BLASTX nr result

ID: Coptis21_contig00002330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002330
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278569.1| PREDICTED: casparian strip membrane protein ...   102   4e-20
sp|P0DI44.1|CASP_SOLTU RecName: Full=Casparian strip membrane pr...    93   3e-17
ref|XP_002318369.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|NP_001236648.1| CASP-like protein 1 [Glycine max] gi|2885591...    89   3e-16
ref|XP_002436759.1| hypothetical protein SORBIDRAFT_10g008220 [S...    88   6e-16

>ref|XP_002278569.1| PREDICTED: casparian strip membrane protein VIT_14s0108g01050
           [Vitis vinifera] gi|226713606|sp|A7PMY7.1|CASP3_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_14s0108g01050 gi|296082941|emb|CBI22242.3| unnamed
           protein product [Vitis vinifera]
          Length = 186

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/68 (73%), Positives = 59/68 (86%)
 Frame = -1

Query: 205 AGAMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIR 26
           AGA+ELGE SK S  R G+N+G SILDFILRL  ++GTLGSAIAMGTT+ETLPFFTQF +
Sbjct: 3   AGALELGEGSKTSIPRGGVNRGISILDFILRLITIIGTLGSAIAMGTTNETLPFFTQFTQ 62

Query: 25  FKAEYNDL 2
           F+AEY+DL
Sbjct: 63  FRAEYDDL 70


>sp|P0DI44.1|CASP_SOLTU RecName: Full=Casparian strip membrane protein 1
          Length = 188

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/68 (66%), Positives = 58/68 (85%)
 Frame = -1

Query: 205 AGAMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIR 26
           AGA+ELG ASK +  + G+N+G SILD  +R+ A++ TLGSAIAMGTT+ETLPFFTQF+R
Sbjct: 3   AGALELGHASKTT--KSGVNRGMSILDLFIRIIAIIATLGSAIAMGTTNETLPFFTQFVR 60

Query: 25  FKAEYNDL 2
           FKA+Y+DL
Sbjct: 61  FKAKYSDL 68


>ref|XP_002318369.1| predicted protein [Populus trichocarpa]
           gi|238055373|sp|B9I534.1|CASP1_POPTR RecName:
           Full=Casparian strip membrane protein POPTRDRAFT_569472
           gi|222859042|gb|EEE96589.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = -1

Query: 205 AGAMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIR 26
           AG +ELGE  K S+ +  +N+G +ILDFILR+ A +GTLGSAI+M TT+ETLPFFTQFIR
Sbjct: 3   AGPIELGEG-KSSAPKAAVNRGVAILDFILRILAFIGTLGSAISMATTNETLPFFTQFIR 61

Query: 25  FKAEYNDL 2
           F+AEY+DL
Sbjct: 62  FRAEYDDL 69


>ref|NP_001236648.1| CASP-like protein 1 [Glycine max]
           gi|288559151|sp|C6T1G0.1|CSPL1_SOYBN RecName:
           Full=CASP-like protein 1 gi|255630091|gb|ACU15399.1|
           unknown [Glycine max]
          Length = 186

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/67 (64%), Positives = 57/67 (85%)
 Frame = -1

Query: 202 GAMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIRF 23
           G++E GE SK +S R+G+ +G SI+DFILR+ A V TLGSA+AMGTT+ETLPF TQFI+F
Sbjct: 4   GSIEAGEVSKDASPRKGVARGLSIMDFILRIIAAVATLGSALAMGTTNETLPFATQFIKF 63

Query: 22  KAEYNDL 2
           +AE++DL
Sbjct: 64  RAEFDDL 70


>ref|XP_002436759.1| hypothetical protein SORBIDRAFT_10g008220 [Sorghum bicolor]
           gi|288558954|sp|C5Z7E3.1|CASP2_SORBI RecName:
           Full=Casparian strip membrane protein Sb10g008220
           gi|241914982|gb|EER88126.1| hypothetical protein
           SORBIDRAFT_10g008220 [Sorghum bicolor]
          Length = 186

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/68 (66%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
 Frame = -1

Query: 202 GAMELGEASKVSS-HRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIR 26
           G+ E GE SK +   R G++KG S+LD ILR  A++GTL SAIAMGTT+ETLPFFTQFIR
Sbjct: 3   GSSEHGETSKAAPLGRGGVSKGVSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFIR 62

Query: 25  FKAEYNDL 2
           FKA+Y+DL
Sbjct: 63  FKAQYSDL 70


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