BLASTX nr result
ID: Coptis21_contig00002377
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002377 (277 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADQ43193.1| unknown [Eutrema parvulum] 134 6e-30 gb|ACQ90601.1| putative Myb DNA binding protein [Eutrema halophi... 134 1e-29 ref|XP_002465932.1| hypothetical protein SORBIDRAFT_01g048460 [S... 130 1e-28 ref|NP_172911.1| putative myb DNA binding protein [Arabidopsis t... 130 1e-28 gb|ABR16599.1| unknown [Picea sitchensis] 130 1e-28 >gb|ADQ43193.1| unknown [Eutrema parvulum] Length = 395 Score = 134 bits (338), Expect = 6e-30 Identities = 59/91 (64%), Positives = 76/91 (83%) Frame = +1 Query: 4 TIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCFN 183 T+ILTTLN+AWA PGS++DL ESF IGEGTS LLNHLVI+A+D A++RC+ +H HCF+ Sbjct: 110 TVILTTLNEAWAAPGSVIDLFFESFGIGEGTSTLLNHLVIIALDDKAYSRCRELHKHCFS 169 Query: 184 LTTPGVDFAEDERYMSENYLKLMWRRIDFLR 276 L T GVDF+ + +M+ +YLK+MWRRIDFLR Sbjct: 170 LETEGVDFSREAYFMTRSYLKMMWRRIDFLR 200 >gb|ACQ90601.1| putative Myb DNA binding protein [Eutrema halophilum] Length = 397 Score = 134 bits (336), Expect = 1e-29 Identities = 59/91 (64%), Positives = 76/91 (83%) Frame = +1 Query: 4 TIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCFN 183 T+ILTTLN+AWA PGS++DL ESF IGEGTS LLNHLVI+A+D A++RC+ +H HCF+ Sbjct: 111 TVILTTLNEAWAAPGSVIDLFFESFGIGEGTSMLLNHLVIIALDAKAYSRCRELHKHCFS 170 Query: 184 LTTPGVDFAEDERYMSENYLKLMWRRIDFLR 276 L T GVDF+ + +M+ +YLK+MWRRIDFLR Sbjct: 171 LETEGVDFSGEAYFMTRSYLKMMWRRIDFLR 201 >ref|XP_002465932.1| hypothetical protein SORBIDRAFT_01g048460 [Sorghum bicolor] gi|241919786|gb|EER92930.1| hypothetical protein SORBIDRAFT_01g048460 [Sorghum bicolor] Length = 380 Score = 130 bits (327), Expect = 1e-28 Identities = 58/91 (63%), Positives = 73/91 (80%) Frame = +1 Query: 4 TIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCFN 183 T+ILTTLN AW+EPGS+LD+ LESFR GE T LL+HLVIV++D TA RC+ +H HCF Sbjct: 111 TVILTTLNSAWSEPGSVLDVFLESFRSGESTRELLDHLVIVSLDTTAHARCRQVHRHCFA 170 Query: 184 LTTPGVDFAEDERYMSENYLKLMWRRIDFLR 276 L T GVDF+ + +M++ YLK+MWRRIDFLR Sbjct: 171 LVTDGVDFSGQKNFMTDGYLKMMWRRIDFLR 201 >ref|NP_172911.1| putative myb DNA binding protein [Arabidopsis thaliana] gi|7527728|gb|AAF63177.1|AC010657_13 T5E21.9 [Arabidopsis thaliana] gi|332191067|gb|AEE29188.1| putative myb DNA binding protein [Arabidopsis thaliana] Length = 386 Score = 130 bits (326), Expect = 1e-28 Identities = 57/92 (61%), Positives = 75/92 (81%) Frame = +1 Query: 1 RTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCF 180 RT++LTTLN AWA PGS++DL ESFRIGE TS++L+HLVIVA+D A++RC +H HCF Sbjct: 97 RTVVLTTLNAAWAAPGSVIDLFFESFRIGEETSQILDHLVIVALDAKAYSRCLELHKHCF 156 Query: 181 NLTTPGVDFAEDERYMSENYLKLMWRRIDFLR 276 +L T GVDF+ + +M+ +YLK+MWRRID LR Sbjct: 157 SLVTEGVDFSREAYFMTRSYLKMMWRRIDLLR 188 >gb|ABR16599.1| unknown [Picea sitchensis] Length = 422 Score = 130 bits (326), Expect = 1e-28 Identities = 57/91 (62%), Positives = 74/91 (81%) Frame = +1 Query: 1 RTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCF 180 RT+I+T LN AWAEP +M+DL LESFR+GEGT LLN+L+IVA+D A+ RC IHPHC+ Sbjct: 154 RTVIITALNVAWAEPNTMIDLFLESFRVGEGTPELLNNLLIVALDAKAYDRCLEIHPHCY 213 Query: 181 NLTTPGVDFAEDERYMSENYLKLMWRRIDFL 273 L T GVDF+ ++ YMS++YLK+MWRR+ FL Sbjct: 214 TLKTRGVDFSAEKLYMSDDYLKMMWRRLGFL 244