BLASTX nr result

ID: Coptis21_contig00002297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002297
         (2555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   654   0.0  
emb|CBI15248.3| unnamed protein product [Vitis vinifera]              646   0.0  
emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]   645   0.0  
ref|XP_003523035.1| PREDICTED: F-box/kelch-repeat protein At1g74...   599   e-168
ref|XP_003527067.1| PREDICTED: F-box/kelch-repeat protein At1g74...   597   e-168

>ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 443

 Score =  654 bits (1688), Expect = 0.0
 Identities = 325/445 (73%), Positives = 361/445 (81%), Gaps = 13/445 (2%)
 Frame = +1

Query: 772  MLEGQSCLISRALPSSCEQESKWVYMTYHLLEVTNGKRRLEEESDEEVVRRKTLKQMDVC 951
            MLEG S LISR LP++CEQESKW+Y T+ ++E++N KR LE+   E+V  RK  K  D  
Sbjct: 1    MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPLED--GEDVGLRKFSKPSDGH 58

Query: 952  EREETIHTLLDLSLSPAXXXXXXXXXXXXXXXXXLIQPLGRDISINCLIRCSRSDYNLLA 1131
            E EET+  L DLSLS A                 LI  +GRD SINCL++CSRSDY  +A
Sbjct: 59   ETEETMQGLHDLSLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIA 118

Query: 1132 SLNRSFNSLIRSGELYRLRRMMGVVEHWVYFSCHVLEWEAFDPIRRRWMHLPRMPANECF 1311
            SLNRSF SLIR GELYRLRR +G+VEHWVYFSC +L+WEAFDPIRRRWMHLPRMP+ ECF
Sbjct: 119  SLNRSFRSLIRGGELYRLRRKLGIVEHWVYFSCDLLQWEAFDPIRRRWMHLPRMPSYECF 178

Query: 1312 MCSDKESLAVGTELLVFGKEITSHVIWRYSILTNSWSSGMTMNFPRCLFGSASLGEIAIL 1491
            MCSDKESLAVGTELLVFGKE+TSHV+++YSILTNSWSSGM MN PRCLFGSASLGEIAIL
Sbjct: 179  MCSDKESLAVGTELLVFGKEVTSHVVYKYSILTNSWSSGMNMNSPRCLFGSASLGEIAIL 238

Query: 1492 AGGCDSQGRVLCSAELYNSETGTWVTLPSMNKPRKMCSGVFMDGKFYVIGG---SNSELL 1662
            AGGCD +G +L SAELYNS+TGTWVTLPSMNKPRKMCSG+FMD KFYVIGG    NS  L
Sbjct: 239  AGGCDPRGNILSSAELYNSDTGTWVTLPSMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSL 298

Query: 1663 SCGEEYNLETRTWREIPNMFPGRNG----------PTEAPPLVAVVNNQLYAADYAEKEV 1812
            +CGE Y+LE RTWREIPNMFPGRNG            EAPPLVAVVNN+LYAADYAEKEV
Sbjct: 299  TCGEVYDLEMRTWREIPNMFPGRNGSAGVAEATPAAAEAPPLVAVVNNELYAADYAEKEV 358

Query: 1813 RKYNKEQNLWITVGRLPERAVSMNGWGLAFRACGDRLIVIGGPRALGGGIIELNSWVPKE 1992
            RKY+K +NLW+TVGRLPE+AVSMNGWGLAFRACGDRLIVIGGPR LGGGIIELNSW P E
Sbjct: 359  RKYDKARNLWVTVGRLPEQAVSMNGWGLAFRACGDRLIVIGGPRVLGGGIIELNSWSPGE 418

Query: 1993 GLPQWAVLDRKHSGSFVYNCAVMGC 2067
            G PQW +L RK SGSFVYNCAVMGC
Sbjct: 419  GPPQWDLLARKQSGSFVYNCAVMGC 443


>emb|CBI15248.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  646 bits (1667), Expect = 0.0
 Identities = 317/435 (72%), Positives = 352/435 (80%), Gaps = 3/435 (0%)
 Frame = +1

Query: 772  MLEGQSCLISRALPSSCEQESKWVYMTYHLLEVTNGKRRLEEESDEEVVRRKTLKQMDVC 951
            MLEG S LISR LP++CEQESKW+Y T+ ++E++N KR LE+  DE              
Sbjct: 66   MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPLEDGEDE-------------- 111

Query: 952  EREETIHTLLDLSLSPAXXXXXXXXXXXXXXXXXLIQPLGRDISINCLIRCSRSDYNLLA 1131
                T+  L DLSLS A                 LI  +GRD SINCL++CSRSDY  +A
Sbjct: 112  ----TMQGLHDLSLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIA 167

Query: 1132 SLNRSFNSLIRSGELYRLRRMMGVVEHWVYFSCHVLEWEAFDPIRRRWMHLPRMPANECF 1311
            SLNRSF SLIR GELYRLRR +G+VEHWVYFSC +L+WEAFDPIRRRWMHLPRMP+ ECF
Sbjct: 168  SLNRSFRSLIRGGELYRLRRKLGIVEHWVYFSCDLLQWEAFDPIRRRWMHLPRMPSYECF 227

Query: 1312 MCSDKESLAVGTELLVFGKEITSHVIWRYSILTNSWSSGMTMNFPRCLFGSASLGEIAIL 1491
            MCSDKESLAVGTELLVFGKE+TSHV+++YSILTNSWSSGM MN PRCLFGSASLGEIAIL
Sbjct: 228  MCSDKESLAVGTELLVFGKEVTSHVVYKYSILTNSWSSGMNMNSPRCLFGSASLGEIAIL 287

Query: 1492 AGGCDSQGRVLCSAELYNSETGTWVTLPSMNKPRKMCSGVFMDGKFYVIGG---SNSELL 1662
            AGGCD +G +L SAELYNS+TGTWVTLPSMNKPRKMCSG+FMD KFYVIGG    NS  L
Sbjct: 288  AGGCDPRGNILSSAELYNSDTGTWVTLPSMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSL 347

Query: 1663 SCGEEYNLETRTWREIPNMFPGRNGPTEAPPLVAVVNNQLYAADYAEKEVRKYNKEQNLW 1842
            +CGE Y+LE RTWREIPNMFPGRNG   APPLVAVVNN+LYAADYAEKEVRKY+K +NLW
Sbjct: 348  TCGEVYDLEMRTWREIPNMFPGRNGSAGAPPLVAVVNNELYAADYAEKEVRKYDKARNLW 407

Query: 1843 ITVGRLPERAVSMNGWGLAFRACGDRLIVIGGPRALGGGIIELNSWVPKEGLPQWAVLDR 2022
            +TVGRLPE+AVSMNGWGLAFRACGDRLIVIGGPR LGGGIIELNSW P EG PQW +L R
Sbjct: 408  VTVGRLPEQAVSMNGWGLAFRACGDRLIVIGGPRVLGGGIIELNSWSPGEGPPQWDLLAR 467

Query: 2023 KHSGSFVYNCAVMGC 2067
            K SGSFVYNCAVMGC
Sbjct: 468  KQSGSFVYNCAVMGC 482


>emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]
          Length = 1318

 Score =  645 bits (1664), Expect = 0.0
 Identities = 321/441 (72%), Positives = 357/441 (80%), Gaps = 13/441 (2%)
 Frame = +1

Query: 772  MLEGQSCLISRALPSSCEQESKWVYMTYHLLEVTNGKRRLEEESDEEVVRRKTLKQMDVC 951
            MLEG S LISR LP++CEQESKW+Y T+ ++E++N KR LE+   E+V  RK  K  D  
Sbjct: 1    MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPLED--GEDVGLRKFSKPSDGH 58

Query: 952  EREETIHTLLDLSLSPAXXXXXXXXXXXXXXXXXLIQPLGRDISINCLIRCSRSDYNLLA 1131
            E EET+  L DLSLS A                 LI  +GRD SINCL++CSRSDY  +A
Sbjct: 59   ETEETMQGLHDLSLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIA 118

Query: 1132 SLNRSFNSLIRSGELYRLRRMMGVVEHWVYFSCHVLEWEAFDPIRRRWMHLPRMPANECF 1311
            SLNRSF SLIR GELYRLRR +G+VEHWVYFSC +L+WEAFDPIRRRWMHLPRMP+ ECF
Sbjct: 119  SLNRSFRSLIRGGELYRLRRKLGIVEHWVYFSCDLLQWEAFDPIRRRWMHLPRMPSYECF 178

Query: 1312 MCSDKESLAVGTELLVFGKEITSHVIWRYSILTNSWSSGMTMNFPRCLFGSASLGEIAIL 1491
            MCSDKESLAVGTELLVFGKE+TSHV+++YSILTNSWSSGM MN PRCLFGSASLGEIAIL
Sbjct: 179  MCSDKESLAVGTELLVFGKEVTSHVVYKYSILTNSWSSGMNMNSPRCLFGSASLGEIAIL 238

Query: 1492 AGGCDSQGRVLCSAELYNSETGTWVTLPSMNKPRKMCSGVFMDGKFYVIGG---SNSELL 1662
            AGGCD +G +L SAELYNS+TGTWVTLPSMNKPRKMCSG+FMD KFYVIGG    NS  L
Sbjct: 239  AGGCDPRGNILSSAELYNSDTGTWVTLPSMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSL 298

Query: 1663 SCGEEYNLETRTWREIPNMFPGRNG----------PTEAPPLVAVVNNQLYAADYAEKEV 1812
            +CGE Y+LE RTWREIPNMFPGRNG            EAPPLVAVVNN+LYAADYAEKEV
Sbjct: 299  TCGEVYDLEMRTWREIPNMFPGRNGSAGVAEATPAAAEAPPLVAVVNNELYAADYAEKEV 358

Query: 1813 RKYNKEQNLWITVGRLPERAVSMNGWGLAFRACGDRLIVIGGPRALGGGIIELNSWVPKE 1992
            RKY+K +NLW+TVGRLPE+AVSMNGWGLAFRACGDRLIVIGGPR LGGGIIELNSW P E
Sbjct: 359  RKYDKARNLWVTVGRLPEQAVSMNGWGLAFRACGDRLIVIGGPRVLGGGIIELNSWSPGE 418

Query: 1993 GLPQWAVLDRKHSGSFVYNCA 2055
            G PQW +L RK SGSFVYNCA
Sbjct: 419  GPPQWDLLARKQSGSFVYNCA 439


>ref|XP_003523035.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Glycine max]
          Length = 441

 Score =  599 bits (1545), Expect = e-168
 Identities = 297/444 (66%), Positives = 353/444 (79%), Gaps = 12/444 (2%)
 Frame = +1

Query: 772  MLEGQSCLISRALPSSCEQESKWVYMTYHLLEVTNGKRRLEEESDEEVVRRKTLKQMDVC 951
            MLEG + L+SR + SSCEQE++W+Y ++ ++E+ + KRRLE E  EE V  K+ K  D  
Sbjct: 1    MLEGPTFLVSRDILSSCEQETRWIYNSFCVMELASNKRRLELE--EEAVLTKSCKLSDAP 58

Query: 952  EREETIHTLLDLSLSPAXXXXXXXXXXXXXXXXXLIQPLGRDISINCLIRCSRSDYNLLA 1131
            E+ ET  ++ DLSLS                   LI  LGRDISINCL+RCSRSDY  +A
Sbjct: 59   EKGETKKSIQDLSLS-VNQANAQNHSSDQSDSSSLIFQLGRDISINCLLRCSRSDYGSVA 117

Query: 1132 SLNRSFNSLIRSGELYRLRRMMGVVEHWVYFSCHVLEWEAFDPIRRRWMHLPRMPANECF 1311
            SLN+SF SLIR+GELYRLRR M ++EHWVYFSC++ EWEAFDP  RRWM LPRMP+NECF
Sbjct: 118  SLNQSFRSLIRTGELYRLRRQMSIIEHWVYFSCNLPEWEAFDPNTRRWMRLPRMPSNECF 177

Query: 1312 MCSDKESLAVGTELLVFGKEITSHVIWRYSILTNSWSSGMTMNFPRCLFGSASLGEIAIL 1491
            +CSDKESLAVGTELLVFGKEI S VI+RYSIL N+WSSGM MN PRCLFGSASLGEIAIL
Sbjct: 178  ICSDKESLAVGTELLVFGKEIMSPVIYRYSILMNAWSSGMEMNIPRCLFGSASLGEIAIL 237

Query: 1492 AGGCDSQGRVLCSAELYNSETGTWVTLPSMNKPRKMCSGVFMDGKFYVIGG---SNSELL 1662
            AGGCD +G +L SAELYNSETGTW  LP+MNK RKMCSGVF+DGKFYVIGG    NS+ L
Sbjct: 238  AGGCDPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIDGKFYVIGGIGVGNSKQL 297

Query: 1663 SCGEEYNLETRTWREIPNMFPGRNGPT---------EAPPLVAVVNNQLYAADYAEKEVR 1815
            +CGEE++L+TR W++IPNMFPGRNG T         EAPPLVAVVNN LY+ADYA++EVR
Sbjct: 298  TCGEEFDLQTRKWQKIPNMFPGRNGGTEATEVSSAAEAPPLVAVVNNVLYSADYAQQEVR 357

Query: 1816 KYNKEQNLWITVGRLPERAVSMNGWGLAFRACGDRLIVIGGPRALGGGIIELNSWVPKEG 1995
            +Y+K+ NLW+T+GRLP+R VSMNGWGLAFRACG+RLIVIGGPRAL G +IE+N+ VP EG
Sbjct: 358  RYDKDNNLWVTIGRLPDRIVSMNGWGLAFRACGNRLIVIGGPRALDGRVIEINACVPGEG 417

Query: 1996 LPQWAVLDRKHSGSFVYNCAVMGC 2067
            +P+W +L  + SGSFVYNCAVMGC
Sbjct: 418  VPEWNLLASRQSGSFVYNCAVMGC 441


>ref|XP_003527067.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Glycine max]
          Length = 441

 Score =  597 bits (1538), Expect = e-168
 Identities = 296/444 (66%), Positives = 350/444 (78%), Gaps = 12/444 (2%)
 Frame = +1

Query: 772  MLEGQSCLISRALPSSCEQESKWVYMTYHLLEVTNGKRRLEEESDEEVVRRKTLKQMDVC 951
            MLEG + L+SR LPSSCEQE++W+Y ++ ++E+ + KR+LE E  EE V  K+ K  D  
Sbjct: 1    MLEGPTFLVSRDLPSSCEQETRWIYNSFCVMELASNKRQLELE--EEAVLTKSCKLSDAP 58

Query: 952  EREETIHTLLDLSLSPAXXXXXXXXXXXXXXXXXLIQPLGRDISINCLIRCSRSDYNLLA 1131
            E  ET     +LSLS                   LI  LGRDISINCL+RCSRSDY  +A
Sbjct: 59   EEGETKMNFQNLSLS-VNQANDQNHSSDQSDSSSLIFQLGRDISINCLLRCSRSDYGSIA 117

Query: 1132 SLNRSFNSLIRSGELYRLRRMMGVVEHWVYFSCHVLEWEAFDPIRRRWMHLPRMPANECF 1311
            SLN+SF SL+R+GELYRLRR MG++EHWVYFSC++ EWEAFDP  RRWM LPRMP+NECF
Sbjct: 118  SLNQSFRSLVRTGELYRLRRQMGIIEHWVYFSCNLPEWEAFDPNTRRWMRLPRMPSNECF 177

Query: 1312 MCSDKESLAVGTELLVFGKEITSHVIWRYSILTNSWSSGMTMNFPRCLFGSASLGEIAIL 1491
            +CSDKESLAVGTELLVFGKEI S VI+RYSIL N+WSSGM MN PRCLFGSASLGE+AIL
Sbjct: 178  ICSDKESLAVGTELLVFGKEIMSPVIYRYSILMNAWSSGMIMNVPRCLFGSASLGEVAIL 237

Query: 1492 AGGCDSQGRVLCSAELYNSETGTWVTLPSMNKPRKMCSGVFMDGKFYVIGG---SNSELL 1662
            AGGCD +G +L SAELYNSETGTW  LP+MNK RKMCSGVF+DGKFYVIGG    NS+ L
Sbjct: 238  AGGCDPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIDGKFYVIGGIGVGNSKQL 297

Query: 1663 SCGEEYNLETRTWREIPNMFPGRNGPT---------EAPPLVAVVNNQLYAADYAEKEVR 1815
            +CGEE++L+TR WREIPNMFP R+G T         EAPPLVAVVNN LY+ADYA++EVR
Sbjct: 298  TCGEEFDLQTRKWREIPNMFPRRHGGTEATEVSAAAEAPPLVAVVNNVLYSADYAQQEVR 357

Query: 1816 KYNKEQNLWITVGRLPERAVSMNGWGLAFRACGDRLIVIGGPRALGGGIIELNSWVPKEG 1995
            +Y+K+ NLW T+GRLP+R VSMNGWGLAFRACG+RLIVIGGPRAL G +IE+N+ VP EG
Sbjct: 358  RYDKDNNLWFTIGRLPDRIVSMNGWGLAFRACGNRLIVIGGPRALDGRVIEINACVPGEG 417

Query: 1996 LPQWAVLDRKHSGSFVYNCAVMGC 2067
            +P+W +L  + SGSFVYNCAVMGC
Sbjct: 418  VPEWNLLASRQSGSFVYNCAVMGC 441


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