BLASTX nr result

ID: Coptis21_contig00002386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002386
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268948.1| PREDICTED: uncharacterized protein LOC100253...   135   2e-29
ref|XP_002309177.1| predicted protein [Populus trichocarpa] gi|2...   126   1e-26
ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|2...   115   2e-23
ref|XP_002520838.1| conserved hypothetical protein [Ricinus comm...    93   9e-17
ref|XP_003623569.1| hypothetical protein MTR_7g072540 [Medicago ...    93   1e-16

>ref|XP_002268948.1| PREDICTED: uncharacterized protein LOC100253378 [Vitis vinifera]
          Length = 208

 Score =  135 bits (339), Expect = 2e-29
 Identities = 89/218 (40%), Positives = 112/218 (51%), Gaps = 9/218 (4%)
 Frame = -1

Query: 912 MFSGNSDVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPK 733
           M     DVPQK LQIK+DDKF+SRLLSKESS+ANPS RVYYGG +GA+PF WESQPGTPK
Sbjct: 1   MLRSEQDVPQKRLQIKEDDKFFSRLLSKESSMANPSSRVYYGGVTGAVPFTWESQPGTPK 60

Query: 732 NKFCDXXXXXXXXXXSFH--XXXXXXXXXXXXXKLIHTIFPRLSVRKTH-------ATXX 580
             F +          S++                L+H+IFPR++    +       ++  
Sbjct: 61  YTFSESSLPPLTPPPSYYSNSMDKKPNKKHSRSNLLHSIFPRMNHNNNNPKKPNVLSSPS 120

Query: 579 XXXXXXXXXXXXXXXXXXXXXXSKTHRRLPSSLSASFDYRGDYEEPTLGSPTSTLCFSNV 400
                                 +   RR   S  +SFD   DYEE  + SPTSTLCF   
Sbjct: 121 LSSSCSSWSSPRSSSMSGSLTPNFLRRRRCCSSRSSFDSGADYEEEAV-SPTSTLCF--- 176

Query: 399 SRKSSGGFKGCYSMVIFKNAFSSMICGHGSNGHRQGTA 286
             +   G +G  S+V+ K AF SM+ GHGS    QGTA
Sbjct: 177 --RMGSGLRGRCSVVVMKKAFLSMV-GHGSG---QGTA 208


>ref|XP_002309177.1| predicted protein [Populus trichocarpa] gi|222855153|gb|EEE92700.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  126 bits (316), Expect = 1e-26
 Identities = 79/186 (42%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
 Frame = -1

Query: 894 DVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKNKFCDX 715
           D+PQK+LQIKQDDKF+SRLLS+ESS+ANPS RVYYGG S  +PF WESQPGTPK  FC+ 
Sbjct: 11  DLPQKALQIKQDDKFFSRLLSRESSMANPSFRVYYGGVSVGVPFVWESQPGTPKYTFCEN 70

Query: 714 XXXXXXXXXSFH-XXXXXXXXXXXXXKLIHTIFPRLSVRKTH--ATXXXXXXXXXXXXXX 544
                    S++               L+H +F R + +K +   +              
Sbjct: 71  TLPPLTPPPSYYRNSDKKTIKKHSRSSLLHLLFSRNNPKKNNVSTSATNLSSTPSSASWS 130

Query: 543 XXXXXXXXXXSKTHRRLP-SSLSASFDYR--GDYEEPTLGSPTSTLCFSNVSRK-SSGGF 376
                      K H R   SS  +SFD R   D EE  +GSPTSTLCF    R  S+GG 
Sbjct: 131 SLNSSSLLTPRKYHERSRYSSRGSSFDSRVFEDVEESHMGSPTSTLCFGISGRNASTGGL 190

Query: 375 KGCYSM 358
           +GCY +
Sbjct: 191 RGCYGV 196


>ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|222868288|gb|EEF05419.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  115 bits (287), Expect = 2e-23
 Identities = 77/192 (40%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
 Frame = -1

Query: 894 DVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKNKFCDX 715
           D PQK+L++KQDDKF+SRL+SKE+S+ANPS RVYYGG S A+PF WESQPGTPK  FC+ 
Sbjct: 10  DHPQKALEMKQDDKFFSRLMSKENSMANPSFRVYYGGVSVAVPFVWESQPGTPKYTFCEK 69

Query: 714 XXXXXXXXXSFH-XXXXXXXXXXXXXKLIHTIFPRLSVRKTHAT------XXXXXXXXXX 556
                    S++               L+  +FPR ++RKT+ +                
Sbjct: 70  TLPPLTPPPSYYTNSNKKPTKNHSRSNLLRFLFPRNNLRKTNVSSSATNLSTSPSSASWS 129

Query: 555 XXXXXXXXXXXXXXSKTHRRLP-SSLSASFDYR--GDYEEP-TLG-SPTSTLCFSNVSRK 391
                          K H R   SS  +SFD R   D+EE   +G SP+S LCF    R 
Sbjct: 130 SLTSSSNLRSLSTPRKYHERSGFSSRGSSFDSRVFDDFEESHNMGSSPSSKLCFGISGRS 189

Query: 390 -SSGGFKGCYSM 358
            S+GG +GCY +
Sbjct: 190 TSTGGLRGCYGV 201


>ref|XP_002520838.1| conserved hypothetical protein [Ricinus communis]
           gi|223539969|gb|EEF41547.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 233

 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 73/220 (33%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
 Frame = -1

Query: 900 NSDVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKN-KF 724
           + ++ Q+SL+IK+D+KF++R++SKE+S+AN S RVYYGGASGA+PF WES+PGTPK+  F
Sbjct: 8   HDELNQESLEIKKDEKFFTRIMSKETSMANSSCRVYYGGASGAVPFTWESRPGTPKHTSF 67

Query: 723 CD---XXXXXXXXXXSFHXXXXXXXXXXXXXKLIHTIFPRLSVRKTHATXXXXXXXXXXX 553
            D              +               L +TI PRL  +KT              
Sbjct: 68  ADNTSNIPPLTPPPSYYSTSKSKSMRKRTKQNLFNTIIPRLMTKKTSHVSPSSSMSSTTT 127

Query: 552 XXXXXXXXXXXXXSKTH-----------RRLP----SSLSASFDYRGDYEEPTLG-SPTS 421
                        S  H           R+ P    S     +    D EE  L    +S
Sbjct: 128 SSSSSSWTSRSSSSSYHSSPATFNDSKSRKHPCFVCSKSPIHYGVDDDDEEHGLELFSSS 187

Query: 420 TLCFSNVSRKSSGGFKGCYSMVIFKNAFSSMICGHGSNGH 301
            LC+   S K    F G Y M   K+A  S++ GHG+NGH
Sbjct: 188 RLCYGGKS-KGLNVFGGRYIMENMKSALLSIV-GHGNNGH 225


>ref|XP_003623569.1| hypothetical protein MTR_7g072540 [Medicago truncatula]
           gi|355498584|gb|AES79787.1| hypothetical protein
           MTR_7g072540 [Medicago truncatula]
          Length = 226

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 67/207 (32%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
 Frame = -1

Query: 912 MFSGNSDVPQKS-LQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTP 736
           MFS  S+ PQK+ LQIKQDDKF+ RLL+KESS++NPS RV     +  +PF WESQPGTP
Sbjct: 1   MFSSKSEQPQKTILQIKQDDKFFCRLLTKESSISNPSFRV-----AVTVPFVWESQPGTP 55

Query: 735 KNKFCDXXXXXXXXXXSFHXXXXXXXXXXXXXKLIHTIFPRLSVRK-------THATXXX 577
           K  F +          S++              +   +FP+L+++K       +  +   
Sbjct: 56  KYTFSEKNLPPLTPPPSYYSCKKTPIKKNSRSNIFLALFPKLNLKKNIMSSSSSSPSNSP 115

Query: 576 XXXXXXXXXXXXXXXXXXXXXSKTHRRLPSSLSASFDYRGDYEEPTLGSPTSTLCFS--- 406
                                  T RR   S  +S D+  + +E    SPTSTLCF    
Sbjct: 116 SSPYYSSASCSSSDSSSSSSKVVTRRRRFLSYGSSIDFTREEDEDAT-SPTSTLCFGLSR 174

Query: 405 NVSRKSSGGFKGCYSMVIFKNAFSSMI 325
           + S K+  GF G      F  A+ +++
Sbjct: 175 STSTKAHSGFLGFSKSFSFSMAYCALV 201


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