BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002249
         (1725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vit...   373   e-100
ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [S...   352   2e-94
ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus ...   341   3e-91
ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1...   340   7e-91

>ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vitis vinifera]
            gi|359496684|ref|XP_003635300.1| PREDICTED: F-box protein
            FBW2 isoform 2 [Vitis vinifera]
            gi|296085646|emb|CBI29445.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  373 bits (957), Expect = e-100
 Identities = 189/318 (59%), Positives = 230/318 (72%), Gaps = 1/318 (0%)
 Frame = +3

Query: 543  RRWDELIPDALALIFKNLNLQQILTVIPRVCKSWGKVVAGPYCWQEIDIEEWSLNVEPDQ 722
            R WDELIPDAL LIF NL+LQ+ILTVIPRVCKSW K V GPYCWQEIDI EWS    P+ 
Sbjct: 8    RSWDELIPDALGLIFSNLSLQEILTVIPRVCKSWRKTVMGPYCWQEIDIVEWSQRSSPEN 67

Query: 723  LDRMIRMLITQSGGCFRKLCASGIPNNGQLISFVADHARSLHTLKLPRSDISNSMVESIV 902
            LDRM+ ML+T+S G  RKLC SG+P +    SFVADHA+SL TL+LPRS+IS+ +VE + 
Sbjct: 68   LDRMLEMLMTRSAGSHRKLCVSGLPTDASF-SFVADHAKSLQTLRLPRSEISDPIVEEVA 126

Query: 903  KKLSNISFLDVSYCHYIGAPALEAIGNHCKSLAVLQRVMHPLTVEQMVCQDEEAHAIATT 1082
             KLS I+FLDVSYC  +GAPALEAIG HCK L  L+R+MHPL +   + QD+EA AIA T
Sbjct: 127  WKLSTITFLDVSYCRKMGAPALEAIGKHCKFLTGLRRIMHPLEIIDKLTQDDEALAIAAT 186

Query: 1083 MPKLKHLELAYALVSTDAVREILFKCRQLEYLDLRGCWDVKLDEEFLKEKFSGVKVLGPH 1262
            MPKLKHLE+AY LVST+ V +IL  C +LE LD+RGCW+VKLDE+ +K KFSG+KV+GP 
Sbjct: 187  MPKLKHLEIAYLLVSTEPVLKILASCCELELLDVRGCWNVKLDEKLIK-KFSGLKVVGPL 245

Query: 1263 VEDSYERNIWEDCSDFSDSSSYLAWEFMAGQVGXXXXXXXXXXXXXXXMWDDEQRXXXXX 1442
            V D YE N W+DCS +S SS YLAW+F+AG++                 W+DE       
Sbjct: 246  VIDCYEGNGWDDCSAYSGSSGYLAWDFVAGEM-------DYYDDELYAAWEDES-MDDLE 297

Query: 1443 XRFYEGFNGP-IGYAWPQ 1493
             RFY+GF+    G+ WPQ
Sbjct: 298  LRFYDGFDADNAGFDWPQ 315


>ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  371 bits (952), Expect = e-100
 Identities = 188/318 (59%), Positives = 228/318 (71%), Gaps = 2/318 (0%)
 Frame = +3

Query: 543  RRWDELIPDALALIFKNLNLQQILTVIPRVCKSWGKVVAGPYCWQEIDIEEWSLNVEPDQ 722
            RRWDELIPDAL LIF+NL+LQ+ILT++PRVCKSW + V+GPYCWQEI+IEEWS    PD 
Sbjct: 8    RRWDELIPDALGLIFRNLSLQEILTMVPRVCKSWSRAVSGPYCWQEINIEEWSTRCHPDH 67

Query: 723  LDRMIRMLITQSGGCFRKLCASGIPNNGQLISFVADHARSLHTLKLPRSDISNSMVESIV 902
            LDRM++MLIT+S G  RKLC SG+ N+    SF+ADHA SL TL++PRSDI +S+VE I 
Sbjct: 68   LDRMLQMLITRSCGSLRKLCVSGLHNDTNF-SFLADHAGSLQTLRIPRSDIGDSIVEQIA 126

Query: 903  KKLSNISFLDVSYCHYIGAPALEAIGNHCKSLAVLQRVMHPLTVEQMVCQDEEAHAIATT 1082
             +LS ++FLDVSYC+ I   ALEAIG HCK L  L R MHPL  E +  QD+EA+AIATT
Sbjct: 127  GRLSTVTFLDVSYCNKISGRALEAIGKHCKLLVGLCRNMHPLDTEGLEAQDDEAYAIATT 186

Query: 1083 MPKLKHLELAYALVSTDAVREILFKCRQLEYLDLRGCWDVKLDEEFLKEKFSGVKVLGPH 1262
            MPKLK LE+AY LVST+++ +IL  C  LE++DLRGCW+V LD +F KEKF  + VLGP 
Sbjct: 187  MPKLKRLEMAYHLVSTESLLQILSSCTNLEFMDLRGCWNVNLDNKFFKEKFQKLTVLGPL 246

Query: 1263 V-EDSYERNIW-EDCSDFSDSSSYLAWEFMAGQVGXXXXXXXXXXXXXXXMWDDEQRXXX 1436
            V ED YE N W EDCS++SD S YLAW F+AG  G               MWDDE R   
Sbjct: 247  VMEDYYEANDWEEDCSEYSDDSDYLAWGFLAGDGG-----DYDDDESYDEMWDDEGRLEE 301

Query: 1437 XXXRFYEGFNGPIGYAWP 1490
               RFYEG +  + Y WP
Sbjct: 302  LELRFYEGADAGL-YGWP 318


>ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [Sorghum bicolor]
            gi|241934071|gb|EES07216.1| hypothetical protein
            SORBIDRAFT_04g027350 [Sorghum bicolor]
          Length = 365

 Score =  352 bits (902), Expect = 2e-94
 Identities = 173/319 (54%), Positives = 229/319 (71%), Gaps = 3/319 (0%)
 Frame = +3

Query: 543  RRWDELIPDALALIFKNLNLQQILTVIPRVCKSWGKVVAGPYCWQEIDIEEWSLNV-EPD 719
            R W+EL+PDAL LIF+NL LQ++LTV+PRVCKSWG+VVAGPYCWQEIDIEEWS    +PD
Sbjct: 54   RCWEELLPDALGLIFRNLPLQEMLTVVPRVCKSWGRVVAGPYCWQEIDIEEWSQQQSKPD 113

Query: 720  QLDRMIRMLITQSGGCFRKLCASGIPNNGQLISFVADHARSLHTLKLPRSDISNSMVESI 899
            Q+ RM+ +LI +SGG  R++  SG+P +  L SF+ D+AR+L TL++PRS+IS+S+VE++
Sbjct: 114  QIGRMVELLIGRSGGSCRRISVSGLPCD-PLFSFIGDNARALRTLEIPRSEISDSIVETV 172

Query: 900  VKKLSNISFLDVSYCHYIGAPALEAIGNHCKSLAVLQRVMHPLTVEQMVCQDEEAHAIAT 1079
              +LSN++FLD+S C  IGA ALEA G HCKSL  L+RVMHP+ +   VCQ +EAHAIA 
Sbjct: 173  APRLSNVTFLDISSCTKIGARALEAFGKHCKSLVGLRRVMHPIDLVDKVCQHDEAHAIAC 232

Query: 1080 TMPKLKHLELAYALVSTDAVREILFKCRQLEYLDLRGCWDVKLDEEFLKEKFSGVKVLGP 1259
            +MPKL+HLE+ Y L++T+AV EIL +CR L++LDLRGCW V  D++FL+E+  G++VLGP
Sbjct: 233  SMPKLRHLEMGYMLIATEAVLEILGQCRDLKFLDLRGCWTV--DDKFLRERHPGLRVLGP 290

Query: 1260 HVEDSYERNIWEDCSDFSDSSSYLAWEFMAGQVGXXXXXXXXXXXXXXXMWDDEQRXXXX 1439
             V+D YE + WE+CSD+SD SS  +WEFM                    +WDD Q     
Sbjct: 291  RVDDCYENSYWEECSDYSDDSSIYSWEFM-------DDDYYAVGSDDEAIWDDGQGLENL 343

Query: 1440 XXRFYEG--FNGPIGYAWP 1490
              RFY G       G+ WP
Sbjct: 344  EVRFYGGGFSESFAGFDWP 362


>ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223547036|gb|EEF48533.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 329

 Score =  341 bits (875), Expect = 3e-91
 Identities = 176/322 (54%), Positives = 224/322 (69%), Gaps = 6/322 (1%)
 Frame = +3

Query: 543  RRWDELIPDALALIFKNLNLQQILTVIPRVCKSWGKVVAGPYCWQEIDIEEWSLNVEPDQ 722
            R WDELIPDAL LIF+NL+LQ+ILTV+PRVCKSW + V+GPYCWQEIDIEEWS   +P  
Sbjct: 8    RCWDELIPDALGLIFRNLSLQEILTVVPRVCKSWNRAVSGPYCWQEIDIEEWSNKRQPHH 67

Query: 723  LDRMIRMLITQSGGCFRKLCASGIPNNGQLISFVADHARSLHTLKLPRSDISNSMVESIV 902
            +DRM+RMLI +S G  RKLC SGIP++  +  F+ADHA SL TL+ PRS+IS+S+VE I 
Sbjct: 68   IDRMLRMLIARSCGSLRKLCVSGIPSDA-IFPFLADHAGSLQTLRTPRSEISDSIVEQIA 126

Query: 903  KKLSNISFLDVSYCHYIGAPALEAIGNHCKSLAVLQRVMHPLTVEQMVCQDEEAHAIATT 1082
             +LS I+FLDVS+C+ I A ALEAIG +CK L+ L R +   +    + QD+EA AIA+T
Sbjct: 127  GRLSTITFLDVSHCNEISARALEAIGKNCKLLSGLCRNVELSSSANQLLQDDEAQAIAST 186

Query: 1083 MPKLKHLELAY-ALVSTDAVREILFKCRQLEYLDLRGCWDVKLDEEFLKEKFSGVKVLGP 1259
            MPKLKHLE+AY  L++T++V +IL  C +LE+L+L GCWDVK D  FL+EKF  +KV+GP
Sbjct: 187  MPKLKHLEVAYHLLINTESVLKILSSCPELEFLNLTGCWDVKFDRNFLQEKFPKLKVVGP 246

Query: 1260 HVEDSYERNIWED-CSD----FSDSSSYLAWEFMAGQVGXXXXXXXXXXXXXXXMWDDEQ 1424
            H+ D Y+ N W D CS+    +SD+S Y AWE  +G +                MWDDEQ
Sbjct: 247  HLLDYYDMNDWGDYCSEYSDAYSDASEYFAWEIFSGDM--EDYDDDDDDDSYDGMWDDEQ 304

Query: 1425 RXXXXXXRFYEGFNGPIGYAWP 1490
            R      RFYEG      Y WP
Sbjct: 305  RLEELELRFYEGNEDAGLYGWP 326


>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max]
            gi|356508075|ref|XP_003522786.1| PREDICTED: F-box protein
            FBW2-like isoform 2 [Glycine max]
          Length = 321

 Score =  340 bits (872), Expect = 7e-91
 Identities = 176/316 (55%), Positives = 215/316 (68%)
 Frame = +3

Query: 543  RRWDELIPDALALIFKNLNLQQILTVIPRVCKSWGKVVAGPYCWQEIDIEEWSLNVEPDQ 722
            R W ELIPDAL +IF NL+LQ+ +TVIPRVCKSW   V GPYCWQEIDI++WS   +PDQ
Sbjct: 8    RSWAELIPDALGVIFTNLSLQERVTVIPRVCKSWANAVTGPYCWQEIDIKDWSNRCQPDQ 67

Query: 723  LDRMIRMLITQSGGCFRKLCASGIPNNGQLISFVADHARSLHTLKLPRSDISNSMVESIV 902
            LDR++ MLIT+S G  RKL  SG+     + +F+A++A SLHTL+LPRS +++S+VE I 
Sbjct: 68   LDRLLEMLITRSSGSLRKLSVSGLQTES-IFTFIAENACSLHTLRLPRSSMNDSIVEQIA 126

Query: 903  KKLSNISFLDVSYCHYIGAPALEAIGNHCKSLAVLQRVMHPLTVEQMVCQDEEAHAIATT 1082
             +LS ISFLDVSYC  IG  ALE IG +CK L  L R MHPL       QD+EA+AIA+T
Sbjct: 127  GRLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTASKPFQDDEAYAIAST 186

Query: 1083 MPKLKHLELAYALVSTDAVREILFKCRQLEYLDLRGCWDVKLDEEFLKEKFSGVKVLGPH 1262
            MPKLKHLE+AY L+ST  V +IL  C +LE+LD RGCW V LD  FLK+KF  +KVLGP 
Sbjct: 187  MPKLKHLEMAYHLISTSGVLQILANCPKLEFLDQRGCWGVTLDHMFLKQKFPKLKVLGPF 246

Query: 1263 VEDSYERNIWEDCSDFSDSSSYLAWEFMAGQVGXXXXXXXXXXXXXXXMWDDEQRXXXXX 1442
            V D+YE + W+D SD SDSS YLAW+F+AG +                MWDDE R     
Sbjct: 247  VLDTYESDGWDDFSDVSDSSEYLAWDFVAGGM---EEYYVDDSDSYDGMWDDEGRLDELQ 303

Query: 1443 XRFYEGFNGPIGYAWP 1490
              FYEG     G  WP
Sbjct: 304  FGFYEGIE-DAGMYWP 318