BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002272
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...   316   8e-84
emb|CAN65165.1| hypothetical protein VITISV_002615 [Vitis vinifera]   314   3e-83
ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   301   2e-79
ref|XP_002328702.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...   292   1e-76

>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
            gi|297739540|emb|CBI29722.3| unnamed protein product
            [Vitis vinifera]
          Length = 1458

 Score =  316 bits (809), Expect = 8e-84
 Identities = 163/245 (66%), Positives = 193/245 (78%), Gaps = 2/245 (0%)
 Frame = -2

Query: 1193 KWAKILHEKGAKAAQXXXXXXXXXXSVMYMIRDMRIQFGSLLADIGFINLPKTFKTGNMK 1014
            KW +ILHEKGAKAAQ          SVM+MIRDMR+QFG+LLADIG I+LPK ++    K
Sbjct: 1205 KWERILHEKGAKAAQHFCNSYFLSSSVMHMIRDMRVQFGNLLADIGLISLPKKYQIERKK 1264

Query: 1013 -DKLDHWFSDMTQSFNKYSHYSSVVKSILCAGLYPNVAVTADGIVDVEFCRNLNSSSRSA 837
             + L+ WFSD++Q FN YSH+ S+VK+ILCAGLYPNVA T  GI  V    N+  SS SA
Sbjct: 1265 KENLNSWFSDISQPFNTYSHHFSIVKAILCAGLYPNVAATEQGIAGVAL-GNIIQSSGSA 1323

Query: 836  GKGNLNWYDRRTKVQIHPSSVNCNLKAVQYPFLVYLEKVETSSVFLRDTSVISPYSILLF 657
             KG   WYD R +V IHPSS+N NL A QYPFLV+LEKVET+ VFLRDT++ISPYSILLF
Sbjct: 1324 TKGRPVWYDGRREVHIHPSSINGNLNAFQYPFLVFLEKVETNKVFLRDTTIISPYSILLF 1383

Query: 656  GGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVLKELIKKPEKA-TVENEVI 480
            GGSINV HQ+G++ IDGW+KL APAQIAVLFKELR+TLHSVLKELI+KPEKA  V NEV+
Sbjct: 1384 GGSINVQHQSGMVNIDGWLKLAAPAQIAVLFKELRVTLHSVLKELIRKPEKAIVVNNEVV 1443

Query: 479  RSIVH 465
            +SI+H
Sbjct: 1444 KSIIH 1448


>emb|CAN65165.1| hypothetical protein VITISV_002615 [Vitis vinifera]
          Length = 260

 Score =  314 bits (804), Expect = 3e-83
 Identities = 162/245 (66%), Positives = 192/245 (78%), Gaps = 2/245 (0%)
 Frame = -2

Query: 1193 KWAKILHEKGAKAAQXXXXXXXXXXSVMYMIRDMRIQFGSLLADIGFINLPKTFKTGNMK 1014
            KW +ILHEKGAKAAQ          SVM+MIRDMR+QFG+LLADIG I+LPK ++    K
Sbjct: 7    KWERILHEKGAKAAQHFCNSYFLSSSVMHMIRDMRVQFGNLLADIGLISLPKKYQIERKK 66

Query: 1013 -DKLDHWFSDMTQSFNKYSHYSSVVKSILCAGLYPNVAVTADGIVDVEFCRNLNSSSRSA 837
             + L+ WFSD++Q FN YSH+ S+VK+ILCAGLYPNVA T  GI       N+  SS SA
Sbjct: 67   KENLNSWFSDISQPFNTYSHHFSIVKAILCAGLYPNVAATEQGIAGXAL-GNIIQSSGSA 125

Query: 836  GKGNLNWYDRRTKVQIHPSSVNCNLKAVQYPFLVYLEKVETSSVFLRDTSVISPYSILLF 657
             KG   WYD R +V IHPSS+N NL A QYPFLV+LEKVET+ VFLRDT++ISPYSILLF
Sbjct: 126  TKGRPVWYDGRREVHIHPSSINGNLNAFQYPFLVFLEKVETNKVFLRDTTIISPYSILLF 185

Query: 656  GGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVLKELIKKPEKA-TVENEVI 480
            GGSINV HQ+G++ IDGW+KL APAQIAVLFKELR+TLHSVLKELI+KPEKA  V NEV+
Sbjct: 186  GGSINVQHQSGMVNIDGWLKLAAPAQIAVLFKELRVTLHSVLKELIRKPEKAIVVNNEVV 245

Query: 479  RSIVH 465
            +SI+H
Sbjct: 246  KSIIH 250


>ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
          Length = 1528

 Score =  301 bits (771), Expect = 2e-79
 Identities = 158/244 (64%), Positives = 186/244 (76%), Gaps = 2/244 (0%)
 Frame = -2

Query: 1193 KWAKILHEKGAKAAQXXXXXXXXXXSVMYMIRDMRIQFGSLLADIGFINLPKTFKTGNMK 1014
            +W +IL EKGAKAAQ          SVM+MIR+MR+QFG+LLADIG I LPK ++    K
Sbjct: 1275 RWERILTEKGAKAAQKFCNSFFLSCSVMFMIREMRVQFGTLLADIGLITLPKDYQKNAKK 1334

Query: 1013 -DKLDHWFSDMTQSFNKYSHYSSVVKSILCAGLYPNVAVTADGIVDVEFCRNLNSSSRSA 837
               LD W SD++Q FN Y+H+SS++K+ILCAGLYPNVA    GIV      +L  SS SA
Sbjct: 1335 IGSLDSWLSDVSQPFNIYAHHSSILKAILCAGLYPNVAAGEQGIV-AAVLSSLKQSSSSA 1393

Query: 836  GKGNLNWYDRRTKVQIHPSSVNCNLKAVQYPFLVYLEKVETSSVFLRDTSVISPYSILLF 657
              G   W+D R +V IHPSS+N N K  QYPFLV+LEKVET+ VFLRDTSVISPYSILLF
Sbjct: 1394 SSGRTVWFDGRREVHIHPSSINNNSKGFQYPFLVFLEKVETNKVFLRDTSVISPYSILLF 1453

Query: 656  GGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVLKELIKKPEKATV-ENEVI 480
            GGSI+VLHQTG L IDGW+KLTAPAQIAVLFKELRL LHS+LKELI+KPE ATV  NE+I
Sbjct: 1454 GGSIDVLHQTGQLIIDGWLKLTAPAQIAVLFKELRLALHSILKELIRKPENATVLNNEII 1513

Query: 479  RSIV 468
            +SI+
Sbjct: 1514 KSII 1517


>ref|XP_002328702.1| predicted protein [Populus trichocarpa] gi|222839000|gb|EEE77351.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  298 bits (764), Expect = 1e-78
 Identities = 154/244 (63%), Positives = 187/244 (76%), Gaps = 2/244 (0%)
 Frame = -2

Query: 1193 KWAKILHEKGAKAAQXXXXXXXXXXSVMYMIRDMRIQFGSLLADIGFINLPKTFKTGNMK 1014
            KW KIL E+G KAAQ          SVM+MIRDMR QFG+LLADIG I++PK+++ G MK
Sbjct: 73   KWEKILSERGFKAAQQFCATYFLSSSVMHMIRDMRTQFGTLLADIGLISIPKSYQVGRMK 132

Query: 1013 -DKLDHWFSDMTQSFNKYSHYSSVVKSILCAGLYPNVAVTADGIVDVEFCRNLNSSSRSA 837
             + LD W S+ +Q FN YSH+SS+VK+ILCAGLYPNVA T  GI        L  SSR  
Sbjct: 133  KENLDSWLSEKSQPFNMYSHHSSLVKAILCAGLYPNVAATELGITAATL-NGLKQSSRPG 191

Query: 836  GKGNLNWYDRRTKVQIHPSSVNCNLKAVQYPFLVYLEKVETSSVFLRDTSVISPYSILLF 657
             K +  WYD R +V IHPSSVNCN+KA  +PFLV+LEKVET+ VFLRDT++ISP+SILLF
Sbjct: 192  KKDHPIWYDGRREVHIHPSSVNCNMKAFPHPFLVFLEKVETNKVFLRDTTIISPFSILLF 251

Query: 656  GGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVLKELIKKPEKAT-VENEVI 480
            GG IN+ HQTGLLTIDGW+KL A AQ AVLFKELR TLH++LKELI+KPE AT V+NEV+
Sbjct: 252  GGEINIQHQTGLLTIDGWLKLKASAQYAVLFKELRSTLHALLKELIRKPENATLVDNEVV 311

Query: 479  RSIV 468
            +S++
Sbjct: 312  KSMI 315


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1509

 Score =  292 bits (748), Expect = 1e-76
 Identities = 150/239 (62%), Positives = 182/239 (76%), Gaps = 2/239 (0%)
 Frame = -2

Query: 1193 KWAKILHEKGAKAAQXXXXXXXXXXSVMYMIRDMRIQFGSLLADIGFINLPKTFKT-GNM 1017
            KW  ILHEKG KAAQ          SVM+MIRDMRIQFG+LLADIGFINLP+ ++  G  
Sbjct: 1204 KWDNILHEKGVKAAQQFCSTYFLSNSVMHMIRDMRIQFGTLLADIGFINLPQNYQILGRN 1263

Query: 1016 KDKLDHWFSDMTQSFNKYSHYSSVVKSILCAGLYPNVAVTADGIVDVEFCRNLNSSSRSA 837
            K+K D W SD +Q FN YSH+SS+VK+ILCAGLYPNVA T  GI+      +L  S+  A
Sbjct: 1264 KEKFDGWLSDKSQPFNTYSHHSSIVKAILCAGLYPNVAATQQGIIATAI-NSLKQSTIPA 1322

Query: 836  GKGNLNWYDRRTKVQIHPSSVNCNLKAVQYPFLVYLEKVETSSVFLRDTSVISPYSILLF 657
             KG   WYD R +V IHPSS+N  +KA Q+PFLV+LEKVET+ VFLRDT++ISP+SILLF
Sbjct: 1323 IKGYPVWYDGRREVHIHPSSINSKVKAFQHPFLVFLEKVETNKVFLRDTTIISPFSILLF 1382

Query: 656  GGSINVLHQTGLLTIDGWIKLTAPAQIAVLFKELRLTLHSVLKELIKKPEKAT-VENEV 483
            GG INV HQTGL+T+DGW+KLTAPAQ AVLFKE R  +HS+LKEL++KP+ A  V+NE+
Sbjct: 1383 GGFINVQHQTGLVTVDGWLKLTAPAQYAVLFKEFRSAMHSLLKELVQKPKNAAIVDNEM 1441