BLASTX nr result

ID: Coptis21_contig00002363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002363
         (1677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   526   e-147
emb|CBI18269.3| unnamed protein product [Vitis vinifera]              486   e-135
ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132
ref|XP_004171019.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   475   e-131
ref|XP_004138647.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   475   e-131

>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
          Length = 446

 Score =  526 bits (1354), Expect = e-147
 Identities = 280/445 (62%), Positives = 323/445 (72%)
 Frame = -2

Query: 1376 VVFILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPIDAC 1197
            +V + C F++L+ S   +NVVLIG NVTLS + ++ANFA  VK SGECG+LY+AEP+DAC
Sbjct: 6    LVLLFCAFLNLMASVAFANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAEPLDAC 65

Query: 1196 SPLTNKIVPVEGVEGAARSPYVLIVRGGCTFEDKVRRAQNAGFEAAIIYDNEYDDRMIAM 1017
            SPLTN +  VEG    A SP+VLIVRGGC FEDKVR AQ AGF AAI+YDNE    ++AM
Sbjct: 66   SPLTNAVEKVEG----ASSPFVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVAM 121

Query: 1016 AGNSAGIKIHAVFISRASGEVLKKFDGYFNLEIWLIPTFENSTWSIMAISFISLLAMSAV 837
            AGNSAGIKIHAVF+S+ASG VL+ + G  ++E+W+IP+FENS WSIMAISFISLLAMSAV
Sbjct: 122  AGNSAGIKIHAVFVSKASGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSAV 181

Query: 836  LATCFFVXXXXXXXXXXXXXXXREFHGMSSRLVRAMPSLIFTAVLEDNSTSRTCAICLED 657
            LATCFFV               REFHGMSSRLV+AMPSLIFT VLEDN TSRTCAICLED
Sbjct: 182  LATCFFVRRHRIRRQRPRVSRVREFHGMSSRLVKAMPSLIFTTVLEDNCTSRTCAICLED 241

Query: 656  YIVGERIRILPCRHKFHATCVDAWLTSWRTFCPVCKRDARTGTGDXXXXXXXXXXXXXXX 477
            Y VGE++RILPCRHKFHA CVD+WLTSWRTFCPVCKRDART TGD               
Sbjct: 242  YNVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGD-PPSESTPLLSSSPG 300

Query: 476  XXXXXXXXXXXXXXXXXXXAIHIGQAXXXXXXXXXXXXXXXXSTPYLSQSRRSYSNSPAL 297
                               AIHI  +                +TPY+ QS +SY  S +L
Sbjct: 301  SLAPSSLVSSVRSSLASSSAIHIAPSPSPSHSLSVSRNNSLSATPYIQQSLQSYRQS-SL 359

Query: 296  SQSRSSVDLRNASSQRSYASQLVASQSLGYPSLSPLNSRYISPYLPSSSNASPSYVGSSS 117
            S SRSS+DLRNASSQRS+AS LV+  S+GYPSLSPLNSRY+SPY+PS SNAS SYVGSSS
Sbjct: 360  SVSRSSLDLRNASSQRSHASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNASLSYVGSSS 419

Query: 116  RQPYLLHCSESATSFSPFASAQSLP 42
            R P+ LH SESATSFSP+ SAQSLP
Sbjct: 420  RPPHPLHYSESATSFSPYTSAQSLP 444


>emb|CBI18269.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  486 bits (1251), Expect = e-135
 Identities = 262/428 (61%), Positives = 297/428 (69%)
 Frame = -2

Query: 1325 SNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPIDACSPLTNKIVPVEGVEGAA 1146
            +NVVLIG NVTLS + ++ANFA  VK SGECG+LY+AEP+DACSPLTN +  VEG    A
Sbjct: 7    ANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAEPLDACSPLTNAVEKVEG----A 62

Query: 1145 RSPYVLIVRGGCTFEDKVRRAQNAGFEAAIIYDNEYDDRMIAMAGNSAGIKIHAVFISRA 966
             SP+VLIVRGGC FEDKVR AQ AGF AAI+YDNE    ++AMAGNSAGIKIHAVF+S+A
Sbjct: 63   SSPFVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVAMAGNSAGIKIHAVFVSKA 122

Query: 965  SGEVLKKFDGYFNLEIWLIPTFENSTWSIMAISFISLLAMSAVLATCFFVXXXXXXXXXX 786
            SG VL+ + G  ++E+W+IP+FENS WSIMAISFISLLAMSAVLATCFFV          
Sbjct: 123  SGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRQRP 182

Query: 785  XXXXXREFHGMSSRLVRAMPSLIFTAVLEDNSTSRTCAICLEDYIVGERIRILPCRHKFH 606
                 REFHGMSSRLV+AMPSLIFT VLEDN TSRTCAICLEDY VGE++RILPCRHKFH
Sbjct: 183  RVSRVREFHGMSSRLVKAMPSLIFTTVLEDNCTSRTCAICLEDYNVGEKLRILPCRHKFH 242

Query: 605  ATCVDAWLTSWRTFCPVCKRDARTGTGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 426
            A CVD+WLTSWRTFCPVCKRDART TGD                                
Sbjct: 243  AFCVDSWLTSWRTFCPVCKRDARTSTGD-PPSESTPLLSSSPGSLAPSSLVSSVRSSLAS 301

Query: 425  XXAIHIGQAXXXXXXXXXXXXXXXXSTPYLSQSRRSYSNSPALSQSRSSVDLRNASSQRS 246
              AIHI  +                +TPY+ Q                     NASSQRS
Sbjct: 302  SSAIHIAPSPSPSHSLSVSRNNSLSATPYIQQ---------------------NASSQRS 340

Query: 245  YASQLVASQSLGYPSLSPLNSRYISPYLPSSSNASPSYVGSSSRQPYLLHCSESATSFSP 66
            +AS LV+  S+GYPSLSPLNSRY+SPY+PS SNAS SYVGSSSR P+ LH SESATSFSP
Sbjct: 341  HASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNASLSYVGSSSRPPHPLHYSESATSFSP 400

Query: 65   FASAQSLP 42
            + SAQSLP
Sbjct: 401  YTSAQSLP 408


>ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1|
            predicted protein [Populus trichocarpa]
          Length = 437

 Score =  478 bits (1231), Expect = e-132
 Identities = 263/448 (58%), Positives = 310/448 (69%), Gaps = 1/448 (0%)
 Frame = -2

Query: 1382 GGVVFILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPID 1203
            G VV +L +    L +S   NV+LIG NVT++ + +EANFA  +K SGECGVLY+AEPID
Sbjct: 3    GVVVLLLSLLSCCLVAS--GNVLLIGNNVTMAFDDIEANFAPAIKGSGECGVLYLAEPID 60

Query: 1202 ACSPLTNKIVPVEGVEGA-ARSPYVLIVRGGCTFEDKVRRAQNAGFEAAIIYDNEYDDRM 1026
            ACS LTN     +  +G+   SP+VLI+R GC+FEDKVRRAQ AG++AAIIYDNE +  +
Sbjct: 61   ACSDLTN-----QAEKGSNCSSPFVLIIREGCSFEDKVRRAQKAGYKAAIIYDNE-EGIL 114

Query: 1025 IAMAGNSAGIKIHAVFISRASGEVLKKFDGYFNLEIWLIPTFENSTWSIMAISFISLLAM 846
            +AMAGNSAG+ I AVF+S+ SGE LKK+ G  +LE+W+IP+FENS WSIMAISFISLLAM
Sbjct: 115  VAMAGNSAGVTIPAVFVSKTSGETLKKYAGLTDLELWIIPSFENSAWSIMAISFISLLAM 174

Query: 845  SAVLATCFFVXXXXXXXXXXXXXXXREFHGMSSRLVRAMPSLIFTAVLEDNSTSRTCAIC 666
            SAVLATCFFV               REFHGMSSRLV+AMPSL FT+ LEDN TS TCAIC
Sbjct: 175  SAVLATCFFVRRHRIRRERPRSSRVREFHGMSSRLVKAMPSLTFTSALEDNCTSTTCAIC 234

Query: 665  LEDYIVGERIRILPCRHKFHATCVDAWLTSWRTFCPVCKRDARTGTGDXXXXXXXXXXXX 486
            LEDY VGE++RILPCRHKFHA CVD+WLT+WRTFCPVCKRDART TG+            
Sbjct: 235  LEDYTVGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGEPPATESTPLLSS 294

Query: 485  XXXXXXXXXXXXXXXXXXXXXXAIHIGQAXXXXXXXXXXXXXXXXSTPYLSQSRRSYSNS 306
                                   I   +                 STPY  QS RSY +S
Sbjct: 295  NPSSLASSSMLSSFRSGTSTAIQITPSRT------PSVSYIPSLSSTPYAQQSLRSYRHS 348

Query: 305  PALSQSRSSVDLRNASSQRSYASQLVASQSLGYPSLSPLNSRYISPYLPSSSNASPSYVG 126
            P+++ S+SS DLRN SS RS AS LV+  SLGYPS+SPLN+RY+S Y+PS SNASPS V 
Sbjct: 349  PSITLSQSSADLRNMSSLRSRASFLVSPHSLGYPSISPLNTRYMSAYIPSPSNASPSLV- 407

Query: 125  SSSRQPYLLHCSESATSFSPFASAQSLP 42
            SSSRQP  LHCSESA SFSPFASA SLP
Sbjct: 408  SSSRQPRPLHCSESAASFSPFASAHSLP 435


>ref|XP_004171019.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis sativus]
          Length = 463

 Score =  475 bits (1223), Expect = e-131
 Identities = 262/451 (58%), Positives = 307/451 (68%), Gaps = 9/451 (1%)
 Frame = -2

Query: 1367 ILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPIDACSPL 1188
            +L   + +L S   +NVVLIG NVTLS +S+EANFA  +++SGE GVLY+A+P+DACS L
Sbjct: 19   LLFSLLLVLSSGSAANVVLIGANVTLSFDSIEANFAPSIESSGEPGVLYLAKPLDACSTL 78

Query: 1187 TNKIVPVEGVEGAARSPYVLIVRGGCTFEDKVRRAQNAGFEAAIIYDNEYDDRMIAMAGN 1008
             NK+V    V     SP+ LIVRGGC+FEDKVRRAQ AGF+AAIIYDNE D  +IAMAG+
Sbjct: 79   ENKVV----VPVNTSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNE-DGGLIAMAGS 133

Query: 1007 SAGIKIHAVFISRASGEVLKKFDGYFNLEIWLIPTFENSTWSIMAISFISLLAMSAVLAT 828
            SAGI+IHAVF+++ SGE LKK+ G  N+EIW++P+FENS WSIMAISFISLLAMSAVLAT
Sbjct: 134  SAGIRIHAVFVTKTSGETLKKYAGLANVEIWIVPSFENSAWSIMAISFISLLAMSAVLAT 193

Query: 827  CFFVXXXXXXXXXXXXXXXREFHGMSSRLVRAMPSLIFTAVLEDNSTSRTCAICLEDYIV 648
            CFFV               +EF GMS R+V+AMPSLIFT  LEDN TS TCAICLEDY  
Sbjct: 194  CFFVRRHRIRRGRPRSSHTQEFRGMSRRVVKAMPSLIFTTALEDNCTSMTCAICLEDYTP 253

Query: 647  GERIRILPCRHKFHATCVDAWLTSWRTFCPVCKRDARTGTGDXXXXXXXXXXXXXXXXXX 468
            GE++RILPCRHKFHA CVD+WLT+WRTFCPVCKRDART TGD                  
Sbjct: 254  GEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGDPPPSASTPLLSSAPSSVA 313

Query: 467  XXXXXXXXXXXXXXXXAIHIGQAXXXXXXXXXXXXXXXXSTPYLSQS---------RRSY 315
                            AI I  A                STPYL QS         R SY
Sbjct: 314  SSSILSSSRSSLPPSSAIQISPA---LRSPSVSRNHSLSSTPYLHQSLISSYHQSPRSSY 370

Query: 314  SNSPALSQSRSSVDLRNASSQRSYASQLVASQSLGYPSLSPLNSRYISPYLPSSSNASPS 135
              SP+LS SRSSV+LRNASSQRSY S L++  S  YPS+SPL+SRY+ P++PS SNASPS
Sbjct: 371  HQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYMIPHIPSPSNASPS 430

Query: 134  YVGSSSRQPYLLHCSESATSFSPFASAQSLP 42
             +GSSS Q   LHCS SA S SPFAS +SLP
Sbjct: 431  IIGSSSHQHNPLHCSGSAASLSPFASTRSLP 461


>ref|XP_004138647.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis sativus]
          Length = 451

 Score =  475 bits (1223), Expect = e-131
 Identities = 262/451 (58%), Positives = 307/451 (68%), Gaps = 9/451 (1%)
 Frame = -2

Query: 1367 ILCIFVSLLFSSVESNVVLIGRNVTLSLESMEANFAVQVKNSGECGVLYIAEPIDACSPL 1188
            +L   + +L S   +NVVLIG NVTLS +S+EANFA  +++SGE GVLY+A+P+DACS L
Sbjct: 7    LLFSLLLVLSSGSAANVVLIGANVTLSFDSIEANFAPSIESSGEPGVLYLAKPLDACSTL 66

Query: 1187 TNKIVPVEGVEGAARSPYVLIVRGGCTFEDKVRRAQNAGFEAAIIYDNEYDDRMIAMAGN 1008
             NK+V    V     SP+ LIVRGGC+FEDKVRRAQ AGF+AAIIYDNE D  +IAMAG+
Sbjct: 67   ENKVV----VPVNTSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNE-DGGLIAMAGS 121

Query: 1007 SAGIKIHAVFISRASGEVLKKFDGYFNLEIWLIPTFENSTWSIMAISFISLLAMSAVLAT 828
            SAGI+IHAVF+++ SGE LKK+ G  N+EIW++P+FENS WSIMAISFISLLAMSAVLAT
Sbjct: 122  SAGIRIHAVFVTKTSGETLKKYAGLANVEIWIVPSFENSAWSIMAISFISLLAMSAVLAT 181

Query: 827  CFFVXXXXXXXXXXXXXXXREFHGMSSRLVRAMPSLIFTAVLEDNSTSRTCAICLEDYIV 648
            CFFV               +EF GMS R+V+AMPSLIFT  LEDN TS TCAICLEDY  
Sbjct: 182  CFFVRRHRIRRGRPRSSHTQEFRGMSRRVVKAMPSLIFTTALEDNCTSMTCAICLEDYTP 241

Query: 647  GERIRILPCRHKFHATCVDAWLTSWRTFCPVCKRDARTGTGDXXXXXXXXXXXXXXXXXX 468
            GE++RILPCRHKFHA CVD+WLT+WRTFCPVCKRDART TGD                  
Sbjct: 242  GEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGDPPPSASTPLLSSAPSSVA 301

Query: 467  XXXXXXXXXXXXXXXXAIHIGQAXXXXXXXXXXXXXXXXSTPYLSQS---------RRSY 315
                            AI I  A                STPYL QS         R SY
Sbjct: 302  SSSILSSSRSSLPPSSAIQISPA---LRSPSVSRNHSLSSTPYLHQSLISSYHQSPRSSY 358

Query: 314  SNSPALSQSRSSVDLRNASSQRSYASQLVASQSLGYPSLSPLNSRYISPYLPSSSNASPS 135
              SP+LS SRSSV+LRNASSQRSY S L++  S  YPS+SPL+SRY+ P++PS SNASPS
Sbjct: 359  HQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYMIPHIPSPSNASPS 418

Query: 134  YVGSSSRQPYLLHCSESATSFSPFASAQSLP 42
             +GSSS Q   LHCS SA S SPFAS +SLP
Sbjct: 419  IIGSSSHQHNPLHCSGSAASLSPFASTRSLP 449


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