BLASTX nr result

ID: Coptis21_contig00002267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002267
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269300.1| PREDICTED: light-regulated protein [Vitis vi...   146   6e-33
ref|XP_004170126.1| PREDICTED: LOW QUALITY PROTEIN: light-regula...   140   4e-31
ref|XP_004140555.1| PREDICTED: light-regulated protein-like [Cuc...   139   7e-31
gb|AFK49621.1| unknown [Lotus japonicus]                              131   2e-28
gb|ACV71021.1| UPA22 [Capsicum annuum]                                129   8e-28

>ref|XP_002269300.1| PREDICTED: light-regulated protein [Vitis vinifera]
           gi|296088179|emb|CBI35671.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  146 bits (368), Expect = 6e-33
 Identities = 76/139 (54%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
 Frame = -3

Query: 594 MQAAFCFAQXXXXXXXXXXXTRWLRSP-SKIDTILLRRHPASTKVMAIPSENSTVDYTSK 418
           MQAA CF +              L++P SK+ T       A++K+   PS   TVDY+S 
Sbjct: 1   MQAALCFPRSTLPLLTPTKPFSSLKNPISKLQTSPFPPLRATSKLQETPS---TVDYSST 57

Query: 417 TSVFPAEACETIGGEACDAEIYPETTLKPEDTSIKGKTTQESVDREYLEYEDQKTVFPGE 238
           TSVFPAEACE +GGEACDAE+YPE  LK E  +   ++  E VDREYLEY   KTVFPGE
Sbjct: 58  TSVFPAEACEVVGGEACDAEMYPEVKLKAEAGNPPARSATEGVDREYLEYNSPKTVFPGE 117

Query: 237 ACDDLGGEFCQPEYQKGVY 181
           ACDDLGGEFC+PEYQ+GV+
Sbjct: 118 ACDDLGGEFCEPEYQEGVF 136


>ref|XP_004170126.1| PREDICTED: LOW QUALITY PROTEIN: light-regulated protein-like
           [Cucumis sativus]
          Length = 137

 Score =  140 bits (352), Expect = 4e-31
 Identities = 64/96 (66%), Positives = 76/96 (79%)
 Frame = -3

Query: 468 KVMAIPSENSTVDYTSKTSVFPAEACETIGGEACDAEIYPETTLKPEDTSIKGKTTQESV 289
           K  A+  + STVDY+S +SVFPAEAC+T+GGEACD E+YPE  LKPE  + KG +  E V
Sbjct: 44  KASAVGQDPSTVDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPE--AXKGNSVTEPV 101

Query: 288 DREYLEYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 181
           +REYL+Y+  KTVFP EACDDLGGEFC PEYQKGVY
Sbjct: 102 EREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137


>ref|XP_004140555.1| PREDICTED: light-regulated protein-like [Cucumis sativus]
           gi|493636|dbj|BAA06153.1| CR9 [Cucumis sativus]
           gi|322505875|emb|CBZ13178.1| putative
           cytokinin-repressed protein [Cucumis sativus]
           gi|746031|prf||2016504A cytokinin-repressed protein CR9
          Length = 137

 Score =  139 bits (350), Expect = 7e-31
 Identities = 64/96 (66%), Positives = 76/96 (79%)
 Frame = -3

Query: 468 KVMAIPSENSTVDYTSKTSVFPAEACETIGGEACDAEIYPETTLKPEDTSIKGKTTQESV 289
           K  A+  + STVDY+S +SVFPAEAC+T+GGEACD E+YPE  LKPE  + KG +  E V
Sbjct: 44  KASAVGQDPSTVDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPE--AKKGNSVTEPV 101

Query: 288 DREYLEYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 181
           +REYL+Y+  KTVFP EACDDLGGEFC PEYQKGVY
Sbjct: 102 EREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137


>gb|AFK49621.1| unknown [Lotus japonicus]
          Length = 140

 Score =  131 bits (329), Expect = 2e-28
 Identities = 65/112 (58%), Positives = 77/112 (68%)
 Frame = -3

Query: 516 PSKIDTILLRRHPASTKVMAIPSENSTVDYTSKTSVFPAEACETIGGEACDAEIYPETTL 337
           P+K+   L      + KV  +  + STVDYTS  SVFP EACETIGG+AC AE+YPE  L
Sbjct: 29  PAKLTGSLAPPRFTAIKVATVNYDTSTVDYTSAFSVFPVEACETIGGDACLAEMYPEVKL 88

Query: 336 KPEDTSIKGKTTQESVDREYLEYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 181
           KPE  +   +   E+V+REYLEY D KTVF  EACDDLGG FC+ EYQKGVY
Sbjct: 89  KPEARNNTPRDASENVEREYLEYNDPKTVFQAEACDDLGGIFCELEYQKGVY 140


>gb|ACV71021.1| UPA22 [Capsicum annuum]
          Length = 140

 Score =  129 bits (324), Expect = 8e-28
 Identities = 68/113 (60%), Positives = 80/113 (70%), Gaps = 4/113 (3%)
 Frame = -3

Query: 507 IDTILLRRHPASTKVMAIPSEN---STVDYTSKTS-VFPAEACETIGGEACDAEIYPETT 340
           I + L   H     + A P+ N   STVDY+S TS VFPAEACETIGGEACD E+YPET 
Sbjct: 29  ISSNLKTNHSTCPPIRATPAANDTSSTVDYSSMTSSVFPAEACETIGGEACDVEMYPETK 88

Query: 339 LKPEDTSIKGKTTQESVDREYLEYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 181
            K  + + K + + ESVDREYLEY + KTVF GEACDDLGG+FC+ EYQ GVY
Sbjct: 89  PKSAENTTKTQVS-ESVDREYLEYNEPKTVFLGEACDDLGGKFCEAEYQNGVY 140


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