BLASTX nr result

ID: Coptis21_contig00002246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002246
         (2012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245...   170   1e-39
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]   170   1e-39
ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...   165   4e-38
ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-35
ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|2...   154   1e-34

>ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera]
          Length = 314

 Score =  170 bits (431), Expect = 1e-39
 Identities = 82/168 (48%), Positives = 117/168 (69%), Gaps = 10/168 (5%)
 Frame = +1

Query: 253 TPSECSGCNLTERWLLHNVCMREVYRRLCTSCVLKLHSGSFCPICFQVYDSGPNNAPIER 432
           T  EC GC+LT+RWLLH+V  R +YRRLCTSCVLKLH G FCPICF+ YD  P  +P  R
Sbjct: 6   TTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPP--SPHLR 63

Query: 433 VICLRCPSITHKECVTKDVINSYICPPCANPNFTFFDTSRSGKE----------IELSGS 582
            +C +CPSI+H+ CV     +S++CPPC NP F+FFD +R+ K+          I+L+ +
Sbjct: 64  SLCQKCPSISHQHCVASH-SDSFVCPPCLNPTFSFFDPARTPKDAQNPQSDRRYIDLNSA 122

Query: 583 KVFLAAARIASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEVNA 726
           KV   AARI+ ++M +AA  +R ++ER+V+EA  ++K A+E+L+ V +
Sbjct: 123 KVVACAARISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQHVES 170


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score =  170 bits (431), Expect = 1e-39
 Identities = 82/168 (48%), Positives = 117/168 (69%), Gaps = 10/168 (5%)
 Frame = +1

Query: 253  TPSECSGCNLTERWLLHNVCMREVYRRLCTSCVLKLHSGSFCPICFQVYDSGPNNAPIER 432
            T  EC GC+LT+RWLLH+V  R +YRRLCTSCVLKLH G FCPICF+ YD  P  +P  R
Sbjct: 768  TTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPP--SPHLR 825

Query: 433  VICLRCPSITHKECVTKDVINSYICPPCANPNFTFFDTSRSGKE----------IELSGS 582
             +C +CPSI+H+ CV     +S++CPPC NP F+FFD +R+ K+          I+L+ +
Sbjct: 826  SLCQKCPSISHQHCVASH-SDSFVCPPCLNPTFSFFDPARTPKDAQNPQSDRRYIDLNSA 884

Query: 583  KVFLAAARIASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEVNA 726
            KV   AARI+ ++M +AA  +R ++ER+V+EA  ++K A+E+L+ V +
Sbjct: 885  KVVACAARISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQHVES 932


>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score =  165 bits (418), Expect = 4e-38
 Identities = 79/157 (50%), Positives = 111/157 (70%), Gaps = 4/157 (2%)
 Frame = +1

Query: 262 ECSGCNLTERWLLHNVCMREVYRRLCTSCVLKLHSGSFCPICFQVY--DSGPNNAPIERV 435
           +C GC    RWLLHNV  R  YRRLCT+C+LK H G FCP CF VY  DS    AP ERV
Sbjct: 6   QCGGCGGENRWLLHNVRHRAAYRRLCTNCILKTHQGLFCPFCFHVYDHDSLLVPAPEERV 65

Query: 436 ICLRCPSITHKECVTK-DVINSYICPPCANPNFTFFDTSRSGK-EIELSGSKVFLAAARI 609
           +CL+CPSI+H  C+      + ++CPPC++PNF+FF+        I++  ++  +AAA+I
Sbjct: 66  MCLKCPSISHLSCLPPFHNTSPFLCPPCSSPNFSFFNLPHDDDVSIDIDSARALVAAAKI 125

Query: 610 ASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEV 720
           A+VSM++AA LAR++AER+V+EA +++K A+EALE +
Sbjct: 126 AAVSMAKAAALARLEAERRVKEATLAKKRAREALERL 162


>ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|222864507|gb|EEF01638.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  156 bits (395), Expect = 2e-35
 Identities = 84/183 (45%), Positives = 120/183 (65%), Gaps = 9/183 (4%)
 Frame = +1

Query: 244 KRDTPSECSGCNLTERWLLHNVCMREV-YRRLCTSCVLKLHSGSFCPICFQVYDSGPNNA 420
           +RD   EC  C   +R+LLHNV  R   YRRLCT+C+LK H G FCP CF VY+    N 
Sbjct: 4   ERDHQFECGICGTQDRYLLHNVRHRTPSYRRLCTNCLLKDHRGLFCPFCFIVYEEPLQN- 62

Query: 421 PIERVICLRCPSITHKECVTKDVINS--YICPPCANPNFTFFDTSR-----SGKEIELSG 579
             +R +C +CPSI HK C+  +  +   +ICP C++PNF+FF+ +R     SG+ I+   
Sbjct: 63  --DRSMCNKCPSIAHKPCIPSNYPHHTPFICPSCSSPNFSFFNPTRNGDSSSGRFIDKDS 120

Query: 580 SKVFLAAARIASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEVNAIVL-GNEKSEK 756
           ++  +AAA+IAS+SM++AA LARV+AE++V+EA  ++K A+EALE +  +    NE  E 
Sbjct: 121 ARALVAAAKIASISMTKAAALARVEAEKRVKEATYAKKRAREALERLAYLAAKENEMMED 180

Query: 757 IKG 765
           IKG
Sbjct: 181 IKG 183


>ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|222852583|gb|EEE90130.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  154 bits (388), Expect = 1e-34
 Identities = 81/183 (44%), Positives = 122/183 (66%), Gaps = 8/183 (4%)
 Frame = +1

Query: 244 KRDTPSECSGCNLTERWLLHNVCMREV-YRRLCTSCVLKLHSGSFCPICFQVYDSGPNNA 420
           +RD   EC  C   +R+LLHNV  R   YRRLCT+C+LK H G FCP CF VY+      
Sbjct: 4   ERDHQFECGICGAEDRYLLHNVRHRTPSYRRLCTNCLLKDHRGLFCPFCFSVYEEP---L 60

Query: 421 PIERVICLRCPSITHKECVTKDVINS--YICPPCANPNFTFFDT-----SRSGKEIELSG 579
           PI+R +C +CPSI+HK C+  +  +   +ICP C++PNF+FF+      S SG+ I+   
Sbjct: 61  PIDRSMCNKCPSISHKPCIPSNYPHHTPFICPSCSSPNFSFFNPTTNGDSPSGRIIDRDS 120

Query: 580 SKVFLAAARIASVSMSRAAGLARVDAERKVREAMVSRKNAKEALEEVNAIVLGNEKSEKI 759
           ++  +AAA+IA+VSM++AA +A+V+AE++V+EA  ++K A+EALE +    L  ++ E +
Sbjct: 121 ARALVAAAKIAAVSMTKAAAMAKVEAEKRVKEATYAKKRAREALERL--AYLAAKEKEIM 178

Query: 760 KGK 768
           +GK
Sbjct: 179 EGK 181


Top