BLASTX nr result

ID: Coptis21_contig00002255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002255
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301799.1| predicted protein [Populus trichocarpa] gi|2...   151   3e-34
ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|2...   150   5e-34
gb|ACJ86065.1| unknown [Medicago truncatula] gi|388494518|gb|AFK...   149   2e-33
gb|ACJ83847.1| unknown [Medicago truncatula]                          149   2e-33
ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246...   148   3e-33

>ref|XP_002301799.1| predicted protein [Populus trichocarpa] gi|222843525|gb|EEE81072.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  151 bits (382), Expect = 3e-34
 Identities = 94/222 (42%), Positives = 121/222 (54%)
 Frame = -3

Query: 979 PLRGYVRNNRRRKLLDVDLNVPPGEALEERAGNAANXXXXXXXXQRGEQESGGSCSCPVL 800
           PLRGY    RRRK + +DLNVPP +  ++  G +          Q   Q +G   S P  
Sbjct: 12  PLRGY----RRRKTV-LDLNVPPIDGRDDE-GTSTTRIEPPQGVQASHQRNGQGPSLP-- 63

Query: 799 QEPAMIDVEAIDDEVVISSPRXXXXXXXXXXXXXXXXVLEAPRVHPGNSEEEITRLSLNS 620
             P  IDV+AIDD+V+ SSPR                V    R                +
Sbjct: 64  --PPTIDVDAIDDDVIESSPRAFAQAKNNSRRALVVDVESGGRF---------------T 106

Query: 619 YNMRRRVPPNQTIIDCEQYINIESTVTAKEQTAKKSQEPVQIIPPPKEPVFTCPVCTNTL 440
           +N RRRVPPNQTII+C+ YIN+E        ++   +E VQ +PP KEP F CP+C   L
Sbjct: 107 HNKRRRVPPNQTIINCDLYINLEGG----SSSSSSKRENVQTLPP-KEPTFNCPICLCPL 161

Query: 439 VEEMTTKCGHIFCKKCIKDSISFQNKCPICRRKLTMKDIIRV 314
           VEEM+TKCGHIFCK CI D+I  Q KCP CR+++T K++IRV
Sbjct: 162 VEEMSTKCGHIFCKACISDAIKRQAKCPTCRKRVTTKELIRV 203


>ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|222862061|gb|EEE99603.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  150 bits (380), Expect = 5e-34
 Identities = 95/222 (42%), Positives = 124/222 (55%)
 Frame = -3

Query: 979 PLRGYVRNNRRRKLLDVDLNVPPGEALEERAGNAANXXXXXXXXQRGEQESGGSCSCPVL 800
           PLRGY    RRRK + +DLN PP E   +   ++           +G Q S    S P  
Sbjct: 12  PLRGY----RRRKTV-LDLNAPPTEGRGDEGTSSRTEP-------QGVQASQQGQSLP-- 57

Query: 799 QEPAMIDVEAIDDEVVISSPRXXXXXXXXXXXXXXXXVLEAPRVHPGNSEEEITRLSLNS 620
             P  IDV+  DD+V+ SSP                 V+    V  G +    +RLS N+
Sbjct: 58  --PPTIDVDVFDDDVIESSPTAFAEAKNNSRRARGRAVVVD--VESGRT----SRLSHNN 109

Query: 619 YNMRRRVPPNQTIIDCEQYINIESTVTAKEQTAKKSQEPVQIIPPPKEPVFTCPVCTNTL 440
            N RRRVPPNQTII+C+ YIN+E        +++  +E VQ +PP KEP F CP+C   L
Sbjct: 110 LNKRRRVPPNQTIINCDLYINLEG---GSSSSSRSMRENVQTLPP-KEPTFNCPICLCPL 165

Query: 439 VEEMTTKCGHIFCKKCIKDSISFQNKCPICRRKLTMKDIIRV 314
           VEEM+TKCGHIFCK CI D+I  Q KCP CR+++T K++IRV
Sbjct: 166 VEEMSTKCGHIFCKTCIADAIKRQAKCPTCRKRVTNKELIRV 207


>gb|ACJ86065.1| unknown [Medicago truncatula] gi|388494518|gb|AFK35325.1| unknown
            [Medicago truncatula]
          Length = 242

 Score =  149 bits (376), Expect = 2e-33
 Identities = 101/251 (40%), Positives = 136/251 (54%), Gaps = 21/251 (8%)
 Frame = -3

Query: 1003 MTTPEVRRPLRGYVRNNRRRKL-LDVDLN-VPPGEALEERAGNAANXXXXXXXXQR---- 842
            M+T   R P+   +R NRRRK  +D+DLN VP  E    R   A N        +R    
Sbjct: 1    MSTRTSRVPVG--IRTNRRRKAAIDLDLNRVPAAEHSTARNPIAENPSGENREQERRLTQ 58

Query: 841  -GEQE-------------SGGSCSCPVLQEPAMIDVEAIDDE-VVISSPRXXXXXXXXXX 707
             G QE                        EP +IDVEAIDD+ VV+SSPR          
Sbjct: 59   LGPQEVEVQANQQQEVEVQANQLQLVAQPEPTLIDVEAIDDDDVVLSSPRAFAEAKNNSR 118

Query: 706  XXXXXXVLEAPRVHPGNSEEEITRLSLNSYNMRRRVPPNQTIIDCEQYINIESTVTAKEQ 527
                  V++       + EE+I RLS N+ N RRR  P ++I +C+ YIN++++ +   +
Sbjct: 119  RNRGRTVVDV------DLEEQI-RLSNNNRNKRRRESPKRSIFNCDLYINLDASSSNTME 171

Query: 526  TAKKSQEPVQIIPPPKEPVFTCPVCTNTLVEEMTTKCGHIFCKKCIKDSISFQNKCPICR 347
            + KK  EP      PKEPVFTCP+C   +VEEM+T+CGHIFCK CIK +IS Q KCP CR
Sbjct: 172  SVKKPPEP------PKEPVFTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCR 225

Query: 346  RKLTMKDIIRV 314
            +K+T+K++IRV
Sbjct: 226  KKITVKELIRV 236


>gb|ACJ83847.1| unknown [Medicago truncatula]
          Length = 247

 Score =  149 bits (376), Expect = 2e-33
 Identities = 101/251 (40%), Positives = 134/251 (53%), Gaps = 21/251 (8%)
 Frame = -3

Query: 1003 MTTPEVRRPLRGYVRNNRRRKL-LDVDLN-VPPGEALEERAGNAANXXXXXXXXQR---- 842
            M+T   R P+   +R NRRRK  +D+DLN VP  E    R   A N        +R    
Sbjct: 1    MSTRTSRVPVG--IRTNRRRKAAIDLDLNRVPAAEHSTARNPIAENPSGENREQERRLTQ 58

Query: 841  -GEQE-------------SGGSCSCPVLQEPAMIDVEAIDDE-VVISSPRXXXXXXXXXX 707
             G QE                        EP +IDVEAIDD+ VV+SSPR          
Sbjct: 59   LGPQEVEVQANQQQEVEVQANQLQLVAQPEPTLIDVEAIDDDDVVLSSPRAFAEAKNNSR 118

Query: 706  XXXXXXVLEAPRVHPGNSEEEITRLSLNSYNMRRRVPPNQTIIDCEQYINIESTVTAKEQ 527
                  V++   V      EE  RLS N+ N RRR  P ++I +C+ YIN++++ +   +
Sbjct: 119  RNRGRTVVDVDLVM--FFAEEQIRLSNNNRNKRRRESPKRSIFNCDLYINLDASSSNTME 176

Query: 526  TAKKSQEPVQIIPPPKEPVFTCPVCTNTLVEEMTTKCGHIFCKKCIKDSISFQNKCPICR 347
            + KK  EP      PKEPVFTCP+C   +VEEM+T+CGHIFCK CIK +IS Q KCP CR
Sbjct: 177  SVKKPPEP------PKEPVFTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCR 230

Query: 346  RKLTMKDIIRV 314
            +K+T+K++IRV
Sbjct: 231  KKITVKELIRV 241


>ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246586 [Vitis vinifera]
          Length = 209

 Score =  148 bits (373), Expect = 3e-33
 Identities = 98/226 (43%), Positives = 127/226 (56%), Gaps = 4/226 (1%)
 Frame = -3

Query: 979 PLRGYVRNNRRRK-LLDVDLN-VPPGEALEERAGNAANXXXXXXXXQRGEQESGGSCSCP 806
           PLR Y R++RRRK +L++DLN  PP +  +                    QE     + P
Sbjct: 10  PLR-YARSSRRRKTVLNLDLNDTPPTDTRD--------------------QEGPSIRTMP 48

Query: 805 VLQEPAMIDVEAIDDEVVISSPRXXXXXXXXXXXXXXXXVLEAPRVHPGNSEEEITRLSL 626
           V   PA IDVEAIDDEVV SS                  V++       + E + TR  L
Sbjct: 49  V--PPAAIDVEAIDDEVVESSATAFAAARNNSRRIRGRTVVDV------DLEVQTTR-PL 99

Query: 625 NSYNMRRRVPPNQTIIDCEQYINIESTVTAKEQTAKKSQEPVQIIPP--PKEPVFTCPVC 452
           N+ N RRR PPNQTII+ ++YIN+ES+ +   +   K  E    +PP  PKEP F CP+C
Sbjct: 100 NNRNKRRRAPPNQTIINDDRYINLESSNSLLREN--KPPEQTWHVPPLPPKEPTFNCPIC 157

Query: 451 TNTLVEEMTTKCGHIFCKKCIKDSISFQNKCPICRRKLTMKDIIRV 314
              LV+EM+TKCGHIFCK CIK +IS Q KCP CR+++TMKD IR+
Sbjct: 158 MGQLVDEMSTKCGHIFCKMCIKAAISAQGKCPTCRKRVTMKDTIRI 203


Top