BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002335
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   330   3e-88
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   294   2e-77
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   288   1e-75
gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK3484...   283   3e-74
ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 ...   283   4e-74

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  330 bits (845), Expect = 3e-88
 Identities = 162/231 (70%), Positives = 179/231 (77%), Gaps = 7/231 (3%)
 Frame = -1

Query: 840 MASGFEESMNKXXXXXXXXXXXXXXXXXXSFECNICFELAQDPIVTLCGHLFCWPCLYKW 661
           M SGF ES ++                  +FECNICF+LAQDPIVTLCGHLFCWPCLYKW
Sbjct: 1   MTSGFGESTSRPPQSPSFSSNNGSNSDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 60

Query: 660 LHIHSHSQECPVCKAVIQEEKLVPLYGRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPP 481
           LHIHSHSQECPVCKA+++EEKLVPLYGRGKT TDPRSKSIPG+NIPNRP+GQRPETAPPP
Sbjct: 61  LHIHSHSQECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPP 120

Query: 480 DQNXXXXXXXXXXXGI---APMATARIGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGA 313
           D N           G+   APMATAR GNFTLSAAFGGLFPS+FNLQVHGFPD TMYG A
Sbjct: 121 DANHFMQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPA 180

Query: 312 AGYPYGFTNSFHGAHAPFFPQ-PANQGQQTDY--KMLFLMVGIIFIIAMCY 169
           AG+PYGF+NSFHG HA  FPQ P  QGQQ DY  KMLFLM+G+  IIA+ +
Sbjct: 181 AGFPYGFSNSFHGGHAHGFPQHPPTQGQQADYYLKMLFLMIGVFVIIALIW 231


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  294 bits (753), Expect = 2e-77
 Identities = 140/199 (70%), Positives = 157/199 (78%), Gaps = 5/199 (2%)
 Frame = -1

Query: 750 FECNICFELAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKAVIQEEKLVPLYGRGK 571
           FECNICF+LAQDPIVTLCGHLFCWPCLYKWLH HS S+ECPVCKA+++EEKLVPLYGRGK
Sbjct: 30  FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSQSKECPVCKALVEEEKLVPLYGRGK 89

Query: 570 TPTDPRSKSIPGVNIPNRPSGQRPETAPPPDQNXXXXXXXXXXXGI---APMATARIGNF 400
           T TDPRSKSIPGVNIPNRP+GQRPETAPPP+ N           G+   APMATAR GNF
Sbjct: 90  TSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFAQHGFGFMGGLGGFAPMATARFGNF 149

Query: 399 TLSAAFGGLFPSIFNLQVHGFPD-TMYGGAAGYPYGFTNSFHGAHAPFFPQPANQGQQTD 223
           TLSAAFGGL PS+FNLQVHGFPD  MYG A G+PYGF+NSFHG HA  + Q   QGQQ  
Sbjct: 150 TLSAAFGGLIPSLFNLQVHGFPDAAMYGTATGFPYGFSNSFHGGHAHGYHQHQGQGQQDY 209

Query: 222 Y-KMLFLMVGIIFIIAMCY 169
           Y K L   +G   ++A+ +
Sbjct: 210 YLKRLLFFIGFCVLLALIW 228


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  288 bits (737), Expect = 1e-75
 Identities = 145/228 (63%), Positives = 162/228 (71%), Gaps = 4/228 (1%)
 Frame = -1

Query: 840 MASGFEESMNKXXXXXXXXXXXXXXXXXXSFECNICFELAQDPIVTLCGHLFCWPCLYKW 661
           MASGF ES ++                   FECNICF+LAQDPIVTLCGHLFCWPCLYKW
Sbjct: 1   MASGFGESTSRAPHNSSFTSNNGNGDAGN-FECNICFDLAQDPIVTLCGHLFCWPCLYKW 59

Query: 660 LHIHSHSQECPVCKAVIQEEKLVPLYGRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPP 481
           LH HS S+ECPVCKA+++EEKLVPLYGRGKT TDPRSKSIPGVNIPNRP+GQRPETAPPP
Sbjct: 60  LHFHSKSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPP 119

Query: 480 DQNXXXXXXXXXXXGI---APMATARIGNFTLSAAFGGLFPSIFNLQVHGFPDTMYGGAA 310
           + N           G+   APMATAR+GNFT SAAFGGL PS+FNLQVHGFPD    G A
Sbjct: 120 EPNHFGQHGFGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVHGFPDAAMYGPA 179

Query: 309 GYPYGFTNSFHGAHAPFFPQPANQGQQTDY-KMLFLMVGIIFIIAMCY 169
           GYPYGF NSFHG H   + Q   QGQQ  Y K L L +G    +A+ +
Sbjct: 180 GYPYGF-NSFHGGHPHGYRQHHGQGQQDYYLKRLLLFIGFCVFLALIW 226


>gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK34841.1| unknown
           [Lotus japonicus]
          Length = 228

 Score =  283 bits (725), Expect = 3e-74
 Identities = 138/229 (60%), Positives = 164/229 (71%), Gaps = 4/229 (1%)
 Frame = -1

Query: 840 MASGFEESMNKXXXXXXXXXXXXXXXXXXSFECNICFELAQDPIVTLCGHLFCWPCLYKW 661
           MASGF ES ++                   FECNICF+LAQDPI+TLCGHLFCWPCLYKW
Sbjct: 1   MASGFGESTSRSPPSPSYAGNNNSDAGN--FECNICFDLAQDPIITLCGHLFCWPCLYKW 58

Query: 660 LHIHSHSQECPVCKAVIQEEKLVPLYGRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPP 481
           LH HS S+ECPVCKA+++EEKLVPLYGRGKT +DPRS+SIPGVNIP+RP+GQRPETAPPP
Sbjct: 59  LHFHSQSRECPVCKALVEEEKLVPLYGRGKTSSDPRSRSIPGVNIPHRPAGQRPETAPPP 118

Query: 480 DQNXXXXXXXXXXXGI---APMATARIGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGA 313
           + N           G+   AP ATAR GNFTLSAAFGG  PS+FN Q+HGF   TMYGGA
Sbjct: 119 EPNPFAHHGFGFTGGLGGFAPAATARFGNFTLSAAFGGFIPSLFNFQLHGFHGATMYGGA 178

Query: 312 AGYPYGFTNSFHGAHAPFFPQPANQGQQTDYKMLFLMVGIIFIIAMCYL 166
            G+PYGF+NSFHG H   +P    QGQQ DY +  L+  +IF + + ++
Sbjct: 179 PGFPYGFSNSFHGGHVHRYPLHTGQGQQ-DYYLKRLLFFVIFCVVLAFI 226


>ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 1 [Glycine max]
           gi|356519064|ref|XP_003528194.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1 isoform 2 [Glycine max]
          Length = 231

 Score =  283 bits (724), Expect = 4e-74
 Identities = 137/231 (59%), Positives = 163/231 (70%), Gaps = 6/231 (2%)
 Frame = -1

Query: 840 MASGFEESMNKXXXXXXXXXXXXXXXXXXSFECNICFELAQDPIVTLCGHLFCWPCLYKW 661
           MASGF ES  +                   FECNICFELAQDPI+TLCGHLFCWPCLYKW
Sbjct: 1   MASGFGESTGRSPPSPSYFNNNNNSDAAN-FECNICFELAQDPIITLCGHLFCWPCLYKW 59

Query: 660 LHIHSHSQECPVCKAVIQEEKLVPLYGRGKTPTDPRSKSIPGVNIPNRPSGQRPETAPPP 481
           LH HS S+ECPVCKA+++EEKLVPLYGRGK+ TDPRSKSIPGVNIP+RP+GQRPETAPPP
Sbjct: 60  LHFHSQSRECPVCKALVEEEKLVPLYGRGKSSTDPRSKSIPGVNIPHRPAGQRPETAPPP 119

Query: 480 DQNXXXXXXXXXXXGIA-----PMATARIGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYG 319
           + N           G+      PMAT R GNF LSAAFGG  PS+FN Q+HGF D  MYG
Sbjct: 120 ETNHFHQHGFGFMGGLGGFVPPPMATTRFGNFALSAAFGGFIPSLFNFQMHGFHDAAMYG 179

Query: 318 GAAGYPYGFTNSFHGAHAPFFPQPANQGQQTDYKMLFLMVGIIFIIAMCYL 166
           G AG+P+GF N+FHG HA  FP   +QGQQ DY +  L++ ++F + + ++
Sbjct: 180 GGAGFPHGFANTFHGVHAHGFPLRTHQGQQ-DYYLKKLLLFVVFCVVLAFI 229