BLASTX nr result

ID: Coptis21_contig00002251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002251
         (1314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306121.1| predicted protein [Populus trichocarpa] gi|2...   543   e-152
ref|XP_002300747.1| predicted protein [Populus trichocarpa] gi|1...   543   e-152
ref|XP_002307679.1| predicted protein [Populus trichocarpa] gi|2...   542   e-152
ref|XP_002281107.1| PREDICTED: 26S protease regulatory subunit S...   542   e-152
ref|XP_002510440.1| 26S protease regulatory subunit S10b, putati...   541   e-151

>ref|XP_002306121.1| predicted protein [Populus trichocarpa] gi|222849085|gb|EEE86632.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  543 bits (1399), Expect = e-152
 Identities = 284/332 (85%), Positives = 285/332 (85%)
 Frame = -1

Query: 1314 RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN 1135
            RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN
Sbjct: 68   RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN 127

Query: 1134 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 955
            MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT
Sbjct: 128  MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 187

Query: 954  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 775
            LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR
Sbjct: 188  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 247

Query: 774  RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 595
            RFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGRLDRKIEI
Sbjct: 248  RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 307

Query: 594  PLPNEQSRMEILKIHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
            PLPNEQSRMEILKIHA                                            
Sbjct: 308  PLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 367

Query: 414  XXHEDFMKAVRKLNEAKKLESTAHYNADFGKD 319
              HEDFMKAVRKLNEAKKLES+AHYNADFGKD
Sbjct: 368  VIHEDFMKAVRKLNEAKKLESSAHYNADFGKD 399


>ref|XP_002300747.1| predicted protein [Populus trichocarpa] gi|118483383|gb|ABK93592.1|
            unknown [Populus trichocarpa] gi|222842473|gb|EEE80020.1|
            predicted protein [Populus trichocarpa]
          Length = 402

 Score =  543 bits (1398), Expect = e-152
 Identities = 283/332 (85%), Positives = 285/332 (85%)
 Frame = -1

Query: 1314 RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN 1135
            RPLDNERLIVKASSGPRYVVGCRSKVDKEKLT+GTRVVLDMTTLTIMRALPREVDPVVYN
Sbjct: 71   RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYN 130

Query: 1134 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 955
            MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF+RVGIKPPKGVLLYGPPGTGKT
Sbjct: 131  MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKT 190

Query: 954  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 775
            LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR
Sbjct: 191  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 250

Query: 774  RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 595
            RFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGRLDRKIEI
Sbjct: 251  RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 310

Query: 594  PLPNEQSRMEILKIHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
            PLPNEQSRMEILKIHA                                            
Sbjct: 311  PLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 370

Query: 414  XXHEDFMKAVRKLNEAKKLESTAHYNADFGKD 319
              HEDFMKAVRKLNEAKKLESTAHYNADFGKD
Sbjct: 371  VIHEDFMKAVRKLNEAKKLESTAHYNADFGKD 402


>ref|XP_002307679.1| predicted protein [Populus trichocarpa] gi|222857128|gb|EEE94675.1|
            predicted protein [Populus trichocarpa]
          Length = 402

 Score =  542 bits (1396), Expect = e-152
 Identities = 283/332 (85%), Positives = 285/332 (85%)
 Frame = -1

Query: 1314 RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN 1135
            RPLDNERLIVKASSGPRYVVGCRSKVDKEKLT+GTRVVLDMTTLTIMRALPREVDPVVYN
Sbjct: 71   RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYN 130

Query: 1134 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 955
            MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT
Sbjct: 131  MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 190

Query: 954  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 775
            LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR
Sbjct: 191  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 250

Query: 774  RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 595
            RFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGRLDRKIEI
Sbjct: 251  RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 310

Query: 594  PLPNEQSRMEILKIHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
            PLPNEQSRMEILKIHA                                            
Sbjct: 311  PLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 370

Query: 414  XXHEDFMKAVRKLNEAKKLESTAHYNADFGKD 319
              HEDFMKAVRKLNEAKKLES+AHYNADFGKD
Sbjct: 371  VIHEDFMKAVRKLNEAKKLESSAHYNADFGKD 402


>ref|XP_002281107.1| PREDICTED: 26S protease regulatory subunit S10B homolog B [Vitis
            vinifera] gi|147800891|emb|CAN75568.1| hypothetical
            protein VITISV_010255 [Vitis vinifera]
            gi|302142551|emb|CBI19754.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  542 bits (1396), Expect = e-152
 Identities = 283/332 (85%), Positives = 285/332 (85%)
 Frame = -1

Query: 1314 RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN 1135
            RPLDNERLIVKASSGPRYVVGCRSKVDKEKLT+GTRVVLDMTTLTIMRALPREVDPVVYN
Sbjct: 67   RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYN 126

Query: 1134 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 955
            MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT
Sbjct: 127  MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 186

Query: 954  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 775
            LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR
Sbjct: 187  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 246

Query: 774  RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 595
            RFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGRLDRKIEI
Sbjct: 247  RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 306

Query: 594  PLPNEQSRMEILKIHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
            PLPNEQSRMEILKIHA                                            
Sbjct: 307  PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 366

Query: 414  XXHEDFMKAVRKLNEAKKLESTAHYNADFGKD 319
              HEDFMKAVRKLNEAKKLES+AHYNADFGKD
Sbjct: 367  VIHEDFMKAVRKLNEAKKLESSAHYNADFGKD 398


>ref|XP_002510440.1| 26S protease regulatory subunit S10b, putative [Ricinus communis]
            gi|223551141|gb|EEF52627.1| 26S protease regulatory
            subunit S10b, putative [Ricinus communis]
          Length = 399

 Score =  541 bits (1395), Expect = e-151
 Identities = 283/332 (85%), Positives = 285/332 (85%)
 Frame = -1

Query: 1314 RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN 1135
            RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN
Sbjct: 68   RPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYN 127

Query: 1134 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 955
            MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT
Sbjct: 128  MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKT 187

Query: 954  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 775
            LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR
Sbjct: 188  LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 247

Query: 774  RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 595
            RFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGRLDRKIEI
Sbjct: 248  RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 307

Query: 594  PLPNEQSRMEILKIHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
            PLPNEQSRMEILKIHA                                            
Sbjct: 308  PLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDY 367

Query: 414  XXHEDFMKAVRKLNEAKKLESTAHYNADFGKD 319
              HEDFMKAVRKLNEAKKLES+AHYNADFGK+
Sbjct: 368  VIHEDFMKAVRKLNEAKKLESSAHYNADFGKE 399


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