BLASTX nr result

ID: Coptis21_contig00002309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002309
         (2063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein lig...   681   0.0  
ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein lig...   671   0.0  
emb|CBI16150.3| unnamed protein product [Vitis vinifera]              648   0.0  
ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|2...   641   0.0  
gb|AEW69785.1| Hop-interacting protein THI012 [Solanum lycopersi...   638   e-180

>ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 1
            [Vitis vinifera]
          Length = 445

 Score =  681 bits (1757), Expect = 0.0
 Identities = 335/444 (75%), Positives = 379/444 (85%), Gaps = 4/444 (0%)
 Frame = +3

Query: 204  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHTTVYDRLSALHLAAINDQIE 383
            MGQGLSC  S EH    AV++GDLE+VE+ L RDPS+L  TTVYDR SALH+AA N QIE
Sbjct: 1    MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60

Query: 384  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 563
            +LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61   ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120

Query: 564  AYYGHSDCLKAILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 743
            AYYGHSDCL+AILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121  AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180

Query: 744  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 923
            GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181  GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240

Query: 924  GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1103
            GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241  GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300

Query: 1104 PAYSD-EVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1280
            P++SD  VDD  SE S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 301  PSHSDVAVDDNISEASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTAC 360

Query: 1281 MPTPICPFCRSIIVRLVVAKLKSDKEVDM---DINSSKQRKMRKSMNHCEGSSSFKSLSA 1451
            +  P+CPFCRS I RL VAK+K++ E D    D++SSK R+ RKS N  EGSSSFK LSA
Sbjct: 361  LTAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKSRNLSEGSSSFKGLSA 420

Query: 1452 VXXXXXXXXXXXXXIAADSNDWAD 1523
            V             IAA+ N+W D
Sbjct: 421  VGSFSKMGGRGSGRIAAE-NEWID 443


>ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 2
            [Vitis vinifera]
          Length = 438

 Score =  671 bits (1731), Expect = 0.0
 Identities = 330/443 (74%), Positives = 374/443 (84%), Gaps = 3/443 (0%)
 Frame = +3

Query: 204  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHTTVYDRLSALHLAAINDQIE 383
            MGQGLSC  S EH    AV++GDLE+VE+ L RDPS+L  TTVYDR SALH+AA N QIE
Sbjct: 1    MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60

Query: 384  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 563
            +LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61   ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120

Query: 564  AYYGHSDCLKAILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 743
            AYYGHSDCL+AILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121  AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180

Query: 744  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 923
            GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181  GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240

Query: 924  GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1103
            GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241  GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300

Query: 1104 PAYSDEVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTACM 1283
            P++SD         S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC+
Sbjct: 301  PSHSDVA------ASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTACL 354

Query: 1284 PTPICPFCRSIIVRLVVAKLKSDKEVDM---DINSSKQRKMRKSMNHCEGSSSFKSLSAV 1454
              P+CPFCRS I RL VAK+K++ E D    D++SSK R+ RKS N  EGSSSFK LSAV
Sbjct: 355  TAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKSRNLSEGSSSFKGLSAV 414

Query: 1455 XXXXXXXXXXXXXIAADSNDWAD 1523
                         IAA+ N+W D
Sbjct: 415  GSFSKMGGRGSGRIAAE-NEWID 436


>emb|CBI16150.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  648 bits (1672), Expect = 0.0
 Identities = 310/390 (79%), Positives = 349/390 (89%), Gaps = 1/390 (0%)
 Frame = +3

Query: 204  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHTTVYDRLSALHLAAINDQIE 383
            MGQGLSC  S EH    AV++GDLE+VE+ L RDPS+L  TTVYDR SALH+AA N QIE
Sbjct: 1    MGQGLSCGVSHEHGLFSAVQVGDLESVESLLARDPSLLHQTTVYDRHSALHIAAANGQIE 60

Query: 384  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 563
            +LS ILDR+++PD+LNR+KQTPLMLA MHGKI+CVQKLL+AGAN+LMFDS++GRTCLHYA
Sbjct: 61   ILSMILDRSISPDLLNRNKQTPLMLAAMHGKISCVQKLLQAGANVLMFDSMHGRTCLHYA 120

Query: 564  AYYGHSDCLKAILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 743
            AYYGHSDCL+AILSAAHS+PV++SWGF RFVNIRDG GATPLHLAARQRRPDCVHILLD+
Sbjct: 121  AYYGHSDCLQAILSAAHSNPVADSWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLDN 180

Query: 744  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 923
            GALVCASTGGYG PGSTPLHLAARGGSLDCIRELLAWGADRL RD+SG IPY+VALKHKH
Sbjct: 181  GALVCASTGGYGCPGSTPLHLAARGGSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKH 240

Query: 924  GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1103
            GACAALLNPTSAEP+VWPSPLKFISELN +AK LLE+ALMEAN+EREK ILK TS+SL S
Sbjct: 241  GACAALLNPTSAEPLVWPSPLKFISELNQDAKALLEQALMEANREREKSILKGTSYSLPS 300

Query: 1104 PAYSD-EVDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1280
            P++SD  VDD  SE S+TELC ICFDQVCTIEVQ+CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 301  PSHSDVAVDDNISEASETELCCICFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTAC 360

Query: 1281 MPTPICPFCRSIIVRLVVAKLKSDKEVDMD 1370
            +  P+CPFCRS I RL VAK+K++ E D D
Sbjct: 361  LTAPVCPFCRSGIARLAVAKIKTNNEADSD 390


>ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|222847136|gb|EEE84683.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  641 bits (1653), Expect = 0.0
 Identities = 316/444 (71%), Positives = 365/444 (82%), Gaps = 4/444 (0%)
 Frame = +3

Query: 204  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHTTVYDRLSALHLAAINDQIE 383
            MGQGLSC +S +H F  AV  GDL+ V A LERDPS+L  TT YDR   LH+AA N QIE
Sbjct: 1    MGQGLSCAASQDHRFFSAVHFGDLDTVNAMLERDPSLLYQTT-YDRQYPLHIAAANGQIE 59

Query: 384  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 563
            +LS +L+R+V+PD++NR KQTPLMLA MHGKI+CV+KL+EAGAN+L FDS+NGRTCLH+A
Sbjct: 60   ILSMLLERSVDPDMVNRQKQTPLMLAAMHGKISCVKKLVEAGANMLKFDSLNGRTCLHFA 119

Query: 564  AYYGHSDCLKAILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 743
            AYYGHSDCL+AILSA  SSPV+ SWG+TRFVNIRDG GATPLHLAARQRRP+CVHILLD+
Sbjct: 120  AYYGHSDCLQAILSAVQSSPVAVSWGYTRFVNIRDGRGATPLHLAARQRRPECVHILLDN 179

Query: 744  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 923
            GALVC+STGGYG PG+TPLHLAARGGSLDCIRELLAWGADR+ RDASG IPY+VALK+++
Sbjct: 180  GALVCSSTGGYGSPGTTPLHLAARGGSLDCIRELLAWGADRMQRDASGRIPYVVALKYRN 239

Query: 924  GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1103
            G CAALLNP+SAEP+VWPSPLKFISELN EAK LLE ALMEAN+EREK ILK T +SL S
Sbjct: 240  GTCAALLNPSSAEPLVWPSPLKFISELNQEAKALLECALMEANREREKNILKGTGYSLPS 299

Query: 1104 PAYSDE-VDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1280
            P++SD+  DD  SE SDTELC ICF+QVCTIEV++CGHQMCA CTL+LCCHNKPNPTTAC
Sbjct: 300  PSHSDDGTDDNISEASDTELCCICFEQVCTIEVEDCGHQMCAQCTLALCCHNKPNPTTAC 359

Query: 1281 MPTPICPFCRSIIVRLVVAKLKSDKEVDMDI---NSSKQRKMRKSMNHCEGSSSFKSLSA 1451
            +  P+CPFCRS I RLVVAK+K   + D DI    S K RK R+S+N  EGSSSFK LSA
Sbjct: 360  LTPPVCPFCRSTIARLVVAKMKDCNDADQDIGDVGSPKLRKSRRSLNFSEGSSSFKGLSA 419

Query: 1452 VXXXXXXXXXXXXXIAADSNDWAD 1523
                          IAA+ N+W D
Sbjct: 420  T--FGKMGGRGSGRIAAE-NEWVD 440


>gb|AEW69785.1| Hop-interacting protein THI012 [Solanum lycopersicum]
          Length = 446

 Score =  638 bits (1646), Expect = e-180
 Identities = 306/441 (69%), Positives = 364/441 (82%), Gaps = 1/441 (0%)
 Frame = +3

Query: 204  MGQGLSCTSSSEHEFLKAVELGDLEAVEAALERDPSVLIHTTVYDRLSALHLAAINDQIE 383
            MGQGLSC +S EH    AV+ GDL+ +++ L+++PS++ H+TVYDR S LH+AA N QIE
Sbjct: 1    MGQGLSCGTSDEHGLFSAVQCGDLDTLKSVLDKNPSLIHHSTVYDRQSPLHIAAANGQIE 60

Query: 384  VLSFILDRNVNPDILNRHKQTPLMLAVMHGKITCVQKLLEAGANILMFDSINGRTCLHYA 563
            +++ +L++++NPD+LNR+KQTPLMLA MHGKI+CV+KL+EAGANIL FDS+NGRTCLHYA
Sbjct: 61   IVTMLLNKSINPDLLNRYKQTPLMLAAMHGKISCVEKLIEAGANILKFDSLNGRTCLHYA 120

Query: 564  AYYGHSDCLKAILSAAHSSPVSESWGFTRFVNIRDGNGATPLHLAARQRRPDCVHILLDS 743
            AYYGH + LKAILS A +S V+ SWG+ RFVN+RDG GATPLHLAARQRRP+CVHILLD+
Sbjct: 121  AYYGHFESLKAILSTARTSHVAASWGYARFVNVRDGKGATPLHLAARQRRPECVHILLDN 180

Query: 744  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLYRDASGYIPYMVALKHKH 923
            GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRL+RD++G IPY VAL++ H
Sbjct: 181  GALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLHRDSTGRIPYTVALRYHH 240

Query: 924  GACAALLNPTSAEPIVWPSPLKFISELNPEAKVLLERALMEANKEREKKILKETSFSLAS 1103
            GACAALLNP+SAEP+VWPSPLKFIS+LN EAK LLERALMEANKEREK ILK T +S  S
Sbjct: 241  GACAALLNPSSAEPLVWPSPLKFISQLNDEAKALLERALMEANKEREKNILKGTDYSPPS 300

Query: 1104 PAYSDE-VDDISSEGSDTELCSICFDQVCTIEVQNCGHQMCAHCTLSLCCHNKPNPTTAC 1280
            P+ SD  +DD  SE SDTE+C ICFDQ+CTIEVQ+CGHQMCAHC L+LCCHNKPNPTT  
Sbjct: 301  PSQSDAGMDDNMSEVSDTEVCCICFDQLCTIEVQDCGHQMCAHCVLALCCHNKPNPTTTS 360

Query: 1281 MPTPICPFCRSIIVRLVVAKLKSDKEVDMDINSSKQRKMRKSMNHCEGSSSFKSLSAVXX 1460
             P P+CPFCRS IV+L   K+  + + D D++SSK RK R+S N  EGSSSFK LSAV  
Sbjct: 361  PPEPVCPFCRSNIVQLQAIKVTKNNDTDSDLHSSKLRKTRRSRNFSEGSSSFKGLSAVSS 420

Query: 1461 XXXXXXXXXXXIAADSNDWAD 1523
                       IAAD N+W D
Sbjct: 421  FGKMTGRGSGRIAAD-NEWID 440


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