BLASTX nr result

ID: Coptis21_contig00002222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002222
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138960.1| PREDICTED: uncharacterized protein LOC101214...    75   7e-12
ref|XP_003551379.1| PREDICTED: uncharacterized protein LOC100305...    74   2e-11
ref|NP_189052.2| uncharacterized protein [Arabidopsis thaliana] ...    74   2e-11
gb|ABK93321.1| unknown [Populus trichocarpa]                           73   3e-11
gb|AFX67001.1| 4F5 protein family protein [Solanum tuberosum]          71   8e-11

>ref|XP_004138960.1| PREDICTED: uncharacterized protein LOC101214231 [Cucumis sativus]
           gi|449526243|ref|XP_004170123.1| PREDICTED:
           uncharacterized protein LOC101231850 [Cucumis sativus]
          Length = 68

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/42 (90%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
 Frame = -3

Query: 394 MTRGNQREKDRERAAARTGGKNK-KDDGLTPEQRRERDAKAL 272
           MTRGNQREKDRERA AR GGK K KDDGLTPEQRRERDAKAL
Sbjct: 1   MTRGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKAL 42


>ref|XP_003551379.1| PREDICTED: uncharacterized protein LOC100305502 [Glycine max]
          Length = 82

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/51 (72%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = -3

Query: 421 IFLWCS*KNMTRGNQREKDRERAAARTGGKNK-KDDGLTPEQRRERDAKAL 272
           + LW    +  RGNQR++DRERA ARTGGK K KDDGLTPEQRRERDAKAL
Sbjct: 13  LLLWKQSSSGARGNQRDRDRERAQARTGGKGKQKDDGLTPEQRRERDAKAL 63


>ref|NP_189052.2| uncharacterized protein [Arabidopsis thaliana]
           gi|13878137|gb|AAK44146.1|AF370331_1 unknown protein
           [Arabidopsis thaliana] gi|23296709|gb|AAN13152.1|
           unknown protein [Arabidopsis thaliana]
           gi|332643336|gb|AEE76857.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 69

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/42 (88%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
 Frame = -3

Query: 394 MTRGNQREKDRERAAARTGGKNK-KDDGLTPEQRRERDAKAL 272
           MTRG+QRE+DRERA ARTGGK K KDDGLTPEQRRERDAKAL
Sbjct: 1   MTRGSQRERDRERALARTGGKGKNKDDGLTPEQRRERDAKAL 42


>gb|ABK93321.1| unknown [Populus trichocarpa]
          Length = 68

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/42 (88%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = -3

Query: 394 MTRGNQREKDRERAAARTGGKNK-KDDGLTPEQRRERDAKAL 272
           M RGNQREKDRERA AR GGK K KDDGLTPEQRRERDAKAL
Sbjct: 1   MARGNQREKDRERAQARNGGKGKNKDDGLTPEQRRERDAKAL 42


>gb|AFX67001.1| 4F5 protein family protein [Solanum tuberosum]
          Length = 67

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/42 (88%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = -3

Query: 394 MTRGNQREKDRERAAARTG-GKNKKDDGLTPEQRRERDAKAL 272
           MTRGNQREKDRERAAAR G GK   DDGLTPEQRRERDAKAL
Sbjct: 1   MTRGNQREKDRERAAARAGKGKKGGDDGLTPEQRRERDAKAL 42


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