BLASTX nr result

ID: Coptis21_contig00002243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002243
         (1888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription...   232   3e-58
gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]    229   1e-57
ref|XP_002263305.2| PREDICTED: ethylene-responsive transcription...   226   2e-56
gb|ABU86872.1| dehydrate responsive element-binding protein [Pop...   220   9e-55
ref|XP_002310574.1| AP2/ERF domain-containing transcription fact...   219   3e-54

>ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
            [Vitis vinifera]
          Length = 374

 Score =  232 bits (591), Expect = 3e-58
 Identities = 149/328 (45%), Positives = 165/328 (50%), Gaps = 4/328 (1%)
 Frame = +2

Query: 461  REELMVALHPFIKSASSNKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 640
            REELM AL PF+K ASS                                           
Sbjct: 18   REELMKALEPFMKGASSTSSLTSPYPYPSTSSLSPPSTSSSSLPFFSYPPDSTQPNMYP- 76

Query: 641  XXXXXXLDYCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXX 820
                   D+CSTSTT MFSQGFS Y DQ+GLEQT SIGLNH+TP+               
Sbjct: 77   -------DFCSTSTTHMFSQGFSGY-DQMGLEQTRSIGLNHITPAQILQIQAQIQFQQQQ 128

Query: 821  XXXXXXXXXXXSFHXXXXXXXXXXXXXXNFLSPKAIPMKQVGISSKPTKLYRGVRQRHWG 1000
                       S                NFL PKAIPMKQVG   KP KLYRGVRQRHWG
Sbjct: 129  QQRMAAVATASSIQNQRLSQWQQQHNL-NFLGPKAIPMKQVGTPPKPAKLYRGVRQRHWG 187

Query: 1001 KWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGEVARLNFPHLRHQGSHIGGEF 1180
            KWVAEIRLP+NRTRLWLGTFDT               RGE ARLNFP+LRHQGS + GEF
Sbjct: 188  KWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEFARLNFPNLRHQGSLVAGEF 247

Query: 1181 GDYKPLHSSVDAKLEAICQSL----KHGNLSKSTVVSDAXXXXXXXXXXXXVDPPTLIKV 1348
            GDYKPLHSSVDAKL+AICQ+L    K GN  K  +V+DA            +        
Sbjct: 248  GDYKPLHSSVDAKLQAICQNLAISQKQGNSGKPGLVADAKIESSTHQAEMVL-------- 299

Query: 1349 DDDDDSSNGETCVLGSEDIKAENSFSLS 1432
               D+SS+ E+  LG ED K E S S S
Sbjct: 300  ---DNSSDPESGFLGLEDCKVEISSSSS 324


>gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]
          Length = 379

 Score =  229 bits (585), Expect = 1e-57
 Identities = 136/264 (51%), Positives = 150/264 (56%), Gaps = 8/264 (3%)
 Frame = +2

Query: 665  YCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXXXXXXXXXX 844
            +CSTSTT MFSQGF  Y DQ+GLEQTGSIGLNH+TP+                       
Sbjct: 78   FCSTSTTHMFSQGFLGY-DQMGLEQTGSIGLNHITPAQILQIQAQIQFQQQQQQRMAAVA 136

Query: 845  XXXSFHXXXXXXXXXXXXXX----NFLSPKAIPMKQVGISSKPTKLYRGVRQRHWGKWVA 1012
               S                    NFL PKAIPMKQVG   KP KLYRGVRQRHWGKWVA
Sbjct: 137  TASSIQNQRLSQWQQQQQQQQHTLNFLGPKAIPMKQVGTPPKPAKLYRGVRQRHWGKWVA 196

Query: 1013 EIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGEVARLNFPHLRHQGSHIGGEFGDYK 1192
            EIRLP+NRTRLWLGTFDT               RGE ARLNFP+LRHQGS + GEFGDYK
Sbjct: 197  EIRLPKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEFARLNFPNLRHQGSLVAGEFGDYK 256

Query: 1193 PLHSSVDAKLEAICQSL----KHGNLSKSTVVSDAXXXXXXXXXXXXVDPPTLIKVDDDD 1360
            PLHSSVDAKL+AICQ+L    K GN  K  +VSDA            +           D
Sbjct: 257  PLHSSVDAKLQAICQNLAISQKQGNSGKPGLVSDAKIESSTHQAEMVL-----------D 305

Query: 1361 DSSNGETCVLGSEDIKAENSFSLS 1432
            +SS+ E+  LG ED K E S S S
Sbjct: 306  NSSDPESGFLGLEDCKVEISSSSS 329


>ref|XP_002263305.2| PREDICTED: ethylene-responsive transcription factor RAP2-4-like,
            partial [Vitis vinifera]
          Length = 290

 Score =  226 bits (576), Expect = 2e-56
 Identities = 136/282 (48%), Positives = 149/282 (52%), Gaps = 8/282 (2%)
 Frame = +2

Query: 461  REELMVALHPFIKSASSNKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 640
            REELM AL PF+K ASS                                           
Sbjct: 18   REELMKALEPFMKGASSTSSLTSPYPYPSTSSLSPPSTSSSSLPFFSYPPDSTQPNMYP- 76

Query: 641  XXXXXXLDYCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXX 820
                   D+CSTSTT +FSQGFS Y DQ+GLEQTGSIGLNH+TP+               
Sbjct: 77   -------DFCSTSTTHVFSQGFSGY-DQMGLEQTGSIGLNHITPAQILQIQAQIQFQQQQ 128

Query: 821  XXXXXXXXXXXSFHXXXXXXXXXXXXXX----NFLSPKAIPMKQVGISSKPTKLYRGVRQ 988
                       S                    NFL PKAIPMKQVG   KP KLYRGVRQ
Sbjct: 129  QQRMAAVATASSIQNQRLSQWQQQQQQQQHTLNFLGPKAIPMKQVGTPPKPAKLYRGVRQ 188

Query: 989  RHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGEVARLNFPHLRHQGSHI 1168
            RHWGKWVAEIRLP+NRTRLWLGTFDT               RGE ARLNFP+LRHQGS +
Sbjct: 189  RHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEFARLNFPNLRHQGSLV 248

Query: 1169 GGEFGDYKPLHSSVDAKLEAICQSL----KHGNLSKSTVVSD 1282
             GEFGDYKPLHSSVDAKL+AICQ+L    K GN  K+ +VSD
Sbjct: 249  AGEFGDYKPLHSSVDAKLQAICQNLAISQKQGNSRKACLVSD 290


>gb|ABU86872.1| dehydrate responsive element-binding protein [Populus euphratica]
          Length = 375

 Score =  220 bits (561), Expect = 9e-55
 Identities = 143/337 (42%), Positives = 166/337 (49%), Gaps = 8/337 (2%)
 Frame = +2

Query: 428  NSGSNMFMDPLREELMVALHPFIKSASSNKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 607
            N+ + +F DP REELM AL PF+KSAS                                 
Sbjct: 9    NTTAPVFSDPCREELMKALEPFMKSASP-----------PPTSTYSSPSPSTSPPFSSYP 57

Query: 608  XXXXXXXXXXXXXXXXXLDYCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXX 787
                             L +CS ++T MFS GF  YN Q+G EQTG IGLNHLTPS    
Sbjct: 58   SCFYNNNSPISSYPNLDLSFCSPTSTQMFSNGFLDYN-QMGFEQTGPIGLNHLTPSQILQ 116

Query: 788  XXXXXXXXXXXXXXXXXXXXXXSFHXXXXXXXXXXXXXXNFLSPKAIPMKQVGIS-SKPT 964
                                  S                N+L+PK +PMKQ G S  KPT
Sbjct: 117  IQAKIHFQQQQQQQKMENLATTS-------QCVHNRKASNYLAPKPVPMKQSGASPQKPT 169

Query: 965  KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGEVARLNFPH 1144
            KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGT+DT               RGE ARLNFPH
Sbjct: 170  KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTYDTAEEAALAYDNAAYKLRGEYARLNFPH 229

Query: 1145 LRHQGSHIGGEFGDYKPLHSSVDAKLEAICQSL---KHGNLSKSTVVSDAXXXXXXXXXX 1315
            LRHQG+H+ GEFGDYKPLHSSVDAKL+AICQSL   K G   + + V+++          
Sbjct: 230  LRHQGAHVSGEFGDYKPLHSSVDAKLQAICQSLGLQKQGKTREPSSVANS---------K 280

Query: 1316 XXVDPPTLIKVDDDDDSSNGETCV----LGSEDIKAE 1414
                 P   K+ +DD S  GE        G ED K E
Sbjct: 281  KTATAPLQAKI-EDDCSMRGELKTEYENFGVEDYKVE 316


>ref|XP_002310574.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|118486817|gb|ABK95243.1| unknown [Populus trichocarpa]
            gi|222853477|gb|EEE91024.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 373

 Score =  219 bits (557), Expect = 3e-54
 Identities = 143/337 (42%), Positives = 165/337 (48%), Gaps = 8/337 (2%)
 Frame = +2

Query: 428  NSGSNMFMDPLREELMVALHPFIKSASSNKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 607
            N+   +F DP R ELM AL PF+KSAS +                               
Sbjct: 9    NTTVPVFSDPCRGELMEALEPFMKSASPSP---------ASTSYSSQSPSTSSYSFSSYP 59

Query: 608  XXXXXXXXXXXXXXXXXLDYCSTSTTPMFSQGFSTYNDQLGLEQTGSIGLNHLTPSXXXX 787
                             L++ + ++T MFS GFS YN Q+G EQTG IGLNHLTPS    
Sbjct: 60   SCYHNNCFPVTSHPNLDLNFYTPTSTQMFSNGFSGYN-QMGFEQTGPIGLNHLTPSQILQ 118

Query: 788  XXXXXXXXXXXXXXXXXXXXXXSFHXXXXXXXXXXXXXXNFLSPKAIPMKQVGISS--KP 961
                                  S                NFL+PK +PMKQ   S   KP
Sbjct: 119  IQAKIHLQQQQQQQQMANHAPTS-------QLVHNQRTSNFLAPKPVPMKQQSASPPPKP 171

Query: 962  TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGEVARLNFP 1141
            TKLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDT               RGE ARLNFP
Sbjct: 172  TKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFP 231

Query: 1142 HLRHQGSHIGGEFGDYKPLHSSVDAKLEAICQSL---KHGNLSKSTVVSDAXXXXXXXXX 1312
            HLRHQG+H+ GEFGDYKPLHSSVDAKL+AICQSL   K G   +   VSD+         
Sbjct: 232  HLRHQGAHVSGEFGDYKPLHSSVDAKLQAICQSLGLQKQGETGEPCSVSDS--------- 282

Query: 1313 XXXVDPPTLIKVDDD---DDSSNGETCVLGSEDIKAE 1414
               V  P  +K++DD         E   LG E+ K E
Sbjct: 283  KKTVSAPLQVKIEDDCSLQGELKREFENLGVEEFKVE 319


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