BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002273
         (1481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   675   0.0  
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              675   0.0  
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   674   0.0  
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   652   0.0  
ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|3555...   649   0.0  

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  675 bits (1741), Expect = 0.0
 Identities = 333/457 (72%), Positives = 381/457 (83%), Gaps = 1/457 (0%)
 Frame = -1

Query: 1481 VIQEVNKKYSCLEIDLDGXXXXXXXXXXXXXXXXXVQFKDGTPYEIIERKGLDIVRRDWS 1302
            VIQEVNKKY CLEIDLDG                 +QFKDGTPYE+IERKGLD+VRRDWS
Sbjct: 1070 VIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWS 1129

Query: 1301 LLSKDLGDFCLSQILSGGSCEDVVESIHSSLMQVQEEMRNGEIALEKYVITKTLTKPPEA 1122
            LLSK+LGDF LSQILSGGSCEDVVESIH+SLM+VQE+MRNGE+ALEKY+ITK+LTKPPEA
Sbjct: 1130 LLSKELGDFSLSQILSGGSCEDVVESIHNSLMKVQEDMRNGEVALEKYIITKSLTKPPEA 1189

Query: 1121 YPDAKNQPHVQVALRLKEAGYSSGFSAGDTVPYVICCEQGTSSGSSTGIAQRARHPDELE 942
            YPD KNQPHVQVALRLK++GYS+G SAGDTVPY+ICCEQGTSSGSSTGIAQRARHPDEL+
Sbjct: 1190 YPD-KNQPHVQVALRLKQSGYSTGCSAGDTVPYIICCEQGTSSGSSTGIAQRARHPDELK 1248

Query: 941  KERGNLMVDIEYYLSQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKTTDAVTNDP 762
            ++ G  M+DI+YYL+QQIHPVVSRLCASI+GTSPARLADCLGLDSSKFQS+ ++A+ ND 
Sbjct: 1249 RDNGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPARLADCLGLDSSKFQSRRSEAINNDF 1308

Query: 761  SASLLSAVDDDERYRGCEPLWLSCP-CSCTFECPXXXXXXXXXXXXXXXXLQAKESSHNF 585
            S SLLSA  D+ERYRGCE L LSCP C  TF+CP                +Q +ES+ NF
Sbjct: 1309 SISLLSA--DEERYRGCEHLILSCPSCFGTFDCPTLFNSVHTSITEKSTQVQVEESN-NF 1365

Query: 584  WHTLHCPKCPDDSDGGRITAVMIANQVKRQVDGFISMYYKGIMTCDDETCNFTSRSLNMR 405
            W  L CPKCP++ D GR++  +IANQVKRQ DGFISMYYKG M CDDETC  T+ SLN+R
Sbjct: 1366 WQRLRCPKCPEEGDVGRMSPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNSLNLR 1425

Query: 404  VIGESERGTVCPNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLKIPLEK 225
            VIG+SERGTVCPNYPRCNG LVRKYTE DLYKQLSYFCHVLD VR IEK+++  +IP+EK
Sbjct: 1426 VIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEK 1485

Query: 224  DLARIRLLVDLAASVVQKIRDRCAYGWIQMKDLTVSV 114
            +LARIR LV+LAAS  QKIRDRCAYGW+Q+ DLTV+V
Sbjct: 1486 ELARIRPLVNLAASTTQKIRDRCAYGWVQLDDLTVTV 1522


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  675 bits (1741), Expect = 0.0
 Identities = 333/457 (72%), Positives = 381/457 (83%), Gaps = 1/457 (0%)
 Frame = -1

Query: 1481 VIQEVNKKYSCLEIDLDGXXXXXXXXXXXXXXXXXVQFKDGTPYEIIERKGLDIVRRDWS 1302
            VIQEVNKKY CLEIDLDG                 +QFKDGTPYE+IERKGLD+VRRDWS
Sbjct: 1109 VIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWS 1168

Query: 1301 LLSKDLGDFCLSQILSGGSCEDVVESIHSSLMQVQEEMRNGEIALEKYVITKTLTKPPEA 1122
            LLSK+LGDF LSQILSGGSCEDVVESIH+SLM+VQE+MRNGE+ALEKY+ITK+LTKPPEA
Sbjct: 1169 LLSKELGDFSLSQILSGGSCEDVVESIHNSLMKVQEDMRNGEVALEKYIITKSLTKPPEA 1228

Query: 1121 YPDAKNQPHVQVALRLKEAGYSSGFSAGDTVPYVICCEQGTSSGSSTGIAQRARHPDELE 942
            YPD KNQPHVQVALRLK++GYS+G SAGDTVPY+ICCEQGTSSGSSTGIAQRARHPDEL+
Sbjct: 1229 YPD-KNQPHVQVALRLKQSGYSTGCSAGDTVPYIICCEQGTSSGSSTGIAQRARHPDELK 1287

Query: 941  KERGNLMVDIEYYLSQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKTTDAVTNDP 762
            ++ G  M+DI+YYL+QQIHPVVSRLCASI+GTSPARLADCLGLDSSKFQS+ ++A+ ND 
Sbjct: 1288 RDNGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPARLADCLGLDSSKFQSRRSEAINNDF 1347

Query: 761  SASLLSAVDDDERYRGCEPLWLSCP-CSCTFECPXXXXXXXXXXXXXXXXLQAKESSHNF 585
            S SLLSA  D+ERYRGCE L LSCP C  TF+CP                +Q +ES+ NF
Sbjct: 1348 SISLLSA--DEERYRGCEHLILSCPSCFGTFDCPTLFNSVHTSITEKSTQVQVEESN-NF 1404

Query: 584  WHTLHCPKCPDDSDGGRITAVMIANQVKRQVDGFISMYYKGIMTCDDETCNFTSRSLNMR 405
            W  L CPKCP++ D GR++  +IANQVKRQ DGFISMYYKG M CDDETC  T+ SLN+R
Sbjct: 1405 WQRLRCPKCPEEGDVGRMSPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNSLNLR 1464

Query: 404  VIGESERGTVCPNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLKIPLEK 225
            VIG+SERGTVCPNYPRCNG LVRKYTE DLYKQLSYFCHVLD VR IEK+++  +IP+EK
Sbjct: 1465 VIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEK 1524

Query: 224  DLARIRLLVDLAASVVQKIRDRCAYGWIQMKDLTVSV 114
            +LARIR LV+LAAS  QKIRDRCAYGW+Q+ DLTV+V
Sbjct: 1525 ELARIRPLVNLAASTTQKIRDRCAYGWVQLDDLTVTV 1561


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  674 bits (1740), Expect = 0.0
 Identities = 321/457 (70%), Positives = 379/457 (82%), Gaps = 1/457 (0%)
 Frame = -1

Query: 1481 VIQEVNKKYSCLEIDLDGXXXXXXXXXXXXXXXXXVQFKDGTPYEIIERKGLDIVRRDWS 1302
            VIQEVNKKY CLEIDLDG                 +QFKDGTPYE+IERKGLD+VRRDWS
Sbjct: 1070 VIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWS 1129

Query: 1301 LLSKDLGDFCLSQILSGGSCEDVVESIHSSLMQVQEEMRNGEIALEKYVITKTLTKPPEA 1122
            LLSK+LGDFCL+QILSGGSCEDVVESIH+SLM+VQEEMRNG++ALEKY+ITKTLTKPPEA
Sbjct: 1130 LLSKELGDFCLAQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYIITKTLTKPPEA 1189

Query: 1121 YPDAKNQPHVQVALRLKEAGYSSGFSAGDTVPYVICCEQGTSSGSSTGIAQRARHPDELE 942
            YPDAKNQPHV VALRLK++GY++G S GDTVPY+ICCEQG + GSS+GIAQRARHPDEL+
Sbjct: 1190 YPDAKNQPHVMVALRLKQSGYTTGCSVGDTVPYIICCEQGATPGSSSGIAQRARHPDELK 1249

Query: 941  KERGNLMVDIEYYLSQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKTTDAVTNDP 762
            K+ G  M+DI+YYLSQQIHPVVSRLCASI+GTSP RLADCLGLDSSKFQ K+++A+ NDP
Sbjct: 1250 KDDGKWMIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQIKSSEAINNDP 1309

Query: 761  SASLLSAVDDDERYRGCEPLWLSCP-CSCTFECPXXXXXXXXXXXXXXXXLQAKESSHNF 585
            ++SLL AV+D+ERYR CEPL LSCP CS TFECP                LQ +ES  NF
Sbjct: 1310 ASSLLFAVNDEERYRSCEPLLLSCPSCSGTFECPAVFGSICTSISANPTKLQVEESVSNF 1369

Query: 584  WHTLHCPKCPDDSDGGRITAVMIANQVKRQVDGFISMYYKGIMTCDDETCNFTSRSLNMR 405
            W  + CPKCP++ D GRI+  M+ANQVKRQ +GF+SMYYKG+MTCDDETC   +RSLN+R
Sbjct: 1370 WCRMRCPKCPEEGDTGRISPAMLANQVKRQAEGFVSMYYKGLMTCDDETCKHITRSLNLR 1429

Query: 404  VIGESERGTVCPNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLKIPLEK 225
            +IG+SERGTVCPNYPRCNG LVRKYTE +LYKQLS++C++LD VR +EK+D   +I LEK
Sbjct: 1430 LIGDSERGTVCPNYPRCNGRLVRKYTEAELYKQLSFYCYLLDTVRCMEKMDAGTRISLEK 1489

Query: 224  DLARIRLLVDLAASVVQKIRDRCAYGWIQMKDLTVSV 114
             + +IR +VDLA S VQKIRDRCAYGW+Q+ DL+V+V
Sbjct: 1490 KITKIRPMVDLAVSTVQKIRDRCAYGWVQLSDLSVTV 1526


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  652 bits (1683), Expect = 0.0
 Identities = 312/456 (68%), Positives = 375/456 (82%), Gaps = 1/456 (0%)
 Frame = -1

Query: 1481 VIQEVNKKYSCLEIDLDGXXXXXXXXXXXXXXXXXVQFKDGTPYEIIERKGLDIVRRDWS 1302
            VIQEVNKKY CLEIDLDG                 VQFKDG PYE+IE+KGLD+VRRDWS
Sbjct: 1106 VIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGKPYEVIEKKGLDMVRRDWS 1165

Query: 1301 LLSKDLGDFCLSQILSGGSCEDVVESIHSSLMQVQEEMRNGEIALEKYVITKTLTKPPEA 1122
            LLSK+LGDFCLSQILSGGSCEDV+ESIH++LM+VQE+MR G+I LEKYVITK+LTKPPEA
Sbjct: 1166 LLSKELGDFCLSQILSGGSCEDVIESIHNALMKVQEQMRTGQIELEKYVITKSLTKPPEA 1225

Query: 1121 YPDAKNQPHVQVALRLKEAGYSSGFSAGDTVPYVICCEQGTSSGSSTGIAQRARHPDELE 942
            YPDAK+QPHV+VALRLK++GY +G SAGDTVPYVICCEQG  S +S GIAQRARHPDEL+
Sbjct: 1226 YPDAKSQPHVEVALRLKKSGYVTGCSAGDTVPYVICCEQGNGSTTSVGIAQRARHPDELK 1285

Query: 941  KERGNLMVDIEYYLSQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKTTDAVTNDP 762
            ++ GN +VDI+YYL+QQIHPV+SRLCASI+GTSPARLADCLGLDSSKFQ+K+++AV +DP
Sbjct: 1286 RDNGNWIVDIDYYLAQQIHPVISRLCASIQGTSPARLADCLGLDSSKFQNKSSEAVNDDP 1345

Query: 761  SASLLSAVDDDERYRGCEPLWLSCP-CSCTFECPXXXXXXXXXXXXXXXXLQAKESSHNF 585
            S +LL   DD+ER+RGCEPL L+CP CSC+FEC                 LQ  ES+   
Sbjct: 1346 SNALLCVADDEERFRGCEPLTLTCPSCSCSFECAPIFSSICSSIRQNPADLQVGESASKV 1405

Query: 584  WHTLHCPKCPDDSDGGRITAVMIANQVKRQVDGFISMYYKGIMTCDDETCNFTSRSLNMR 405
            W    CPKCP++S+ G I++ +IANQVKRQV+GFIS YYKG+M CDDETCN+T+RSLN+R
Sbjct: 1406 WERFSCPKCPEESE-GNISSALIANQVKRQVEGFISTYYKGVMMCDDETCNYTTRSLNLR 1464

Query: 404  VIGESERGTVCPNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLKIPLEK 225
            VIG+SERGTVCPNYPRCNGHL+R+YTE DLYKQL+YFC VLD VR IEK++  +++ +EK
Sbjct: 1465 VIGDSERGTVCPNYPRCNGHLLRQYTEADLYKQLAYFCFVLDTVRCIEKVESNMRLQVEK 1524

Query: 224  DLARIRLLVDLAASVVQKIRDRCAYGWIQMKDLTVS 117
            +L RIR +V+ AAS V+K RDRCAY W+Q+KDL VS
Sbjct: 1525 ELVRIRPVVEAAASTVEKFRDRCAYSWVQLKDLIVS 1560


>ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|355513051|gb|AES94674.1| DNA
            polymerase [Medicago truncatula]
          Length = 611

 Score =  649 bits (1673), Expect = 0.0
 Identities = 313/457 (68%), Positives = 373/457 (81%), Gaps = 1/457 (0%)
 Frame = -1

Query: 1481 VIQEVNKKYSCLEIDLDGXXXXXXXXXXXXXXXXXVQFKDGTPYEIIERKGLDIVRRDWS 1302
            VIQEVNKKY CLEIDLDG                 VQFKDGTPYE+IERKGLDIVRRDWS
Sbjct: 157  VIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDIVRRDWS 216

Query: 1301 LLSKDLGDFCLSQILSGGSCEDVVESIHSSLMQVQEEMRNGEIALEKYVITKTLTKPPEA 1122
            LL+KDLGDFCL+QILSGGSCEDVVESIH+SLM+VQEEMRNG++ALEKYVITKTLTKPPEA
Sbjct: 217  LLAKDLGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEA 276

Query: 1121 YPDAKNQPHVQVALRLKEAGYSSGFSAGDTVPYVICCEQGTSSGSSTGIAQRARHPDELE 942
            YPDAKNQPHV VA RLK+ GY+SG S GDT+PYVICCEQG SSGS+TGIA RARHPDEL+
Sbjct: 277  YPDAKNQPHVLVAQRLKQQGYTSGCSVGDTIPYVICCEQGGSSGSATGIALRARHPDELK 336

Query: 941  KERGNLMVDIEYYLSQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKTTDAVTNDP 762
            +E+G  ++DI+YYLSQQIHPV+SRLCASI+GTSP RLADCLGLD+SKFQ K+++A ++DP
Sbjct: 337  QEQGTWLIDIDYYLSQQIHPVISRLCASIQGTSPERLADCLGLDTSKFQHKSSEA-SDDP 395

Query: 761  SASLLSAVDDDERYRGCEPLWLSCP-CSCTFECPXXXXXXXXXXXXXXXXLQAKESSHNF 585
            ++SLL A DD+ERYRGCE L LSCP CS  F+CP                    ES +NF
Sbjct: 396  TSSLLFAGDDEERYRGCESLVLSCPSCSSVFDCPPVFKSICMLGNEKPTSSGTDESDYNF 455

Query: 584  WHTLHCPKCPDDSDGGRITAVMIANQVKRQVDGFISMYYKGIMTCDDETCNFTSRSLNMR 405
            W  L CPKC  ++  GRI+A MIANQVKRQ + F+ MYY+G++ CDDETC  T+RS++ R
Sbjct: 456  WRKLCCPKC-FENGAGRISAAMIANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSVSFR 514

Query: 404  VIGESERGTVCPNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLKIPLEK 225
            ++G+SERGTVCPNYPRCNGHL RKYTE DLYKQLSYFCHV D V +IEK++ K +IP+EK
Sbjct: 515  LVGDSERGTVCPNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVCYIEKMEAKSRIPIEK 574

Query: 224  DLARIRLLVDLAASVVQKIRDRCAYGWIQMKDLTVSV 114
            +L +IR +VDLAAS +QKIRDRCA+GW++++DL V++
Sbjct: 575  ELIKIRPIVDLAASTIQKIRDRCAFGWVKLQDLVVAI 611