [Viti...   232   6e-59
emb|CAN63416.1| hypothetical protein VITISV_007688 [Vitis vinifera]   230   2e-58
ref|XP_002315238.1| predicted protein [Populus trichocarpa] gi|3...   213   5e-53
ref|XP_002529903.1| conserved hypothetical protein [Ricinus comm...   199   6e-49
gb|AFK35918.1| unknown [Medicago truncatula]                          196   7e-48

>ref|XP_002279766.1| PREDICTED: UPF0497 membrane protein 16 [Vitis vinifera]
           gi|226713187|sp|A7P0P3.1|CSPL3_VITVI RecName:
           Full=CASP-like protein VIT_19s0090g00570
           gi|297737447|emb|CBI26648.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  232 bits (592), Expect = 6e-59
 Identities = 115/186 (61%), Positives = 140/186 (75%)
 Frame = +2

Query: 104 MRSFTESQPTLANHHNNLHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIG 283
           M +  E+ P  + H   L ++D  LRL +IPL+ A+IWLTVTN++++S YGKLEFSN  G
Sbjct: 1   MSNLAETAPISSAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTG 60

Query: 284 LKYMICINAISAGYALVALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAY 463
           LKYM+CI+ ISAGYALVA+V+SW+RCLV KAW+FFVSDQ++ YLMVTSGAAV+EILYLAY
Sbjct: 61  LKYMVCISGISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAY 120

Query: 464 NGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPPVPRQPS 643
            GDR VSWSEACSS+GRFCSR             CF  L++ISAYR FS FEPPV    S
Sbjct: 121 KGDRGVSWSEACSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPV---SS 177

Query: 644 KGVHED 661
           K V E+
Sbjct: 178 KEVEEE 183


>emb|CAN63416.1| hypothetical protein VITISV_007688 [Vitis vinifera]
          Length = 186

 Score =  230 bits (587), Expect = 2e-58
 Identities = 114/186 (61%), Positives = 139/186 (74%)
 Frame = +2

Query: 104 MRSFTESQPTLANHHNNLHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIG 283
           M +  E+ P  + H   L ++D  LRL +IPL+ A+IWLTVTN++++S YGKLEFSN  G
Sbjct: 1   MSNLAETAPISSAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTG 60

Query: 284 LKYMICINAISAGYALVALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAY 463
           LKYM+CI+ ISAGYALVA+V+SW+RCLV KAW+FFVSDQ++ YLMVTSGAAV+EILYLAY
Sbjct: 61  LKYMVCISGISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAY 120

Query: 464 NGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPPVPRQPS 643
            GDR VSWSEACS +GRFCSR             CF  L++ISAYR FS FEPPV    S
Sbjct: 121 KGDRGVSWSEACSXYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPV---SS 177

Query: 644 KGVHED 661
           K V E+
Sbjct: 178 KEVEEE 183


>ref|XP_002315238.1| predicted protein [Populus trichocarpa]
           gi|341958558|sp|B9HTL5.1|CSPLC_POPTR RecName:
           Full=CASP-like protein POPTRDRAFT_833824
           gi|222864278|gb|EEF01409.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score =  213 bits (541), Expect = 5e-53
 Identities = 103/169 (60%), Positives = 130/169 (76%)
 Frame = +2

Query: 155 LHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIGLKYMICINAISAGYALV 334
           L +LD  LRLS+IPL+ A+IWLTVTNK+++S YG L++S+  GLKYM+ I+ I A YA +
Sbjct: 2   LKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAFI 61

Query: 335 ALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGR 514
           A VS+W+RC+VTK W+FFVSDQ+V YLMVTSG AV+EILYLAYNGDR+VSWSEAC+S+G+
Sbjct: 62  AAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYGK 121

Query: 515 FCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPPVPRQPSKGVHED 661
           FC R            +CF  L++ISAYR FS FEPP+   PSK V ED
Sbjct: 122 FCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPL--VPSKVVEED 168


>ref|XP_002529903.1| conserved hypothetical protein [Ricinus communis]
           gi|288559184|sp|B9SV84.1|CSPL7_RICCO RecName:
           Full=CASP-like protein RCOM_1302390
           gi|223530580|gb|EEF32457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  199 bits (506), Expect = 6e-49
 Identities = 92/158 (58%), Positives = 123/158 (77%)
 Frame = +2

Query: 155 LHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIGLKYMICINAISAGYALV 334
           L +LDS LR+S+IPL+AA+IWLTVTN +++S+YG L++SN +GLKYM+CI+AI A YA V
Sbjct: 5   LKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYAFV 64

Query: 335 ALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGR 514
           A VS W++CLV K W+FFVSDQ++ YLMVTS AA +EILY+AYNGD+ V+WSEAC+S+G+
Sbjct: 65  AAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSYGK 124

Query: 515 FCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPPV 628
           FC+               F  L++ISAYR FS ++PPV
Sbjct: 125 FCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPV 162


>gb|AFK35918.1| unknown [Medicago truncatula]
          Length = 187

 Score =  196 bits (497), Expect = 7e-48
 Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 3/178 (1%)
 Frame = +2

Query: 137 ANHHNNL---HILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIGLKYMICIN 307
           A+  NNL    +LDS LRL  +PL+ A+IW+TVTNK+++++YG L++S+  GLKYMI ++
Sbjct: 10  ASGENNLPMLKLLDSSLRLCSVPLSLATIWITVTNKQDNTSYGTLKYSDISGLKYMIFVS 69

Query: 308 AISAGYALVALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAYNGDRDVSW 487
           A+ AGYA+VA V SW+R L+TKAW+FF+SDQVV YLMVTS AA +EI YLAYNG R+ SW
Sbjct: 70  ALCAGYAIVAAVCSWVRYLMTKAWIFFISDQVVAYLMVTSIAATMEIYYLAYNGAREDSW 129

Query: 488 SEACSSFGRFCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPPVPRQPSKGVHED 661
           S+ACSS+G+FCS+             CFF L++ISA+R FS F+PP     S+ V+ED
Sbjct: 130 SQACSSYGKFCSKVKLALILHMITFGCFFVLAIISAFRAFSVFDPPSVN--SQEVYED 185


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