BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002334
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28691.3| unnamed protein product [Vitis vinifera]              100   2e-19
emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]    96   4e-18
ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloro...    93   2e-17
ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]       89   3e-16

>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/108 (50%), Positives = 68/108 (62%)
 Frame = -3

Query: 326 YKRGASKSNCFPISKNAYTWSSASNYVRLTVGATQFSNKPFVTEPLVHKRRGIWKCATXX 147
           Y RG     C      A+T  SA+NYVRL  GA ++S K FV +    KR GI++CAT  
Sbjct: 26  YCRGPGYEKCHLNIGIAFTLRSAANYVRLGDGAREYSGKLFVAKRNFQKRTGIFRCATIE 85

Query: 146 XXXXXXXXXXKDAKTRMEKTIESVREHFNAVRTGRANPSMLDRVEIEY 3
                     KD K RMEKTIE+VR +FN++RTGRANP++LDRVE+EY
Sbjct: 86  EIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEY 133


>emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]
          Length = 222

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/108 (48%), Positives = 66/108 (61%)
 Frame = -3

Query: 326 YKRGASKSNCFPISKNAYTWSSASNYVRLTVGATQFSNKPFVTEPLVHKRRGIWKCATXX 147
           Y RG     C      A+T  SA+NY RL  GA ++S K  V +    KR GI++CAT  
Sbjct: 26  YCRGPGYEKCHLNIGIAFTLRSAANYXRLGDGAREYSGKLIVAKRNFQKRTGIFRCATIE 85

Query: 146 XXXXXXXXXXKDAKTRMEKTIESVREHFNAVRTGRANPSMLDRVEIEY 3
                     KD K RMEKTIE+VR +FN++RTGRANP++LDRVE+EY
Sbjct: 86  EIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEY 133


>ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Vitis
           vinifera]
          Length = 280

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 54/116 (46%), Positives = 69/116 (59%), Gaps = 8/116 (6%)
 Frame = -3

Query: 326 YKRGASKSNCFPISKNAYTWSSASNYVRLTVGATQFSNKPFVTEPLVHKRR--------G 171
           Y RG     C      A+T  SA+NYVRL  GA ++S K FV +    KR+        G
Sbjct: 24  YCRGPGYEKCHLNIGIAFTLRSAANYVRLGDGAREYSGKLFVAKRNFQKRQVESYGYKTG 83

Query: 170 IWKCATXXXXXXXXXXXXKDAKTRMEKTIESVREHFNAVRTGRANPSMLDRVEIEY 3
           I++CAT            KD K RMEKTIE+VR +FN++RTGRANP++LDRVE+EY
Sbjct: 84  IFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEY 139


>ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|222843838|gb|EEE81385.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/89 (49%), Positives = 60/89 (67%)
 Frame = -3

Query: 269 WSSASNYVRLTVGATQFSNKPFVTEPLVHKRRGIWKCATXXXXXXXXXXXXKDAKTRMEK 90
           WSS++NY  L  G+T+ S KP   + L+  RRG+ + AT             DAK RMEK
Sbjct: 57  WSSSANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEK 116

Query: 89  TIESVREHFNAVRTGRANPSMLDRVEIEY 3
           TI+++R +FN+VRTGRANPSMLD++E+EY
Sbjct: 117 TIDTMRANFNSVRTGRANPSMLDKIEVEY 145


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/89 (48%), Positives = 60/89 (67%)
 Frame = -3

Query: 269 WSSASNYVRLTVGATQFSNKPFVTEPLVHKRRGIWKCATXXXXXXXXXXXXKDAKTRMEK 90
           WSS++NY  L  G+++ S KP   + L+  RRG+ + AT             DAK RMEK
Sbjct: 57  WSSSANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEK 116

Query: 89  TIESVREHFNAVRTGRANPSMLDRVEIEY 3
           TI+++R +FN+VRTGRANPSMLD++E+EY
Sbjct: 117 TIDTMRTNFNSVRTGRANPSMLDKIEVEY 145