BLASTX nr result

ID: Coptis21_contig00002377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002377
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADQ43193.1| unknown [Eutrema parvulum]                             134   6e-30
gb|ACQ90601.1| putative Myb DNA binding protein [Eutrema halophi...   134   1e-29
ref|XP_002465932.1| hypothetical protein SORBIDRAFT_01g048460 [S...   130   1e-28
ref|NP_172911.1| putative myb DNA binding protein [Arabidopsis t...   130   1e-28
gb|ABR16599.1| unknown [Picea sitchensis]                             130   1e-28

>gb|ADQ43193.1| unknown [Eutrema parvulum]
          Length = 395

 Score =  134 bits (338), Expect = 6e-30
 Identities = 59/91 (64%), Positives = 76/91 (83%)
 Frame = +1

Query: 4   TIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCFN 183
           T+ILTTLN+AWA PGS++DL  ESF IGEGTS LLNHLVI+A+D  A++RC+ +H HCF+
Sbjct: 110 TVILTTLNEAWAAPGSVIDLFFESFGIGEGTSTLLNHLVIIALDDKAYSRCRELHKHCFS 169

Query: 184 LTTPGVDFAEDERYMSENYLKLMWRRIDFLR 276
           L T GVDF+ +  +M+ +YLK+MWRRIDFLR
Sbjct: 170 LETEGVDFSREAYFMTRSYLKMMWRRIDFLR 200


>gb|ACQ90601.1| putative Myb DNA binding protein [Eutrema halophilum]
          Length = 397

 Score =  134 bits (336), Expect = 1e-29
 Identities = 59/91 (64%), Positives = 76/91 (83%)
 Frame = +1

Query: 4   TIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCFN 183
           T+ILTTLN+AWA PGS++DL  ESF IGEGTS LLNHLVI+A+D  A++RC+ +H HCF+
Sbjct: 111 TVILTTLNEAWAAPGSVIDLFFESFGIGEGTSMLLNHLVIIALDAKAYSRCRELHKHCFS 170

Query: 184 LTTPGVDFAEDERYMSENYLKLMWRRIDFLR 276
           L T GVDF+ +  +M+ +YLK+MWRRIDFLR
Sbjct: 171 LETEGVDFSGEAYFMTRSYLKMMWRRIDFLR 201


>ref|XP_002465932.1| hypothetical protein SORBIDRAFT_01g048460 [Sorghum bicolor]
           gi|241919786|gb|EER92930.1| hypothetical protein
           SORBIDRAFT_01g048460 [Sorghum bicolor]
          Length = 380

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/91 (63%), Positives = 73/91 (80%)
 Frame = +1

Query: 4   TIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCFN 183
           T+ILTTLN AW+EPGS+LD+ LESFR GE T  LL+HLVIV++D TA  RC+ +H HCF 
Sbjct: 111 TVILTTLNSAWSEPGSVLDVFLESFRSGESTRELLDHLVIVSLDTTAHARCRQVHRHCFA 170

Query: 184 LTTPGVDFAEDERYMSENYLKLMWRRIDFLR 276
           L T GVDF+  + +M++ YLK+MWRRIDFLR
Sbjct: 171 LVTDGVDFSGQKNFMTDGYLKMMWRRIDFLR 201


>ref|NP_172911.1| putative myb DNA binding protein [Arabidopsis thaliana]
           gi|7527728|gb|AAF63177.1|AC010657_13 T5E21.9
           [Arabidopsis thaliana] gi|332191067|gb|AEE29188.1|
           putative myb DNA binding protein [Arabidopsis thaliana]
          Length = 386

 Score =  130 bits (326), Expect = 1e-28
 Identities = 57/92 (61%), Positives = 75/92 (81%)
 Frame = +1

Query: 1   RTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCF 180
           RT++LTTLN AWA PGS++DL  ESFRIGE TS++L+HLVIVA+D  A++RC  +H HCF
Sbjct: 97  RTVVLTTLNAAWAAPGSVIDLFFESFRIGEETSQILDHLVIVALDAKAYSRCLELHKHCF 156

Query: 181 NLTTPGVDFAEDERYMSENYLKLMWRRIDFLR 276
           +L T GVDF+ +  +M+ +YLK+MWRRID LR
Sbjct: 157 SLVTEGVDFSREAYFMTRSYLKMMWRRIDLLR 188


>gb|ABR16599.1| unknown [Picea sitchensis]
          Length = 422

 Score =  130 bits (326), Expect = 1e-28
 Identities = 57/91 (62%), Positives = 74/91 (81%)
 Frame = +1

Query: 1   RTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCF 180
           RT+I+T LN AWAEP +M+DL LESFR+GEGT  LLN+L+IVA+D  A+ RC  IHPHC+
Sbjct: 154 RTVIITALNVAWAEPNTMIDLFLESFRVGEGTPELLNNLLIVALDAKAYDRCLEIHPHCY 213

Query: 181 NLTTPGVDFAEDERYMSENYLKLMWRRIDFL 273
            L T GVDF+ ++ YMS++YLK+MWRR+ FL
Sbjct: 214 TLKTRGVDFSAEKLYMSDDYLKMMWRRLGFL 244


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