BLASTX nr result

ID: Coptis21_contig00002302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002302
         (1788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A,...   452   e-124
ref|XP_002310373.1| predicted protein [Populus trichocarpa] gi|2...   442   e-121
gb|ABK95225.1| unknown [Populus trichocarpa]                          442   e-121
emb|CBI24768.3| unnamed protein product [Vitis vinifera]              437   e-120
ref|XP_002280489.1| PREDICTED: uncharacterized protein LOC100266...   436   e-119

>ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A, putative [Ricinus
            communis] gi|223526810|gb|EEF29030.1| Late embryogenesis
            abundant protein Lea14-A, putative [Ricinus communis]
          Length = 313

 Score =  452 bits (1163), Expect = e-124
 Identities = 217/279 (77%), Positives = 247/279 (88%)
 Frame = +2

Query: 458  GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVXXXXXXXXXX 637
            GGFIDKVKDFI +IGEKIEEA+GFGKPTADVTG+HIPSI L+KADIVVDV          
Sbjct: 25   GGFIDKVKDFIHDIGEKIEEAIGFGKPTADVTGVHIPSINLEKADIVVDVLIKNPNPVPI 84

Query: 638  XXXXXXXXVESAGRKLVSGLIPDAGTIRAHGSETVKIPITLLYDDIKNTYDDIKPGSIIP 817
                    +ES GRKL+SGLIPDAGTIRAHG ETVKIP+TL+YDDIKNTYDDI+PGSIIP
Sbjct: 85   PLVDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPVTLIYDDIKNTYDDIQPGSIIP 144

Query: 818  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 997
            Y+IKV+LI+DVP+FGRLTLPLEKTGEIPIPYKPD+D+EKI F++FSFEETVA+LH+KLEN
Sbjct: 145  YRIKVDLIIDVPVFGRLTLPLEKTGEIPIPYKPDIDLEKIHFERFSFEETVAVLHVKLEN 204

Query: 998  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 1177
            MNDFDLGLN L  E+WLS VSIGGA+L ES+KI+K GISYID+PITFRPKD GSA+WDMI
Sbjct: 205  MNDFDLGLNGLDYEVWLSDVSIGGAELAESTKIEKKGISYIDIPITFRPKDFGSALWDMI 264

Query: 1178 RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 1294
            RG+GTGY++KG I+VDTPFGAMKLPISKEGGTT +KKNK
Sbjct: 265  RGKGTGYTMKGHINVDTPFGAMKLPISKEGGTTRLKKNK 303


>ref|XP_002310373.1| predicted protein [Populus trichocarpa] gi|222853276|gb|EEE90823.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  442 bits (1138), Expect = e-121
 Identities = 213/279 (76%), Positives = 244/279 (87%)
 Frame = +2

Query: 458  GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVXXXXXXXXXX 637
            GGFIDKVKDFIQ+IGEKIE A+GFGKPTADVT IH P+I L+KA+IVVDV          
Sbjct: 24   GGFIDKVKDFIQDIGEKIEGAIGFGKPTADVTEIHFPTINLEKAEIVVDVLIKNPNPVPI 83

Query: 638  XXXXXXXXVESAGRKLVSGLIPDAGTIRAHGSETVKIPITLLYDDIKNTYDDIKPGSIIP 817
                    +ES GRKL+SGLIPDAGTIRAHG ETVKIPI L+YDDIKNTYDDIKPGSIIP
Sbjct: 84   PLIDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPIHLVYDDIKNTYDDIKPGSIIP 143

Query: 818  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 997
            Y+IKV+ IVDVPIFGRLTLPLEKTGEIP+PYKPD+D+EKI F++FSFEETVA+LHLKLEN
Sbjct: 144  YRIKVDFIVDVPIFGRLTLPLEKTGEIPVPYKPDIDIEKIKFERFSFEETVAVLHLKLEN 203

Query: 998  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 1177
             NDFDLGLN+L  E+WLS VSIGGA+L ES+K+DKNGI+Y+D+PITF+PKD GSA+WDMI
Sbjct: 204  KNDFDLGLNSLDYEVWLSNVSIGGAELAESTKLDKNGINYVDIPITFKPKDFGSALWDMI 263

Query: 1178 RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 1294
            RG+GTGYS+KG I+VDTPFGAMKLPISKEGGTT +KK+K
Sbjct: 264  RGKGTGYSMKGHINVDTPFGAMKLPISKEGGTTRLKKSK 302


>gb|ABK95225.1| unknown [Populus trichocarpa]
          Length = 314

 Score =  442 bits (1138), Expect = e-121
 Identities = 213/279 (76%), Positives = 244/279 (87%)
 Frame = +2

Query: 458  GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVXXXXXXXXXX 637
            GGFIDKVKDFIQ+IGEKIE A+GFGKPTADVT IH P+I L+KA+IVVDV          
Sbjct: 24   GGFIDKVKDFIQDIGEKIEGAIGFGKPTADVTEIHFPTINLEKAEIVVDVLIKNPNPVPI 83

Query: 638  XXXXXXXXVESAGRKLVSGLIPDAGTIRAHGSETVKIPITLLYDDIKNTYDDIKPGSIIP 817
                    +ES GRKL+SGLIPDAGTIRAHG ETVKIPI L+YDDIKNTYDDIKPGSIIP
Sbjct: 84   PLIDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPIHLVYDDIKNTYDDIKPGSIIP 143

Query: 818  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 997
            Y+IKV+ IVDVPIFGRLTLPLEKTGEIP+PYKPD+D+EKI F++FSFEETVA+LHLKLEN
Sbjct: 144  YRIKVDFIVDVPIFGRLTLPLEKTGEIPVPYKPDIDIEKIKFERFSFEETVAVLHLKLEN 203

Query: 998  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 1177
             NDFDLGLN+L  E+WLS VSIGGA+L ES+K+DKNGI+Y+D+PITF+PKD GSA+WDMI
Sbjct: 204  KNDFDLGLNSLDYEVWLSNVSIGGAELAESTKLDKNGINYVDIPITFKPKDFGSALWDMI 263

Query: 1178 RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 1294
            RG+GTGYS+KG I+VDTPFGAMKLPISKEGGTT +KK+K
Sbjct: 264  RGKGTGYSMKGHINVDTPFGAMKLPISKEGGTTRLKKSK 302


>emb|CBI24768.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  437 bits (1123), Expect = e-120
 Identities = 215/308 (69%), Positives = 252/308 (81%)
 Frame = +2

Query: 371  GMSSSENPQXXXXXXXXXXXXXXXXXXXXGGFIDKVKDFIQNIGEKIEEAVGFGKPTADV 550
            GMSSS+ P+                    GGFI+KVKDFI +IGEKIEEA+GFGKPTADV
Sbjct: 85   GMSSSDKPEEVVERDAKEKDDKNEEK---GGFIEKVKDFIHDIGEKIEEAIGFGKPTADV 141

Query: 551  TGIHIPSITLKKADIVVDVXXXXXXXXXXXXXXXXXXVESAGRKLVSGLIPDAGTIRAHG 730
            TGIHIP I L++ADIV+DV                  +ES GRKLVSGLIPDAGTI AHG
Sbjct: 142  TGIHIPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAGTINAHG 201

Query: 731  SETVKIPITLLYDDIKNTYDDIKPGSIIPYKIKVELIVDVPIFGRLTLPLEKTGEIPIPY 910
            SETVKIP++L+YDDIKNTY DIKPGSIIPYKIKV LIVDVP+FGRLTLPLEKTGEIPIPY
Sbjct: 202  SETVKIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVFGRLTLPLEKTGEIPIPY 261

Query: 911  KPDVDVEKISFKKFSFEETVALLHLKLENMNDFDLGLNALSSEIWLSGVSIGGAKLTESS 1090
            KPD+D+EK+ F+ FSFEETVA+LHLKL+N NDFDLGLN L  E+WL+ VSIGGA+L++S+
Sbjct: 262  KPDIDLEKVQFQSFSFEETVAVLHLKLDNKNDFDLGLNGLDYEVWLADVSIGGAELSKSA 321

Query: 1091 KIDKNGISYIDLPITFRPKDLGSAVWDMIRGRGTGYSIKGDIDVDTPFGAMKLPISKEGG 1270
            KI+KNGIS I+LPITFRP++ GSA+WDMIRG+GTGY++KG+IDVDTPFGAMKLPISKEGG
Sbjct: 322  KIEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNIDVDTPFGAMKLPISKEGG 381

Query: 1271 TTSIKKNK 1294
            +T +KK+K
Sbjct: 382  STRLKKDK 389


>ref|XP_002280489.1| PREDICTED: uncharacterized protein LOC100266227 [Vitis vinifera]
          Length = 315

 Score =  436 bits (1120), Expect = e-119
 Identities = 209/279 (74%), Positives = 244/279 (87%)
 Frame = +2

Query: 458  GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVXXXXXXXXXX 637
            GGFI+KVKDFI +IGEKIEEA+GFGKPTADVTGIHIP I L++ADIV+DV          
Sbjct: 26   GGFIEKVKDFIHDIGEKIEEAIGFGKPTADVTGIHIPKINLERADIVIDVLVTNPNPIPI 85

Query: 638  XXXXXXXXVESAGRKLVSGLIPDAGTIRAHGSETVKIPITLLYDDIKNTYDDIKPGSIIP 817
                    +ES GRKLVSGLIPDAGTI AHGSETVKIP++L+YDDIKNTY DIKPGSIIP
Sbjct: 86   PLVDIDYLIESDGRKLVSGLIPDAGTINAHGSETVKIPVSLIYDDIKNTYSDIKPGSIIP 145

Query: 818  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 997
            YKIKV LIVDVP+FGRLTLPLEKTGEIPIPYKPD+D+EK+ F+ FSFEETVA+LHLKL+N
Sbjct: 146  YKIKVNLIVDVPVFGRLTLPLEKTGEIPIPYKPDIDLEKVQFQSFSFEETVAVLHLKLDN 205

Query: 998  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 1177
             NDFDLGLN L  E+WL+ VSIGGA+L++S+KI+KNGIS I+LPITFRP++ GSA+WDMI
Sbjct: 206  KNDFDLGLNGLDYEVWLADVSIGGAELSKSAKIEKNGISCIELPITFRPREFGSALWDMI 265

Query: 1178 RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 1294
            RG+GTGY++KG+IDVDTPFGAMKLPISKEGG+T +KK+K
Sbjct: 266  RGKGTGYTMKGNIDVDTPFGAMKLPISKEGGSTRLKKDK 304


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