BLASTX nr result

ID: Coptis21_contig00002257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002257
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis...   298   4e-78
gb|AAY28930.1| sucrose responsive element binding protein [Vitis...   296   8e-78
gb|AFH03065.1| R2R3-MYB transcription factor MYB13 [Epimedium sa...   292   1e-76
ref|NP_001235142.1| MYB transcription factor MYB112 [Glycine max...   285   3e-74
ref|XP_002310702.1| predicted protein [Populus trichocarpa] gi|2...   279   1e-72

>ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis vinifera]
          Length = 312

 Score =  298 bits (762), Expect = 4e-78
 Identities = 183/356 (51%), Positives = 218/356 (61%), Gaps = 4/356 (1%)
 Frame = -1

Query: 1453 MGSLRRDSDKIKGPWSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSP 1274
            M + R+D D+IKGPWSPEED++L KLV+KHG RNWS+ISKSIPGRSGKSCRLRWCNQLSP
Sbjct: 1    MAATRKDVDRIKGPWSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 60

Query: 1273 QVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCCSMIEDG 1094
            QVEHRAFTSEED+TIMRAH++FGNKWATIARLLSGRTDNAIKNHWNSTLKRKC ++ EDG
Sbjct: 61   QVEHRAFTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSAITEDG 120

Query: 1093 NSNDGFGFEEDRRRQPALKRSASAGASIPGYGGGVYFXXXXXXXXXXXXXXXXXXXXXXX 914
            +      F  D    P LKRS SAGA+ P    G+Y                        
Sbjct: 121  S------FGGDYPPHP-LKRSVSAGAAAP--VSGLYL--SPSSPCGSDVSDSSLPVVSSS 169

Query: 913  HVFRPVARSGAILPPHHPIETSPKPVAPFAKPIDPPTSLSLSLPGIAATESSSVRHKHSQ 734
            HV+RPVAR+G I+PP    ET+       +   DPPTSLSLSLPG+ + E S+   + + 
Sbjct: 170  HVYRPVARTGGIIPP----ETT-------SSSNDPPTSLSLSLPGVDSCEVSNRAPEPNH 218

Query: 733  SLPT---ALLPPNFPF-PVSTNQSNQQDQYTAFLRXXXXXXXXXXXXXXXXXXXXXXXXX 566
            + P     ++P   P   +  +Q NQ     A +                          
Sbjct: 219  APPANPIQMIPTMAPLQQIPMHQHNQPATVPATV-----------------------LSQ 255

Query: 565  XXXXXXXXXXXFLSVMQEMIKKEVRNYMSGLEQQNGGFCAQADGGIRNAAVKRIGV 398
                        L+VMQEMI+KEVRNYM+GLEQ   G C QAD GIRNAAVKRIG+
Sbjct: 256  GEKPFIPFSAELLAVMQEMIRKEVRNYMAGLEQ--NGVCLQAD-GIRNAAVKRIGI 308


>gb|AAY28930.1| sucrose responsive element binding protein [Vitis vinifera]
          Length = 312

 Score =  296 bits (759), Expect = 8e-78
 Identities = 182/356 (51%), Positives = 218/356 (61%), Gaps = 4/356 (1%)
 Frame = -1

Query: 1453 MGSLRRDSDKIKGPWSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSP 1274
            M + R+D+D+IKGPWSPEED++L KLV+KHG RNWS+ISKSIPGRSGKSCRLRWCNQLSP
Sbjct: 1    MAATRKDADRIKGPWSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 60

Query: 1273 QVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCCSMIEDG 1094
            QVEHRAFTSEED+TIMRAH++FGNKWATIARLLSGRTDNAIKNHWNSTLKRKC ++ EDG
Sbjct: 61   QVEHRAFTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSAITEDG 120

Query: 1093 NSNDGFGFEEDRRRQPALKRSASAGASIPGYGGGVYFXXXXXXXXXXXXXXXXXXXXXXX 914
            +      F  D    P LKRS SAGA+ P    G+Y                        
Sbjct: 121  S------FGGDYPPHP-LKRSVSAGAAAP--VSGLYL--SPSSPCGSDVSDSSLPVVSSS 169

Query: 913  HVFRPVARSGAILPPHHPIETSPKPVAPFAKPIDPPTSLSLSLPGIAATESSSVRHKHSQ 734
            HV+RPVAR+G I+PP    ET+       +   DPPTSLSLSLPG+ + E S+   + + 
Sbjct: 170  HVYRPVARTGGIIPP----ETT-------SSSNDPPTSLSLSLPGVDSCEVSNRAPEPNH 218

Query: 733  SLPT---ALLPPNFPF-PVSTNQSNQQDQYTAFLRXXXXXXXXXXXXXXXXXXXXXXXXX 566
            + P     ++P   P   +  +Q NQ     A +                          
Sbjct: 219  APPANPIQMIPTMAPLQQIPMHQHNQPATVPATV-----------------------LSQ 255

Query: 565  XXXXXXXXXXXFLSVMQEMIKKEVRNYMSGLEQQNGGFCAQADGGIRNAAVKRIGV 398
                        L+VMQEMI+KEVRNY +GLEQ   G C QAD GIRNAAVKRIG+
Sbjct: 256  GEKPFIPFSAELLAVMQEMIRKEVRNYTAGLEQ--NGVCLQAD-GIRNAAVKRIGI 308


>gb|AFH03065.1| R2R3-MYB transcription factor MYB13 [Epimedium sagittatum]
          Length = 350

 Score =  292 bits (748), Expect = 1e-76
 Identities = 189/387 (48%), Positives = 218/387 (56%), Gaps = 37/387 (9%)
 Frame = -1

Query: 1447 SLRRDSDKIKGPWSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPQV 1268
            S R+D D+IKGPWSPEED+SLTKLV+KHG RNWS+ISKSIPGRSGKSCRLRWCNQLSPQV
Sbjct: 5    SSRKDMDRIKGPWSPEEDDSLTKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQV 64

Query: 1267 EHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCCSMIEDGNS 1088
            EHRAFT EED+TI+RAH+KFGNKWATIARLLSGRTDNAIKNHWNSTLKRKC        S
Sbjct: 65   EHRAFTPEEDDTIIRAHAKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKC--------S 116

Query: 1087 NDGFGFEEDRRRQPALKRSASAGASIPGYGGGVYFXXXXXXXXXXXXXXXXXXXXXXXHV 908
            +     ++D    P LKRS SAGA++    GG+Y                         +
Sbjct: 117  SSSMADDDD---LPPLKRSVSAGAAVT-VSGGLYL--SPGSPSGSDVSDSSLPVMSSSLI 170

Query: 907  FRPVARSGAILPPHHPIETSPKPVAPFAKPIDPPTSLSLSLPGIAA-------------- 770
            +RPVAR+G+++PP  P   S           DPPTSLSLSLPG  +              
Sbjct: 171  YRPVARTGSMVPP--PSFQS-----------DPPTSLSLSLPGAGSFPKTDKTDSPPFCL 217

Query: 769  ------TESSSVR-----------HKHSQ--SLPTALLPPNF---PFPVSTNQSNQQDQY 656
                   ES S R           HK  Q  S P   +PP+F   P P+    S  Q+QY
Sbjct: 218  SVSRTEPESESPRFPPSPNPTENHHKQQQQSSHPAPPVPPSFLPPPVPIRQMPSPNQNQY 277

Query: 655  TAFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSVMQEMIKKEVRNYMSG 476
             + ++                                    FL VMQEMIKKEVRNYMS 
Sbjct: 278  MSSMQ----------------EPQQQRMEQAEKGFMPFNPEFLQVMQEMIKKEVRNYMSN 321

Query: 475  LEQQNGGFCAQA-DGGIRNAAVKRIGV 398
            LEQ   G C QA D GIRNAAVKRIG+
Sbjct: 322  LEQ--SGMCFQAPDAGIRNAAVKRIGI 346


>ref|NP_001235142.1| MYB transcription factor MYB112 [Glycine max]
            gi|110931706|gb|ABH02852.1| MYB transcription factor
            MYB112 [Glycine max]
          Length = 305

 Score =  285 bits (728), Expect = 3e-74
 Identities = 176/347 (50%), Positives = 203/347 (58%), Gaps = 3/347 (0%)
 Frame = -1

Query: 1429 DKIKGPWSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPQVEHRAFT 1250
            D+IKGPWSPEEDE+L KLVEKHG RNWS+ISKSIPGRSGKSCRLRWCNQLSPQVEHRAFT
Sbjct: 2    DRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFT 61

Query: 1249 SEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCCS-MIEDGNSNDGFG 1073
             EED+TI+RAH++FGNKWATIARLL GRTDNAIKNHWNSTLKRKC S MI+D N+     
Sbjct: 62   HEEDDTIIRAHARFGNKWATIARLLHGRTDNAIKNHWNSTLKRKCTSTMIDDDNT----- 116

Query: 1072 FEEDRRRQPALKRSASAGASIPGYGGGVYFXXXXXXXXXXXXXXXXXXXXXXXHVFRPVA 893
                    P LKRS SAGA+IP   G                           HVFRPV 
Sbjct: 117  --------PPLKRSLSAGAAIPVSTGLYMNPPTPGSPSGSDVSESSVLVASSSHVFRPVP 168

Query: 892  RSGAILPPHHPIETSPKPVAPFAKPIDPPTSLSLSLPGIAATESSSVRHKHSQSLPTALL 713
            R+GA+LP   P+ET+           DPPTSLSLSLPG+   +SS V ++ ++ +  A  
Sbjct: 169  RTGAVLP---PVETTTT-----LSSNDPPTSLSLSLPGV---DSSEVSNRTTEPIHAAPP 217

Query: 712  PPNFPFPVSTNQSNQQDQYTAFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 533
            PP  P P   N        T                                        
Sbjct: 218  PPPQPQPQPLNTIPLLPMMTV-----------------------PSVSPTGMAPFNFSAE 254

Query: 532  FLSVMQEMIKKEVRNYMSGLEQQNGGFCAQA--DGGIRNAAVKRIGV 398
            FL+VMQEMI+KEVR+YM  L  Q  G C QA  + G RNA+VKRIG+
Sbjct: 255  FLAVMQEMIRKEVRSYME-LHNQKNGMCFQAAVNDGFRNASVKRIGI 300


>ref|XP_002310702.1| predicted protein [Populus trichocarpa] gi|222853605|gb|EEE91152.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  279 bits (714), Expect = 1e-72
 Identities = 168/357 (47%), Positives = 209/357 (58%), Gaps = 5/357 (1%)
 Frame = -1

Query: 1453 MGSLRRDSDKIKGPWSPEEDESLTKLVEKHGARNWSVISKSIPGRSGKSCRLRWCNQLSP 1274
            M   R++ D+IKGPWSPEEDE+L KLV+KHGARNWS+ISKSIPGRSGKSCRLRWCNQLSP
Sbjct: 1    MAITRKEMDRIKGPWSPEEDEALQKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLSP 60

Query: 1273 QVEHRAFTSEEDETIMRAHSKFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCCSMIEDG 1094
            QVEHR FT +ED+TI+RAH++FGNKWATIARLL GRTDNAIKNHWNSTLKRKC SM EDG
Sbjct: 61   QVEHRPFTPDEDDTIIRAHARFGNKWATIARLLYGRTDNAIKNHWNSTLKRKCSSMAEDG 120

Query: 1093 N--SNDGFGFEEDRRRQPALKRSASAGASIPGYGGGVYFXXXXXXXXXXXXXXXXXXXXX 920
            N  + +G+    D      LKRS SAG+ +P   G                         
Sbjct: 121  NFCNREGYDGNLDGDNTQPLKRSVSAGSGVPVSTGLYMSPGSPSGSDVSDSSLPGLSSSY 180

Query: 919  XXHVFRPVARSGAILPPHHPIETSPKPVAPFAKPIDPPTSLSLSLPGIAATESSSVRHKH 740
              +++RPVAR+GA++P   P+ET+    +      DPPTSLSLSLPG    +SS V ++ 
Sbjct: 181  NYNIYRPVARTGAVMP---PVETT----SSSDNNNDPPTSLSLSLPG---ADSSEVSNQV 230

Query: 739  SQSLPTALLPPNFPFPVSTNQSNQQDQYTAFLRXXXXXXXXXXXXXXXXXXXXXXXXXXX 560
             +  P+ L   N   P+ T ++    + +  +                            
Sbjct: 231  GE--PSQLPKSNTVTPLLTGRNAPAQEVSPAV-------------------------GGL 263

Query: 559  XXXXXXXXXFLSVMQEMIKKEVRNYMSGLEQQNGGFCAQ--ADGGIRNAAV-KRIGV 398
                     F+SVMQEMI+KEVRNYM       GG C Q  +  G RN AV  R+G+
Sbjct: 264  SGSVGFNTEFMSVMQEMIRKEVRNYMMEHSGVGGGMCYQGMSGEGFRNVAVNNRVGL 320


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