BLASTX nr result
ID: Coptis21_contig00002298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002298
(3836 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11... 592 e-166
emb|CBI15248.3| unnamed protein product [Vitis vinifera] 590 e-166
emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera] 582 e-163
ref|XP_003631294.1| PREDICTED: F-box/kelch-repeat protein SKIP11... 551 e-154
ref|XP_003527067.1| PREDICTED: F-box/kelch-repeat protein At1g74... 547 e-153
>ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
Length = 443
Score = 592 bits (1525), Expect = e-166
Identities = 295/422 (69%), Positives = 339/422 (80%), Gaps = 14/422 (3%)
Frame = -1
Query: 1745 YHDFVQVNLK-VKRPLDKEGNESLFGKRKSCRLLDMQARDEMTNTLYHLSLSPADHSGQQ 1569
Y+ F+ + L KRPL+ +G + G RK + D +E L+ LSLS A+ S
Sbjct: 25 YNTFLVIELSNSKRPLE-DGED--VGLRKFSKPSDGHETEETMQGLHDLSLSQANQSNTH 81
Query: 1568 GNDGNQADTSSLIQSLGRDISINCLLRCSRSDYNKIASLNSSFRNLIRSGELYRLRRQMG 1389
+ G+Q+D SSLI +GRD SINCLL+CSRSDY IASLN SFR+LIR GELYRLRR++G
Sbjct: 82 HDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIASLNRSFRSLIRGGELYRLRRKLG 141
Query: 1388 VIEHWVYFSCDVLEWDAFDPISRRWMHLPRMPSNECFRCSDKESVAVGTELLVFGKEITS 1209
++EHWVYFSCD+L+W+AFDPI RRWMHLPRMPS ECF CSDKES+AVGTELLVFGKE+TS
Sbjct: 142 IVEHWVYFSCDLLQWEAFDPIRRRWMHLPRMPSYECFMCSDKESLAVGTELLVFGKEVTS 201
Query: 1208 HVIWKYSILTNSWSSGMEMNAPRCLFGSASLGEIAILAGGCDSQGRVLSSAELYNSETGT 1029
HV++KYSILTNSWSSGM MN+PRCLFGSASLGEIAILAGGCD +G +LSSAELYNS+TGT
Sbjct: 202 HVVYKYSILTNSWSSGMNMNSPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSDTGT 261
Query: 1028 WVTLPSMQKPRKMCSGVFMDGKFYVIGG---SNTELLSCGEEYNLETKTWREIPNMCPRR 858
WVTLPSM KPRKMCSG+FMD KFYVIGG N+ L+CGE Y+LE +TWREIPNM P R
Sbjct: 262 WVTLPSMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSLTCGEVYDLEMRTWREIPNMFPGR 321
Query: 857 TG----------PAEAPPLVAVVNNELYAADYAERELMKYNKDRISWDTVGKLPERASSM 708
G AEAPPLVAVVNNELYAADYAE+E+ KY+K R W TVG+LPE+A SM
Sbjct: 322 NGSAGVAEATPAAAEAPPLVAVVNNELYAADYAEKEVRKYDKARNLWVTVGRLPEQAVSM 381
Query: 707 NGWGLAFRACGEQLIVIGGPRMLGGGIIELNSWIPKEGQPQWIELARKPSASFVYNCAVM 528
NGWGLAFRACG++LIVIGGPR+LGGGIIELNSW P EG PQW LARK S SFVYNCAVM
Sbjct: 382 NGWGLAFRACGDRLIVIGGPRVLGGGIIELNSWSPGEGPPQWDLLARKQSGSFVYNCAVM 441
Query: 527 GC 522
GC
Sbjct: 442 GC 443
Score = 59.3 bits (142), Expect = 8e-06
Identities = 38/93 (40%), Positives = 54/93 (58%)
Frame = -1
Query: 2453 MLEERSCLFSRALRTSCEQDTKWVYMTYHFMEVSHGKRRLDDDDGEEEVFGKRKSPKRLG 2274
MLE S L SR L +CEQ++KW+Y T+ +E+S+ KR L +DGE+ G RK K
Sbjct: 1 MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPL--EDGED--VGLRKFSKPSD 56
Query: 2273 KYEPDGIMPTLHNLFPSPDDQSDQFGCDWDQAD 2175
+E + M LH+L S +QS+ DQ+D
Sbjct: 57 GHETEETMQGLHDLSLSQANQSNTHHDTGDQSD 89
>emb|CBI15248.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 590 bits (1522), Expect = e-166
Identities = 283/373 (75%), Positives = 319/373 (85%), Gaps = 3/373 (0%)
Frame = -1
Query: 1631 DEMTNTLYHLSLSPADHSGQQGNDGNQADTSSLIQSLGRDISINCLLRCSRSDYNKIASL 1452
DE L+ LSLS A+ S + G+Q+D SSLI +GRD SINCLL+CSRSDY IASL
Sbjct: 110 DETMQGLHDLSLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIASL 169
Query: 1451 NSSFRNLIRSGELYRLRRQMGVIEHWVYFSCDVLEWDAFDPISRRWMHLPRMPSNECFRC 1272
N SFR+LIR GELYRLRR++G++EHWVYFSCD+L+W+AFDPI RRWMHLPRMPS ECF C
Sbjct: 170 NRSFRSLIRGGELYRLRRKLGIVEHWVYFSCDLLQWEAFDPIRRRWMHLPRMPSYECFMC 229
Query: 1271 SDKESVAVGTELLVFGKEITSHVIWKYSILTNSWSSGMEMNAPRCLFGSASLGEIAILAG 1092
SDKES+AVGTELLVFGKE+TSHV++KYSILTNSWSSGM MN+PRCLFGSASLGEIAILAG
Sbjct: 230 SDKESLAVGTELLVFGKEVTSHVVYKYSILTNSWSSGMNMNSPRCLFGSASLGEIAILAG 289
Query: 1091 GCDSQGRVLSSAELYNSETGTWVTLPSMQKPRKMCSGVFMDGKFYVIGG---SNTELLSC 921
GCD +G +LSSAELYNS+TGTWVTLPSM KPRKMCSG+FMD KFYVIGG N+ L+C
Sbjct: 290 GCDPRGNILSSAELYNSDTGTWVTLPSMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSLTC 349
Query: 920 GEEYNLETKTWREIPNMCPRRTGPAEAPPLVAVVNNELYAADYAERELMKYNKDRISWDT 741
GE Y+LE +TWREIPNM P R G A APPLVAVVNNELYAADYAE+E+ KY+K R W T
Sbjct: 350 GEVYDLEMRTWREIPNMFPGRNGSAGAPPLVAVVNNELYAADYAEKEVRKYDKARNLWVT 409
Query: 740 VGKLPERASSMNGWGLAFRACGEQLIVIGGPRMLGGGIIELNSWIPKEGQPQWIELARKP 561
VG+LPE+A SMNGWGLAFRACG++LIVIGGPR+LGGGIIELNSW P EG PQW LARK
Sbjct: 410 VGRLPEQAVSMNGWGLAFRACGDRLIVIGGPRVLGGGIIELNSWSPGEGPPQWDLLARKQ 469
Query: 560 SASFVYNCAVMGC 522
S SFVYNCAVMGC
Sbjct: 470 SGSFVYNCAVMGC 482
>emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]
Length = 1318
Score = 582 bits (1501), Expect = e-163
Identities = 291/418 (69%), Positives = 335/418 (80%), Gaps = 14/418 (3%)
Frame = -1
Query: 1745 YHDFVQVNLK-VKRPLDKEGNESLFGKRKSCRLLDMQARDEMTNTLYHLSLSPADHSGQQ 1569
Y+ F+ + L KRPL+ +G + G RK + D +E L+ LSLS A+ S
Sbjct: 25 YNTFLVIELSNSKRPLE-DGED--VGLRKFSKPSDGHETEETMQGLHDLSLSQANQSNTH 81
Query: 1568 GNDGNQADTSSLIQSLGRDISINCLLRCSRSDYNKIASLNSSFRNLIRSGELYRLRRQMG 1389
+ G+Q+D SSLI +GRD SINCLL+CSRSDY IASLN SFR+LIR GELYRLRR++G
Sbjct: 82 HDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIASLNRSFRSLIRGGELYRLRRKLG 141
Query: 1388 VIEHWVYFSCDVLEWDAFDPISRRWMHLPRMPSNECFRCSDKESVAVGTELLVFGKEITS 1209
++EHWVYFSCD+L+W+AFDPI RRWMHLPRMPS ECF CSDKES+AVGTELLVFGKE+TS
Sbjct: 142 IVEHWVYFSCDLLQWEAFDPIRRRWMHLPRMPSYECFMCSDKESLAVGTELLVFGKEVTS 201
Query: 1208 HVIWKYSILTNSWSSGMEMNAPRCLFGSASLGEIAILAGGCDSQGRVLSSAELYNSETGT 1029
HV++KYSILTNSWSSGM MN+PRCLFGSASLGEIAILAGGCD +G +LSSAELYNS+TGT
Sbjct: 202 HVVYKYSILTNSWSSGMNMNSPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSDTGT 261
Query: 1028 WVTLPSMQKPRKMCSGVFMDGKFYVIGG---SNTELLSCGEEYNLETKTWREIPNMCPRR 858
WVTLPSM KPRKMCSG+FMD KFYVIGG N+ L+CGE Y+LE +TWREIPNM P R
Sbjct: 262 WVTLPSMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSLTCGEVYDLEMRTWREIPNMFPGR 321
Query: 857 TG----------PAEAPPLVAVVNNELYAADYAERELMKYNKDRISWDTVGKLPERASSM 708
G AEAPPLVAVVNNELYAADYAE+E+ KY+K R W TVG+LPE+A SM
Sbjct: 322 NGSAGVAEATPAAAEAPPLVAVVNNELYAADYAEKEVRKYDKARNLWVTVGRLPEQAVSM 381
Query: 707 NGWGLAFRACGEQLIVIGGPRMLGGGIIELNSWIPKEGQPQWIELARKPSASFVYNCA 534
NGWGLAFRACG++LIVIGGPR+LGGGIIELNSW P EG PQW LARK S SFVYNCA
Sbjct: 382 NGWGLAFRACGDRLIVIGGPRVLGGGIIELNSWSPGEGPPQWDLLARKQSGSFVYNCA 439
Score = 59.3 bits (142), Expect = 8e-06
Identities = 38/93 (40%), Positives = 54/93 (58%)
Frame = -1
Query: 2453 MLEERSCLFSRALRTSCEQDTKWVYMTYHFMEVSHGKRRLDDDDGEEEVFGKRKSPKRLG 2274
MLE S L SR L +CEQ++KW+Y T+ +E+S+ KR L +DGE+ G RK K
Sbjct: 1 MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPL--EDGED--VGLRKFSKPSD 56
Query: 2273 KYEPDGIMPTLHNLFPSPDDQSDQFGCDWDQAD 2175
+E + M LH+L S +QS+ DQ+D
Sbjct: 57 GHETEETMQGLHDLSLSQANQSNTHHDTGDQSD 89
>ref|XP_003631294.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
Length = 541
Score = 551 bits (1419), Expect = e-154
Identities = 272/381 (71%), Positives = 305/381 (80%), Gaps = 11/381 (2%)
Frame = -1
Query: 1631 DEMTNTLYHLSLSPADHSGQQGNDGNQADTSSLIQSLGRDISINCLLRCSRSDYNKIASL 1452
DE +LSLS AD S Q +D SLIQ +GRD+SI+CL+RCSRSDY IASL
Sbjct: 161 DESDKPGINLSLSLADQSNSQHQAEFNSDLDSLIQPIGRDLSISCLIRCSRSDYGFIASL 220
Query: 1451 NSSFRNLIRSGELYRLRRQMGVIEHWVYFSCDVLEWDAFDPISRRWMHLPRMPSNECFRC 1272
N SFR++IRSGELYR RR+ GVIEHW+YFSC +LEW+AFDPI RWM LP M NECF C
Sbjct: 221 NRSFRSIIRSGELYRERRKNGVIEHWIYFSCQLLEWEAFDPIRHRWMRLPTMTFNECFMC 280
Query: 1271 SDKESVAVGTELLVFGKEITSHVIWKYSILTNSWSSGMEMNAPRCLFGSASLGEIAILAG 1092
SDKES+AVGTELLVFGKE+ SHVI++YSILTNSWSSGM MNAPRCLFGSASLGEIAILAG
Sbjct: 281 SDKESLAVGTELLVFGKEVMSHVIYRYSILTNSWSSGMSMNAPRCLFGSASLGEIAILAG 340
Query: 1091 GCDSQGRVLSSAELYNSETGTWVTLPSMQKPRKMCSGVFMDGKFYV---IGGSNTELLSC 921
GCDSQG +LSSAELYNSETG W LPSM KPRKMCSGVFMDGKFYV IGGS+++ L C
Sbjct: 341 GCDSQGNILSSAELYNSETGAWEMLPSMNKPRKMCSGVFMDGKFYVIGGIGGSDSKPLPC 400
Query: 920 GEEYNLETKTWREIPNMCPRRTG--------PAEAPPLVAVVNNELYAADYAERELMKYN 765
GEEYNL+T+ W EI +M P R+G AEAPPLVAVVNNELYAADYA+ E+ KY
Sbjct: 401 GEEYNLQTRVWTEIADMSPVRSGAPRENETAAAEAPPLVAVVNNELYAADYADMEVRKYE 460
Query: 764 KDRISWDTVGKLPERASSMNGWGLAFRACGEQLIVIGGPRMLGGGIIELNSWIPKEGQPQ 585
K+ W TVG+LPERA SMNGWGLAFRACG++L+VIGGPR LG G IELNSW+P EG PQ
Sbjct: 461 KESRLWLTVGRLPERAVSMNGWGLAFRACGDKLVVIGGPRALGEGFIELNSWVPSEGPPQ 520
Query: 584 WIELARKPSASFVYNCAVMGC 522
W LA K S +FVYNCAVMGC
Sbjct: 521 WNVLAVKQSGNFVYNCAVMGC 541
>ref|XP_003527067.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Glycine max]
Length = 441
Score = 547 bits (1410), Expect = e-153
Identities = 275/421 (65%), Positives = 326/421 (77%), Gaps = 13/421 (3%)
Frame = -1
Query: 1745 YHDFVQVNLKV-KRPLDKEGNESLFGKRKSCRLLDMQARDEMTNTLYHLSLSPADHSGQQ 1569
Y+ F + L KR L+ E L KSC+L D E +LSLS + + Q
Sbjct: 25 YNSFCVMELASNKRQLELEEEAVL---TKSCKLSDAPEEGETKMNFQNLSLS-VNQANDQ 80
Query: 1568 GNDGNQADTSSLIQSLGRDISINCLLRCSRSDYNKIASLNSSFRNLIRSGELYRLRRQMG 1389
+ +Q+D+SSLI LGRDISINCLLRCSRSDY IASLN SFR+L+R+GELYRLRRQMG
Sbjct: 81 NHSSDQSDSSSLIFQLGRDISINCLLRCSRSDYGSIASLNQSFRSLVRTGELYRLRRQMG 140
Query: 1388 VIEHWVYFSCDVLEWDAFDPISRRWMHLPRMPSNECFRCSDKESVAVGTELLVFGKEITS 1209
+IEHWVYFSC++ EW+AFDP +RRWM LPRMPSNECF CSDKES+AVGTELLVFGKEI S
Sbjct: 141 IIEHWVYFSCNLPEWEAFDPNTRRWMRLPRMPSNECFICSDKESLAVGTELLVFGKEIMS 200
Query: 1208 HVIWKYSILTNSWSSGMEMNAPRCLFGSASLGEIAILAGGCDSQGRVLSSAELYNSETGT 1029
VI++YSIL N+WSSGM MN PRCLFGSASLGE+AILAGGCD +G +LSSAELYNSETGT
Sbjct: 201 PVIYRYSILMNAWSSGMIMNVPRCLFGSASLGEVAILAGGCDPRGNILSSAELYNSETGT 260
Query: 1028 WVTLPSMQKPRKMCSGVFMDGKFYVIGG---SNTELLSCGEEYNLETKTWREIPNMCPRR 858
W LP+M K RKMCSGVF+DGKFYVIGG N++ L+CGEE++L+T+ WREIPNM PRR
Sbjct: 261 WELLPNMNKARKMCSGVFIDGKFYVIGGIGVGNSKQLTCGEEFDLQTRKWREIPNMFPRR 320
Query: 857 TG---------PAEAPPLVAVVNNELYAADYAERELMKYNKDRISWDTVGKLPERASSMN 705
G AEAPPLVAVVNN LY+ADYA++E+ +Y+KD W T+G+LP+R SMN
Sbjct: 321 HGGTEATEVSAAAEAPPLVAVVNNVLYSADYAQQEVRRYDKDNNLWFTIGRLPDRIVSMN 380
Query: 704 GWGLAFRACGEQLIVIGGPRMLGGGIIELNSWIPKEGQPQWIELARKPSASFVYNCAVMG 525
GWGLAFRACG +LIVIGGPR L G +IE+N+ +P EG P+W LA + S SFVYNCAVMG
Sbjct: 381 GWGLAFRACGNRLIVIGGPRALDGRVIEINACVPGEGVPEWNLLASRQSGSFVYNCAVMG 440
Query: 524 C 522
C
Sbjct: 441 C 441