BLASTX nr result

ID: Coptis21_contig00002290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002290
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531873.1| methylenetetrahydrofolate dehydrogenase, put...   204   6e-51
ref|NP_001239823.1| uncharacterized protein LOC100783652 [Glycin...   196   2e-48
gb|ABK96126.1| unknown [Populus trichocarpa]                          196   3e-48
ref|XP_004152261.1| PREDICTED: c-1-tetrahydrofolate synthase, cy...   194   6e-48
gb|AAM62762.1| 5,10-methylenetetrahydrofolate dehydrogenase:5,10...   194   8e-48

>ref|XP_002531873.1| methylenetetrahydrofolate dehydrogenase, putative [Ricinus
           communis] gi|223528481|gb|EEF30510.1|
           methylenetetrahydrofolate dehydrogenase, putative
           [Ricinus communis]
          Length = 299

 Score =  204 bits (520), Expect = 6e-51
 Identities = 113/172 (65%), Positives = 120/172 (69%)
 Frame = +2

Query: 41  KATIIDGKAIAHTIRSEIALEVQQLSTKYGKVPGLAVIIVGSRKDSQSYVNMKRKACAEV 220
           KATIIDGKAIA TIRSEIA EV+QLS KYGKVPGLAV+IVG+RKDSQSYV+MKRKACAEV
Sbjct: 8   KATIIDGKAIAQTIRSEIADEVRQLSEKYGKVPGLAVVIVGNRKDSQSYVSMKRKACAEV 67

Query: 221 GIKSYDINLPEQVPEAELIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 400
           GIKS+DINLPEQV EAELI K                                       
Sbjct: 68  GIKSFDINLPEQVSEAELISK---------------------------VHELNANTDVHG 100

Query: 401 XXXXLPLPAHINEENVLNEISIEKDVDGFHPLNIGKLGMKGRDPLFQPCTPK 556
               LPLP HINEE VL+EISIEKDVDGFHPLNIGKL MKGR+PLF PCTPK
Sbjct: 101 ILVQLPLPKHINEEKVLSEISIEKDVDGFHPLNIGKLAMKGREPLFLPCTPK 152


>ref|NP_001239823.1| uncharacterized protein LOC100783652 [Glycine max]
           gi|255647576|gb|ACU24251.1| unknown [Glycine max]
          Length = 294

 Score =  196 bits (498), Expect = 2e-48
 Identities = 105/171 (61%), Positives = 118/171 (69%)
 Frame = +2

Query: 44  ATIIDGKAIAHTIRSEIALEVQQLSTKYGKVPGLAVIIVGSRKDSQSYVNMKRKACAEVG 223
           AT+IDGKA+A TIRSEIA EV+QLS KYGKVPGLAV+IVG+RKDSQSYV MKRKACAE+G
Sbjct: 2   ATVIDGKAVAQTIRSEIADEVRQLSQKYGKVPGLAVVIVGNRKDSQSYVGMKRKACAELG 61

Query: 224 IKSYDINLPEQVPEAELIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 403
           IKS+D++LPEQV +AELI++                                        
Sbjct: 62  IKSFDVDLPEQVSQAELIKQ---------------------------VHQLNANPDVHGI 94

Query: 404 XXXLPLPAHINEENVLNEISIEKDVDGFHPLNIGKLGMKGRDPLFQPCTPK 556
              LPLP HINEE VL EIS+EKDVDGFHPLNIGKL MKGRDPLF PCTPK
Sbjct: 95  LVQLPLPKHINEEEVLTEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPK 145


>gb|ABK96126.1| unknown [Populus trichocarpa]
          Length = 299

 Score =  196 bits (497), Expect = 3e-48
 Identities = 108/181 (59%), Positives = 121/181 (66%)
 Frame = +2

Query: 14  MASSEEEQKKATIIDGKAIAHTIRSEIALEVQQLSTKYGKVPGLAVIIVGSRKDSQSYVN 193
           MAS  E   KAT+IDGK IA TIRSEIA EV+QLS KYGKVPGLAV+IVG+RKDSQSYV 
Sbjct: 1   MASQSEH--KATVIDGKLIAQTIRSEIAEEVRQLSEKYGKVPGLAVVIVGNRKDSQSYVG 58

Query: 194 MKRKACAEVGIKSYDINLPEQVPEAELIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 373
           MKRKACAEVGI+S+D++LPEQ+ EAEL+ K                              
Sbjct: 59  MKRKACAEVGIQSFDMDLPEQISEAELVSK---------------------------VHE 91

Query: 374 XXXXXXXXXXXXXLPLPAHINEENVLNEISIEKDVDGFHPLNIGKLGMKGRDPLFQPCTP 553
                        LPLP HINEE VL+EIS+ KDVDGFHPLNIGKL MK R+PLFQPCTP
Sbjct: 92  LNANPDVHGILVQLPLPKHINEEKVLSEISLAKDVDGFHPLNIGKLAMKDREPLFQPCTP 151

Query: 554 K 556
           K
Sbjct: 152 K 152


>ref|XP_004152261.1| PREDICTED: c-1-tetrahydrofolate synthase, cytoplasmic-like [Cucumis
           sativus] gi|449484305|ref|XP_004156845.1| PREDICTED:
           c-1-tetrahydrofolate synthase, cytoplasmic-like [Cucumis
           sativus]
          Length = 299

 Score =  194 bits (494), Expect = 6e-48
 Identities = 106/178 (59%), Positives = 117/178 (65%)
 Frame = +2

Query: 23  SEEEQKKATIIDGKAIAHTIRSEIALEVQQLSTKYGKVPGLAVIIVGSRKDSQSYVNMKR 202
           + E   KATIIDGK IA T+RSEI  EV +LS KYGK+PGLAV+IVG+RKDS +YVNMKR
Sbjct: 2   ASESDHKATIIDGKKIAQTVRSEITEEVNKLSQKYGKIPGLAVVIVGNRKDSLTYVNMKR 61

Query: 203 KACAEVGIKSYDINLPEQVPEAELIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 382
           KAC EVGIKS++I+LPEQV EAELI K                                 
Sbjct: 62  KACLEVGIKSFEIDLPEQVSEAELISK---------------------------VHELNA 94

Query: 383 XXXXXXXXXXLPLPAHINEENVLNEISIEKDVDGFHPLNIGKLGMKGRDPLFQPCTPK 556
                     LPLP HINEE VL+EISIEKDVDGFHPLNIGKL MKGRDPLF PCTPK
Sbjct: 95  NPEVHGILVQLPLPNHINEEKVLSEISIEKDVDGFHPLNIGKLAMKGRDPLFLPCTPK 152


>gb|AAM62762.1| 5,10-methylenetetrahydrofolate
           dehydrogenase:5,10-methenyltetrahydrofolate
           cyclohydrolase, putative [Arabidopsis thaliana]
          Length = 299

 Score =  194 bits (493), Expect = 8e-48
 Identities = 108/181 (59%), Positives = 120/181 (66%)
 Frame = +2

Query: 14  MASSEEEQKKATIIDGKAIAHTIRSEIALEVQQLSTKYGKVPGLAVIIVGSRKDSQSYVN 193
           MASS +   K  IIDGKAIAHTIRSEIA EV+ LS K+GKVPGLAV+IVGSRKDSQ+YVN
Sbjct: 1   MASSSDHTAK--IIDGKAIAHTIRSEIAEEVRGLSEKHGKVPGLAVVIVGSRKDSQTYVN 58

Query: 194 MKRKACAEVGIKSYDINLPEQVPEAELIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 373
            KRKACAEVGIKS+D+ LPE+V EA+LI K                              
Sbjct: 59  TKRKACAEVGIKSFDVGLPEEVSEADLISK---------------------------VHE 91

Query: 374 XXXXXXXXXXXXXLPLPAHINEENVLNEISIEKDVDGFHPLNIGKLGMKGRDPLFQPCTP 553
                        LPLP HINEEN+L  ISI+KDVDGFHPLNIGKL MKGR+PLF PCTP
Sbjct: 92  LNSNPDVHGILVQLPLPKHINEENILGAISIDKDVDGFHPLNIGKLAMKGREPLFLPCTP 151

Query: 554 K 556
           K
Sbjct: 152 K 152


Top