BLASTX nr result

ID: Coptis21_contig00002370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002370
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053678.1| Os04g0585400 [Oryza sativa Japonica Group] g...   348   1e-93
ref|XP_002270793.2| PREDICTED: uncharacterized protein At4g15970...   347   3e-93
ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|2...   346   9e-93
emb|CAH66858.1| H0307D04.3 [Oryza sativa Indica Group]                346   9e-93
gb|EAY95314.1| hypothetical protein OsI_17140 [Oryza sativa Indi...   343   8e-92

>ref|NP_001053678.1| Os04g0585400 [Oryza sativa Japonica Group]
            gi|38344278|emb|CAE03761.2| OSJNBa0013K16.10 [Oryza
            sativa Japonica Group] gi|113565249|dbj|BAF15592.1|
            Os04g0585400 [Oryza sativa Japonica Group]
          Length = 362

 Score =  348 bits (894), Expect = 1e-93
 Identities = 156/288 (54%), Positives = 206/288 (71%)
 Frame = +3

Query: 183  ELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAMDPT 362
            +L +VL+ ASM D T+ILTTLN AWA PGS++DL ++SFR G  TS L+NHLVI+A D  
Sbjct: 79   KLEQVLQKASMGDNTVILTTLNSAWASPGSVIDLFIDSFRSGVRTSSLINHLVIIAFDWN 138

Query: 363  AFTRCKAIHPHCFYLTTPGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFTDAD 542
            A+ +C  IHP+CF L T G+DFSE++RF++  YL++MW+RIDFLR+VLE G++F+F+DAD
Sbjct: 139  AYKQCLKIHPYCFALGTDGVDFSEEKRFLTSGYLEMMWKRIDFLRLVLESGFSFIFSDAD 198

Query: 543  IMWFRDPFPYFDSVDEIHIACDFYKGNPRDKGNRANGGFNYVKSVGATIEFYKYWYKARR 722
            IMWFR PFPYF    +  IACD Y GN  D  N ANGGFNYVKS   +IEFY +WY +R 
Sbjct: 199  IMWFRSPFPYFYPDGDFQIACDHYFGNATDLRNIANGGFNYVKSNERSIEFYSFWYSSRL 258

Query: 723  LHKNQHDQQVFEIIKHEPIVAATGLRIRYLDTKYFGGFCQASKDMNKVCTMHANCCVGIE 902
             +   HDQ VF +IKH+P V+  GL+I++L T YFGGFC+ S+D+NKVCTMHANCC+G++
Sbjct: 259  RYPGLHDQDVFNVIKHDPYVSDIGLKIKFLSTSYFGGFCEPSRDLNKVCTMHANCCIGLQ 318

Query: 903  KKVPDLKAILNDWKNFTALSPQEKEAKGXXXXXXXXXXXNKCKASWKH 1046
             KVPDL+ ++ DW+++ +L P  K                 C  SW H
Sbjct: 319  SKVPDLRVMMEDWRSYLSLPPSLKRLSA-----LAWRVPQNCSLSWSH 361


>ref|XP_002270793.2| PREDICTED: uncharacterized protein At4g15970-like [Vitis vinifera]
          Length = 346

 Score =  347 bits (891), Expect = 3e-93
 Identities = 155/264 (58%), Positives = 198/264 (75%)
 Frame = +3

Query: 174 EREELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAM 353
           E  +L ++LKNA+M D+T+ILTT+N+AWA   S+LDL LESFRIG  T RLLNHLVI+ +
Sbjct: 57  EGYKLDKILKNAAMGDKTVILTTVNEAWAANNSLLDLFLESFRIGNNTQRLLNHLVIITL 116

Query: 354 DPTAFTRCKAIHPHCFYLTTPGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFT 533
           DP A+ RC  +HPHC+ L T  +DFS++  FMS +YL++MWRRIDFLR VL++ YNF+FT
Sbjct: 117 DPKAYARCTTLHPHCYALKTKEMDFSKEAFFMSHDYLEMMWRRIDFLRSVLKMRYNFIFT 176

Query: 534 DADIMWFRDPFPYFDSVDEIHIACDFYKGNPRDKGNRANGGFNYVKSVGATIEFYKYWYK 713
           DADIMWFRDPF  FDS  +  IACD++ GN  D  N  NGGF YVKS   TI+FYK+WY 
Sbjct: 177 DADIMWFRDPFQRFDSKADFQIACDYFNGNSSDVNNSPNGGFTYVKSNDRTIKFYKFWYS 236

Query: 714 ARRLHKNQHDQQVFEIIKHEPIVAATGLRIRYLDTKYFGGFCQASKDMNKVCTMHANCCV 893
           +R  +   HDQ V   IKH+P +   GL++R+LDT YFGGFCQ SKD+N VCTMHANCCV
Sbjct: 237 SRVNYPGNHDQDVLNKIKHDPFITKIGLKMRFLDTAYFGGFCQRSKDLNLVCTMHANCCV 296

Query: 894 GIEKKVPDLKAILNDWKNFTALSP 965
           G+  K+ DL  +L+DW+ FT+ +P
Sbjct: 297 GLGNKIHDLGIMLHDWRKFTSFTP 320


>ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|222870602|gb|EEF07733.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  346 bits (887), Expect = 9e-93
 Identities = 159/264 (60%), Positives = 198/264 (75%)
 Frame = +3

Query: 183 ELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAMDPT 362
           ELGRVL  ASM   T+ILTTLN AWAEPGS+ DL LESF+IGE T  LLN+LVI+++D  
Sbjct: 79  ELGRVLNKASMKGNTVILTTLNDAWAEPGSIFDLFLESFQIGEKTKELLNNLVIISLDQK 138

Query: 363 AFTRCKAIHPHCFYLTTPGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFTDAD 542
           A  RC AIHPHC+ L T G++F+ +  FMSE+YLK+MWRRI+FL  VLE+GY+FVFTDAD
Sbjct: 139 AHARCLAIHPHCYALKTEGLNFTREASFMSEDYLKMMWRRIEFLNTVLEMGYSFVFTDAD 198

Query: 543 IMWFRDPFPYFDSVDEIHIACDFYKGNPRDKGNRANGGFNYVKSVGATIEFYKYWYKARR 722
           IMW R+PFP F    +  IACD Y GNP+DK NR NGGF YV+S   TI FY++W+ +R+
Sbjct: 199 IMWLRNPFPRFYPRVDFQIACDKYYGNPKDKSNRPNGGFTYVRSNLRTILFYRFWFMSRK 258

Query: 723 LHKNQHDQQVFEIIKHEPIVAATGLRIRYLDTKYFGGFCQASKDMNKVCTMHANCCVGIE 902
            +   HDQ V   IK++ ++    L +R+LDT YFGGFC+ SKD NKVCTMHANCC G+E
Sbjct: 259 TYPGNHDQDVLNKIKNDRVLEKIELTMRFLDTAYFGGFCERSKDFNKVCTMHANCCYGLE 318

Query: 903 KKVPDLKAILNDWKNFTALSPQEK 974
            KV DLK +L DWKN+T+L P E+
Sbjct: 319 TKVHDLKIVLEDWKNYTSLPPNER 342


>emb|CAH66858.1| H0307D04.3 [Oryza sativa Indica Group]
          Length = 362

 Score =  346 bits (887), Expect = 9e-93
 Identities = 156/288 (54%), Positives = 205/288 (71%)
 Frame = +3

Query: 183  ELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAMDPT 362
            +L +VL+ ASM D T+ILTTLN AWA PGS++DL ++SFR G  TS LLNHLVI+A D  
Sbjct: 79   KLEQVLQKASMGDNTVILTTLNSAWASPGSVIDLFIDSFRSGVRTSSLLNHLVIIAFDWN 138

Query: 363  AFTRCKAIHPHCFYLTTPGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFTDAD 542
            A+ +C  IHP+CF L T G+DFSE++RF++  YL++MW+RIDFLR+VLE G++F+F+DAD
Sbjct: 139  AYKQCLKIHPYCFALGTDGVDFSEEKRFLTSGYLEMMWKRIDFLRLVLESGFSFIFSDAD 198

Query: 543  IMWFRDPFPYFDSVDEIHIACDFYKGNPRDKGNRANGGFNYVKSVGATIEFYKYWYKARR 722
            IMWFR PFPYF    +  IACD Y GN  D  N ANGGFNYVKS   +IEFY +WY +R 
Sbjct: 199  IMWFRSPFPYFYPDGDFQIACDHYFGNATDLRNIANGGFNYVKSNERSIEFYSFWYSSRL 258

Query: 723  LHKNQHDQQVFEIIKHEPIVAATGLRIRYLDTKYFGGFCQASKDMNKVCTMHANCCVGIE 902
             +   HDQ VF +IKH+P V+  GL+I++L T YFGGFC+ S+D+NKVCTMHANCC+G++
Sbjct: 259  RYPGLHDQDVFNVIKHDPYVSDIGLKIKFLSTSYFGGFCEPSRDLNKVCTMHANCCIGLQ 318

Query: 903  KKVPDLKAILNDWKNFTALSPQEKEAKGXXXXXXXXXXXNKCKASWKH 1046
             KV DL+ ++ DW+++ +L P  K                 C  SW H
Sbjct: 319  SKVHDLRVMMEDWRSYLSLPPSLKRLSA-----LAWRVPQNCSLSWSH 361


>gb|EAY95314.1| hypothetical protein OsI_17140 [Oryza sativa Indica Group]
          Length = 357

 Score =  343 bits (879), Expect = 8e-92
 Identities = 152/264 (57%), Positives = 201/264 (76%)
 Frame = +3

Query: 183 ELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAMDPT 362
           +L +VL+ ASM D T+ILTTLN AWA PGS++DL ++SFR G  TS LLNHLVI+A D  
Sbjct: 79  KLEQVLQKASMGDNTVILTTLNSAWASPGSVIDLFIDSFRSGVRTSSLLNHLVIIAFDWN 138

Query: 363 AFTRCKAIHPHCFYLTTPGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFTDAD 542
           A+ +C  IHP+CF L T G+DFSE++RF++  YL++MW+RIDFLR+VLE G++F+F+DAD
Sbjct: 139 AYKQCLKIHPYCFALGTDGVDFSEEKRFLTSGYLEMMWKRIDFLRLVLESGFSFIFSDAD 198

Query: 543 IMWFRDPFPYFDSVDEIHIACDFYKGNPRDKGNRANGGFNYVKSVGATIEFYKYWYKARR 722
           IMWFR PFPYF    +  IACD Y GN  D  N ANGGFNYVKS   +IEFY +WY +R 
Sbjct: 199 IMWFRSPFPYFYPDGDFQIACDHYFGNATDLRNIANGGFNYVKSNERSIEFYSFWYSSRL 258

Query: 723 LHKNQHDQQVFEIIKHEPIVAATGLRIRYLDTKYFGGFCQASKDMNKVCTMHANCCVGIE 902
            +   HDQ VF +IKH+P V+  GL+I++L T YFGGFC+ S+D+NKVCTMHANCC+G++
Sbjct: 259 RYPGLHDQDVFNVIKHDPYVSDIGLKIKFLSTSYFGGFCEPSRDLNKVCTMHANCCIGLQ 318

Query: 903 KKVPDLKAILNDWKNFTALSPQEK 974
            KV DL+ ++ DW+++ +L P  K
Sbjct: 319 SKVHDLRVMMEDWRSYLSLPPSLK 342


Top