BLASTX nr result

ID: Coptis21_contig00002281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002281
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF02555.1| hypothetical protein [Nicotiana benthamiana]           77   2e-12
ref|XP_003554227.1| PREDICTED: disease resistance response prote...    73   2e-11
ref|XP_002276741.2| PREDICTED: disease resistance response prote...    73   3e-11
ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
gb|ABK93789.1| unknown [Populus trichocarpa]                           72   5e-11

>dbj|BAF02555.1| hypothetical protein [Nicotiana benthamiana]
          Length = 194

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/58 (58%), Positives = 46/58 (79%)
 Frame = +1

Query: 46  LGLGKEKVTRLHFYYHVVVSGKKPSSMVIAQANSTNNSPYGFGLLFMADDTLTVGPEL 219
           L   K K+T+LHFY+H +VSGK P+++ IAQANST++SP  FGLL + DD LT+GPE+
Sbjct: 41  LSHAKPKITKLHFYFHDIVSGKNPTAIPIAQANSTSHSPSSFGLLAVLDDRLTIGPEI 98


>ref|XP_003554227.1| PREDICTED: disease resistance response protein 206-like [Glycine
           max]
          Length = 183

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/57 (59%), Positives = 45/57 (78%)
 Frame = +1

Query: 46  LGLGKEKVTRLHFYYHVVVSGKKPSSMVIAQANSTNNSPYGFGLLFMADDTLTVGPE 216
           LG+ KEK++ LHF++H +VSG KP+++ +AQA+ TN S   FGLL MADD LTVGPE
Sbjct: 30  LGVQKEKLSHLHFFFHDIVSGPKPTAVRVAQAHMTNTSSTLFGLLMMADDPLTVGPE 86


>ref|XP_002276741.2| PREDICTED: disease resistance response protein 206-like [Vitis
           vinifera]
          Length = 169

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/60 (60%), Positives = 41/60 (68%)
 Frame = +1

Query: 43  NLGLGKEKVTRLHFYYHVVVSGKKPSSMVIAQANSTNNSPYGFGLLFMADDTLTVGPELT 222
           NL   KE+ TRLHFY+H   SGK PS+  +AQA STN SP  FGL+ M DD LT GPE T
Sbjct: 15  NLQHAKERTTRLHFYFHDTTSGKNPSARRVAQAPSTNKSPTFFGLINMMDDPLTEGPEAT 74


>ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|222867969|gb|EEF05100.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/59 (55%), Positives = 46/59 (77%)
 Frame = +1

Query: 46  LGLGKEKVTRLHFYYHVVVSGKKPSSMVIAQANSTNNSPYGFGLLFMADDTLTVGPELT 222
           LGL KEK++ LHFY+H +VSGK P+++ IA+A+ TN S  GFG++ M DD LT+ PEL+
Sbjct: 25  LGLKKEKLSHLHFYFHDIVSGKNPTAVRIARADMTNTSSTGFGMVAMIDDPLTMTPELS 83


>gb|ABK93789.1| unknown [Populus trichocarpa]
          Length = 194

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/59 (55%), Positives = 46/59 (77%)
 Frame = +1

Query: 46  LGLGKEKVTRLHFYYHVVVSGKKPSSMVIAQANSTNNSPYGFGLLFMADDTLTVGPELT 222
           LGL KEK++ LHFY+H +VSGK P+++ IA+A+ TN S  GFG++ M DD LT+ PEL+
Sbjct: 41  LGLKKEKLSHLHFYFHDIVSGKNPTAVRIARADMTNTSSTGFGMVAMIDDPLTMTPELS 99


Top