BLASTX nr result

ID: Coptis21_contig00002364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002364
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135993.1| PREDICTED: GTP-binding protein SAR1A-like [C...   103   1e-23
ref|XP_002889409.1| Os01g0254000 [Arabidopsis lyrata subsp. lyra...   101   1e-23
ref|NP_171762.1| Ras-related small GTP-binding protein [Arabidop...   101   1e-23
ref|XP_002275765.1| PREDICTED: GTP-binding protein SAR1A [Vitis ...   102   2e-23
ref|XP_002515297.1| GTP-binding protein sar1, putative [Ricinus ...   102   2e-23

>ref|XP_004135993.1| PREDICTED: GTP-binding protein SAR1A-like [Cucumis sativus]
           gi|449505318|ref|XP_004162434.1| PREDICTED: GTP-binding
           protein SAR1A-like [Cucumis sativus]
          Length = 193

 Score =  103 bits (257), Expect(2) = 1e-23
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = -3

Query: 530 IPYAASEEELRFHLGLTNFTTGKGKVNLADTNVRPLEVFMCSIVRKMGYGE 378
           IPYAASE+ELR+HLGLTNFTTGKGKVNLADTNVRPLEVFMCSIVRKMGYG+
Sbjct: 133 IPYAASEDELRYHLGLTNFTTGKGKVNLADTNVRPLEVFMCSIVRKMGYGD 183



 Score = 31.2 bits (69), Expect(2) = 1e-23
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 304 YGEGFKWLSQYIK 266
           YG+GFKW+SQYIK
Sbjct: 181 YGDGFKWVSQYIK 193


>ref|XP_002889409.1| Os01g0254000 [Arabidopsis lyrata subsp. lyrata]
           gi|297335251|gb|EFH65668.1| Os01g0254000 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 193

 Score =  101 bits (251), Expect(2) = 1e-23
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -3

Query: 530 IPYAASEEELRFHLGLTNFTTGKGKVNLADTNVRPLEVFMCSIVRKMGYGE 378
           IPYAASE+ELRFHLGL+NFTTGKGKVNL D+NVRPLEVFMCSIVRKMGYGE
Sbjct: 133 IPYAASEDELRFHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGE 183



 Score = 33.5 bits (75), Expect(2) = 1e-23
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 304 YGEGFKWLSQYIK 266
           YGEGFKWLSQYIK
Sbjct: 181 YGEGFKWLSQYIK 193


>ref|NP_171762.1| Ras-related small GTP-binding protein [Arabidopsis thaliana]
           gi|332189329|gb|AEE27450.1| Ras-related small
           GTP-binding protein [Arabidopsis thaliana]
          Length = 122

 Score =  101 bits (251), Expect(2) = 1e-23
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -3

Query: 530 IPYAASEEELRFHLGLTNFTTGKGKVNLADTNVRPLEVFMCSIVRKMGYGE 378
           IPYAASE+ELRFHLGL+NFTTGKGKVNL D+NVRPLEVFMCSIVRKMGYGE
Sbjct: 62  IPYAASEDELRFHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGE 112



 Score = 33.5 bits (75), Expect(2) = 1e-23
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 304 YGEGFKWLSQYIK 266
           YGEGFKWLSQYIK
Sbjct: 110 YGEGFKWLSQYIK 122


>ref|XP_002275765.1| PREDICTED: GTP-binding protein SAR1A [Vitis vinifera]
           gi|297743967|emb|CBI36937.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  102 bits (253), Expect(2) = 2e-23
 Identities = 47/51 (92%), Positives = 51/51 (100%)
 Frame = -3

Query: 530 IPYAASEEELRFHLGLTNFTTGKGKVNLADTNVRPLEVFMCSIVRKMGYGE 378
           IPYAASE+ELR+HLGLTNFTTGKGKVNLAD+NVRPLEVFMCSIVRKMGYG+
Sbjct: 133 IPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGD 183



 Score = 32.3 bits (72), Expect(2) = 2e-23
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 304 YGEGFKWLSQYIK 266
           YG+GFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193


>ref|XP_002515297.1| GTP-binding protein sar1, putative [Ricinus communis]
           gi|223545777|gb|EEF47281.1| GTP-binding protein sar1,
           putative [Ricinus communis]
          Length = 193

 Score =  102 bits (253), Expect(2) = 2e-23
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -3

Query: 530 IPYAASEEELRFHLGLTNFTTGKGKVNLADTNVRPLEVFMCSIVRKMGYGE 378
           IPYAASE+ELR+HLGLTNFTTGKGKVNL DTNVRPLEVFMCSIVRKMGYG+
Sbjct: 133 IPYAASEDELRYHLGLTNFTTGKGKVNLTDTNVRPLEVFMCSIVRKMGYGD 183



 Score = 32.3 bits (72), Expect(2) = 2e-23
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 304 YGEGFKWLSQYIK 266
           YG+GFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193


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