BLASTX nr result

ID: Coptis21_contig00002373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002373
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264042.1| PREDICTED: protochlorophyllide reductase, ch...   602   e-170
ref|XP_002264000.1| PREDICTED: protochlorophyllide reductase, ch...   602   e-169
ref|XP_002284769.2| PREDICTED: protochlorophyllide reductase, ch...   597   e-168
ref|XP_002534245.1| short-chain dehydrogenase, putative [Ricinus...   597   e-168
ref|XP_002329146.1| predicted protein [Populus trichocarpa] gi|2...   596   e-168

>ref|XP_002264042.1| PREDICTED: protochlorophyllide reductase, chloroplastic isoform 2
            [Vitis vinifera] gi|297739124|emb|CBI28775.3| unnamed
            protein product [Vitis vinifera]
          Length = 399

 Score =  602 bits (1553), Expect = e-170
 Identities = 302/401 (75%), Positives = 339/401 (84%)
 Frame = +2

Query: 56   LIVMATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLS 235
            + + A S+L SA+SIHKEG SNASLK+TGF  +S+S+HLK++    + K+K  L  RKL 
Sbjct: 1    MALQAASLLPSAVSIHKEGKSNASLKETGFFEVSVSDHLKAELSLGLSKNKE-LKRRKLP 59

Query: 236  VSTVRAQSXXXXXXXXXXXXQGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMAC 415
            V  +RAQ+            +G+KTLR G+V+ITGASSGLGLATAKALAET KWH+IMAC
Sbjct: 60   VGVIRAQTATTPAISQASP-EGKKTLRKGNVIITGASSGLGLATAKALAETEKWHIIMAC 118

Query: 416  RDYLKTQRAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFRRSGRPLDALVCNAAIYQPT 595
            R++LK  RAAKSAGIAKENYT+MHLDL+SL+SV+QF DNFRRSGRPLD LVCNAA+Y PT
Sbjct: 119  RNFLKADRAAKSAGIAKENYTVMHLDLASLESVRQFADNFRRSGRPLDVLVCNAAVYLPT 178

Query: 596  AKEPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNV 775
            AKEP+FTA+GFELSVGTNHLGHF          KQ+DYPSKRLIIVGSITGNTNTLAGNV
Sbjct: 179  AKEPTFTAEGFELSVGTNHLGHFLLSRLLLDDLKQTDYPSKRLIIVGSITGNTNTLAGNV 238

Query: 776  PPKANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 955
            PPKANLGDLRG            MIDGG FDGAKAYKDSKVCNMLTMQEFHRRYHE+TGI
Sbjct: 239  PPKANLGDLRGLAGGLNGINGSPMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGI 298

Query: 956  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKS 1135
            TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKG+VSEEE+GKRLAQVV+DPSLTKS
Sbjct: 299  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVTDPSLTKS 358

Query: 1136 GVYWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1258
            GVYWSWNK+SASF+NQLSQEASD EKARK+W+ISEKLVGLA
Sbjct: 359  GVYWSWNKNSASFQNQLSQEASDAEKARKVWEISEKLVGLA 399


>ref|XP_002264000.1| PREDICTED: protochlorophyllide reductase, chloroplastic isoform 1
            [Vitis vinifera]
          Length = 397

 Score =  602 bits (1551), Expect = e-169
 Identities = 302/401 (75%), Positives = 338/401 (84%)
 Frame = +2

Query: 56   LIVMATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLS 235
            + + A S+L SA+SIHKEG SNASLK+TGF  +S+S+HLK++     L S + L  RKL 
Sbjct: 1    MALQAASLLPSAVSIHKEGKSNASLKETGFFEVSVSDHLKAELS---LASLQELKRRKLP 57

Query: 236  VSTVRAQSXXXXXXXXXXXXQGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMAC 415
            V  +RAQ+            +G+KTLR G+V+ITGASSGLGLATAKALAET KWH+IMAC
Sbjct: 58   VGVIRAQTATTPAISQASP-EGKKTLRKGNVIITGASSGLGLATAKALAETEKWHIIMAC 116

Query: 416  RDYLKTQRAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFRRSGRPLDALVCNAAIYQPT 595
            R++LK  RAAKSAGIAKENYT+MHLDL+SL+SV+QF DNFRRSGRPLD LVCNAA+Y PT
Sbjct: 117  RNFLKADRAAKSAGIAKENYTVMHLDLASLESVRQFADNFRRSGRPLDVLVCNAAVYLPT 176

Query: 596  AKEPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNV 775
            AKEP+FTA+GFELSVGTNHLGHF          KQ+DYPSKRLIIVGSITGNTNTLAGNV
Sbjct: 177  AKEPTFTAEGFELSVGTNHLGHFLLSRLLLDDLKQTDYPSKRLIIVGSITGNTNTLAGNV 236

Query: 776  PPKANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 955
            PPKANLGDLRG            MIDGG FDGAKAYKDSKVCNMLTMQEFHRRYHE+TGI
Sbjct: 237  PPKANLGDLRGLAGGLNGINGSPMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGI 296

Query: 956  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKS 1135
            TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKG+VSEEE+GKRLAQVV+DPSLTKS
Sbjct: 297  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVTDPSLTKS 356

Query: 1136 GVYWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1258
            GVYWSWNK+SASF+NQLSQEASD EKARK+W+ISEKLVGLA
Sbjct: 357  GVYWSWNKNSASFQNQLSQEASDAEKARKVWEISEKLVGLA 397


>ref|XP_002284769.2| PREDICTED: protochlorophyllide reductase, chloroplastic-like [Vitis
            vinifera] gi|302143044|emb|CBI20339.3| unnamed protein
            product [Vitis vinifera]
          Length = 396

 Score =  597 bits (1540), Expect = e-168
 Identities = 297/401 (74%), Positives = 336/401 (83%)
 Frame = +2

Query: 56   LIVMATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLS 235
            + + A +++ SA SI KEG  +AS K++G  G+SLS+H+K+DF    L++KR     K S
Sbjct: 1    MAMQAAALVPSAFSIPKEGKGSASFKESGLFGVSLSDHVKADFSSSALRNKR-----KPS 55

Query: 236  VSTVRAQSXXXXXXXXXXXXQGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMAC 415
            V  +RAQ+            +G+KTLR G+VVITGASSGLGLAT KALAETGKWH+IMAC
Sbjct: 56   VGAIRAQTAATTPAITRATPEGKKTLRKGTVVITGASSGLGLATTKALAETGKWHIIMAC 115

Query: 416  RDYLKTQRAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFRRSGRPLDALVCNAAIYQPT 595
            RD+LK +RAA+SAG++KENYT+MHLDL+SLDSV+QFVDNF+RS RPLD LVCNAA+Y PT
Sbjct: 116  RDFLKAERAARSAGLSKENYTVMHLDLASLDSVRQFVDNFKRSERPLDVLVCNAAVYLPT 175

Query: 596  AKEPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNV 775
            AKEP+FTADGFELSVGTNHLGHF          KQSDYPSKRLIIVGSITGNTNTLAGNV
Sbjct: 176  AKEPTFTADGFELSVGTNHLGHFLLARLLLDDLKQSDYPSKRLIIVGSITGNTNTLAGNV 235

Query: 776  PPKANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 955
            PPKANLGDLRG           AMIDGG FDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI
Sbjct: 236  PPKANLGDLRGMAGGLNGLNSSAMIDGGAFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGI 295

Query: 956  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKS 1135
            TFASLYPGCIATTGLFREHIPLFRLLFPPFQK+ITKG+VSEEESGKRLAQVVS+PSLTKS
Sbjct: 296  TFASLYPGCIATTGLFREHIPLFRLLFPPFQKFITKGYVSEEESGKRLAQVVSEPSLTKS 355

Query: 1136 GVYWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1258
            GVYWSWNK+SASFENQLSQEASD +KARK+W++SEKLV LA
Sbjct: 356  GVYWSWNKNSASFENQLSQEASDADKARKVWELSEKLVRLA 396


>ref|XP_002534245.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223525646|gb|EEF28135.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 396

 Score =  597 bits (1539), Expect = e-168
 Identities = 299/399 (74%), Positives = 335/399 (83%), Gaps = 1/399 (0%)
 Frame = +2

Query: 65   MATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLSVST 244
            MA+S++SS   + KEG S+AS KD+   G+SLS+HLK+D      + KR  N R   V  
Sbjct: 1    MASSLVSSTFVVLKEGKSSASFKDSSLFGVSLSDHLKADHSSSAFRFKREPNQR---VGA 57

Query: 245  VRAQSXXXXXXXXXXXX-QGRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMACRD 421
            VRAQ+             +G+KTLR GSV++TGASSGLGLATAKALAETGKWH+IMACRD
Sbjct: 58   VRAQTMATASPAVNRAAPEGKKTLRKGSVIVTGASSGLGLATAKALAETGKWHIIMACRD 117

Query: 422  YLKTQRAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFRRSGRPLDALVCNAAIYQPTAK 601
            +LKT+RAAKSAGI+KENYTIMHLDL+SLDSV+QFVDNF+RSGRPLD LVCNAA+Y PTAK
Sbjct: 118  FLKTERAAKSAGISKENYTIMHLDLASLDSVRQFVDNFKRSGRPLDVLVCNAAVYLPTAK 177

Query: 602  EPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGNVPP 781
            EP+FTA+GFELSVGTNHLGHF          ++SDYPSKRLIIVGSITGNTNTLAGNVPP
Sbjct: 178  EPTFTAEGFELSVGTNHLGHFLLSRLLLEDLQKSDYPSKRLIIVGSITGNTNTLAGNVPP 237

Query: 782  KANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGITF 961
            KANLGD+RG           AMIDGGNFDGAKAYKDSKVCNML MQEFHRR+HE+TGITF
Sbjct: 238  KANLGDMRGLAGGLNGLNSSAMIDGGNFDGAKAYKDSKVCNMLIMQEFHRRFHEETGITF 297

Query: 962  ASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTKSGV 1141
            ASLYPGCIATTGLFREHIPLFR LFPPFQKYITKG+VSE+E+GKRLAQVVSDPSLTKSGV
Sbjct: 298  ASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGV 357

Query: 1142 YWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1258
            YWSWNKDSASFENQLSQEASD +KARK+W+ISEKLVGLA
Sbjct: 358  YWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 396


>ref|XP_002329146.1| predicted protein [Populus trichocarpa] gi|222869815|gb|EEF06946.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  596 bits (1537), Expect = e-168
 Identities = 303/402 (75%), Positives = 334/402 (83%), Gaps = 1/402 (0%)
 Frame = +2

Query: 56   LIVMATSILSSALSIHKEGTSNASLKDTGFLGISLSNHLKSDFFPPVLKSKRTLNHRKLS 235
            + + A S++SSA  + KEG S+ASLK++  LG+SLS+H+K+DF    LK KR  N R   
Sbjct: 1    MALQAASLVSSAFVVPKEGKSSASLKESSLLGVSLSDHVKADFSSSTLKWKREFNQR--- 57

Query: 236  VSTVRAQSXXXXXXXXXXXXQ-GRKTLRTGSVVITGASSGLGLATAKALAETGKWHVIMA 412
            V TVRAQS              G+KTLR G  ++TGASSGLGLA AKALAETGKWHVIMA
Sbjct: 58   VRTVRAQSMATATPAVNRASSDGKKTLRQGCCIVTGASSGLGLAAAKALAETGKWHVIMA 117

Query: 413  CRDYLKTQRAAKSAGIAKENYTIMHLDLSSLDSVKQFVDNFRRSGRPLDALVCNAAIYQP 592
            CRD+LK +RAAKSAGIAKEN TIMHLDL+SLDSV+QFVD F+RSGR LD LVCNAA+Y P
Sbjct: 118  CRDFLKAERAAKSAGIAKENCTIMHLDLASLDSVRQFVDTFKRSGRALDVLVCNAAVYLP 177

Query: 593  TAKEPSFTADGFELSVGTNHLGHFXXXXXXXXXXKQSDYPSKRLIIVGSITGNTNTLAGN 772
            TAKEP+FTA+GFELSVGTNHLGHF          K+SDYPSKRLIIVGSITGNTNTLAGN
Sbjct: 178  TAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDMKKSDYPSKRLIIVGSITGNTNTLAGN 237

Query: 773  VPPKANLGDLRGFXXXXXXXXXXAMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEDTG 952
            VPPKANLGDLRG           AMIDGG FDGAKAYKDSKVCNMLTMQEFHRR+HE+TG
Sbjct: 238  VPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRFHEETG 297

Query: 953  ITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEESGKRLAQVVSDPSLTK 1132
            ITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEE++GKRLAQVVSDPSLTK
Sbjct: 298  ITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEEDAGKRLAQVVSDPSLTK 357

Query: 1133 SGVYWSWNKDSASFENQLSQEASDVEKARKMWDISEKLVGLA 1258
            SGVYWSWNKDSASFENQLSQEASD EKARK+W++SEKLVGLA
Sbjct: 358  SGVYWSWNKDSASFENQLSQEASDEEKARKVWEVSEKLVGLA 399


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