BLASTX nr result

ID: Coptis21_contig00002339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002339
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27668.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002277156.1| PREDICTED: stress-associated endoplasmic ret...    92   8e-17
gb|AFK48951.1| unknown [Lotus japonicus]                               91   2e-16
gb|ADB02897.1| membrane protein [Jatropha curcas]                      89   7e-16
ref|XP_002514902.1| stress associated endoplasmic reticulum prot...    89   9e-16

>emb|CBI27668.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 57/103 (55%), Positives = 65/103 (63%), Gaps = 12/103 (11%)
 Frame = -1

Query: 548 LFSGQPKKKKNRSSADLLPS------------SPTMTTSRRLADRKVEKFEKNITKRGAV 405
           LF G+ K+K+ R S +  P+            +  MTTSRRLADRKVEKFEKNITKRG+V
Sbjct: 376 LFFGR-KRKRERESPENSPTILCFDIFRPPDLTVNMTTSRRLADRKVEKFEKNITKRGSV 434

Query: 404 PETTAKKGADYPVTPXXXXXXXXXXXXXXXFQIIRTATSGGVA 276
           PETT KKG+DYPV P               FQIIRTATSGGVA
Sbjct: 435 PETTTKKGSDYPVGPVLLGFFVFVVIGSSLFQIIRTATSGGVA 477


>ref|XP_002277156.1| PREDICTED: stress-associated endoplasmic reticulum protein 2-like
           [Vitis vinifera]
          Length = 68

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 49/68 (72%), Positives = 51/68 (75%)
 Frame = -1

Query: 479 MTTSRRLADRKVEKFEKNITKRGAVPETTAKKGADYPVTPXXXXXXXXXXXXXXXFQIIR 300
           MTTSRRLADRKVEKFEKNITKRG+VPETT KKG+DYPV P               FQIIR
Sbjct: 1   MTTSRRLADRKVEKFEKNITKRGSVPETTTKKGSDYPVGPVLLGFFVFVVIGSSLFQIIR 60

Query: 299 TATSGGVA 276
           TATSGGVA
Sbjct: 61  TATSGGVA 68


>gb|AFK48951.1| unknown [Lotus japonicus]
          Length = 68

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 49/68 (72%), Positives = 50/68 (73%)
 Frame = -1

Query: 479 MTTSRRLADRKVEKFEKNITKRGAVPETTAKKGADYPVTPXXXXXXXXXXXXXXXFQIIR 300
           MTTSRRLADRKVEKFEKNITKRG VPETTAKKG DYPV P               FQIIR
Sbjct: 1   MTTSRRLADRKVEKFEKNITKRGFVPETTAKKGKDYPVGPVLLGFFVFVVIGSSLFQIIR 60

Query: 299 TATSGGVA 276
           TATSGG+A
Sbjct: 61  TATSGGLA 68


>gb|ADB02897.1| membrane protein [Jatropha curcas]
          Length = 68

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 48/68 (70%), Positives = 49/68 (72%)
 Frame = -1

Query: 479 MTTSRRLADRKVEKFEKNITKRGAVPETTAKKGADYPVTPXXXXXXXXXXXXXXXFQIIR 300
           MTTSRRLADRKVEKFEKNITKRGAVPETT KK  DYPV P               FQIIR
Sbjct: 1   MTTSRRLADRKVEKFEKNITKRGAVPETTTKKAKDYPVGPVLLGFFIFVVIGSSLFQIIR 60

Query: 299 TATSGGVA 276
           TATSGG+A
Sbjct: 61  TATSGGMA 68


>ref|XP_002514902.1| stress associated endoplasmic reticulum protein, putative [Ricinus
           communis] gi|223545953|gb|EEF47456.1| stress associated
           endoplasmic reticulum protein, putative [Ricinus
           communis]
          Length = 68

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 47/68 (69%), Positives = 49/68 (72%)
 Frame = -1

Query: 479 MTTSRRLADRKVEKFEKNITKRGAVPETTAKKGADYPVTPXXXXXXXXXXXXXXXFQIIR 300
           MTTSRRLADRKVE+FEKNITKRG VPETT KKG DYPV P               FQIIR
Sbjct: 1   MTTSRRLADRKVERFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 299 TATSGGVA 276
           TATSGG+A
Sbjct: 61  TATSGGMA 68


Top