BLASTX nr result

ID: Coptis21_contig00002206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002206
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274031.1| PREDICTED: arogenate dehydrogenase 1, chloro...   310   2e-82
ref|XP_002312190.1| predicted protein [Populus trichocarpa] gi|2...   309   4e-82
ref|XP_003601003.1| Arogenate dehydrogenase [Medicago truncatula...   291   8e-77
ref|XP_003601005.1| Arogenate dehydrogenase [Medicago truncatula...   289   5e-76
ref|XP_002520806.1| prephenate dehydrogenase, putative [Ricinus ...   288   7e-76

>ref|XP_002274031.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic [Vitis
           vinifera] gi|297736539|emb|CBI25410.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  310 bits (795), Expect = 2e-82
 Identities = 146/223 (65%), Positives = 180/223 (80%)
 Frame = +3

Query: 102 MSGTSSFSMKLKVGIVGFGPFAQFLAKTMIKQGHTLTATSRSDHSEICSQLGIKFFKDIV 281
           +S +S  S  L++GIVGFGPF QFLAKTM+KQGHTLTATSRSDHS++C++LGI FF+ + 
Sbjct: 3   VSSSSPLSRTLRIGIVGFGPFGQFLAKTMMKQGHTLTATSRSDHSQLCARLGISFFRGMN 62

Query: 282 PFLDSNNDVXXXXXXXXXXXXXXXXXPFHVLKKPTLFVDVLSVKEYPRQLFLQVLPEEAD 461
            F+++ NDV                 P H LK+PTLF DVLSVKE PR++ LQVLPEE+D
Sbjct: 63  EFIEAENDVIMLCTSILSLTEVLESLPLHCLKRPTLFADVLSVKEGPREVLLQVLPEESD 122

Query: 462 LLCTHPMFGPVNGKDGWEGLAFMYERVRIKNEDTCSSFLHIFQNEGCRMVEMSCEEHDKQ 641
           +LCTHPMFGP +G+DGW GLAFMYERVRI++E TCSSFLHIF++EGCRM+EMSCEEHDK 
Sbjct: 123 VLCTHPMFGPESGRDGWNGLAFMYERVRIRDEATCSSFLHIFESEGCRMLEMSCEEHDKL 182

Query: 642 AARSQFLTHTIGRMLSEMDITSTSVNTKGFETLIHLKDDIVKN 770
           AARSQFLTHTIGR+LSEM+I  T ++TKGF+TLI LKD  +++
Sbjct: 183 AARSQFLTHTIGRILSEMEIEPTPIDTKGFQTLIQLKDSTIRD 225


>ref|XP_002312190.1| predicted protein [Populus trichocarpa] gi|222852010|gb|EEE89557.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  309 bits (792), Expect = 4e-82
 Identities = 152/230 (66%), Positives = 178/230 (77%)
 Frame = +3

Query: 81  SSHKYTTMSGTSSFSMKLKVGIVGFGPFAQFLAKTMIKQGHTLTATSRSDHSEICSQLGI 260
           SS   ++ S +SS S  LK+GIVGFGPFAQFLAK MIKQGHTL ATSRSDHS +C  LGI
Sbjct: 5   SSSSSSSSSSSSSPSRNLKIGIVGFGPFAQFLAKIMIKQGHTLRATSRSDHSSLCQDLGI 64

Query: 261 KFFKDIVPFLDSNNDVXXXXXXXXXXXXXXXXXPFHVLKKPTLFVDVLSVKEYPRQLFLQ 440
            FF+D   FL++NNDV                 P H LK+  LFVDVLSVKEYPR + L+
Sbjct: 65  SFFRDTGTFLEANNDVILICTSILSLSKVLNTMPLHCLKRSPLFVDVLSVKEYPRDILLK 124

Query: 441 VLPEEADLLCTHPMFGPVNGKDGWEGLAFMYERVRIKNEDTCSSFLHIFQNEGCRMVEMS 620
           VLPEE D+LCTHPMFGP +GK+GW+ LAFMYERVRIK+E TCSSFL IF+ EGCRM+EMS
Sbjct: 125 VLPEELDVLCTHPMFGPESGKNGWKDLAFMYERVRIKDEATCSSFLRIFETEGCRMLEMS 184

Query: 621 CEEHDKQAARSQFLTHTIGRMLSEMDITSTSVNTKGFETLIHLKDDIVKN 770
           CEEHD  AARSQFLTHTIGR+LSEM++  TS++TKGFETLIHLK+  +K+
Sbjct: 185 CEEHDMVAARSQFLTHTIGRILSEMEVKPTSMSTKGFETLIHLKESTMKD 234


>ref|XP_003601003.1| Arogenate dehydrogenase [Medicago truncatula]
           gi|355490051|gb|AES71254.1| Arogenate dehydrogenase
           [Medicago truncatula]
          Length = 268

 Score =  291 bits (746), Expect = 8e-77
 Identities = 138/217 (63%), Positives = 171/217 (78%)
 Frame = +3

Query: 114 SSFSMKLKVGIVGFGPFAQFLAKTMIKQGHTLTATSRSDHSEICSQLGIKFFKDIVPFLD 293
           SS S  LK+GIVGFG F QFLA TMIKQGHTLTATSR+D+S++C Q+GI FF+DI  FLD
Sbjct: 2   SSSSKSLKIGIVGFGTFGQFLANTMIKQGHTLTATSRTDYSQLCDQMGIHFFRDITAFLD 61

Query: 294 SNNDVXXXXXXXXXXXXXXXXXPFHVLKKPTLFVDVLSVKEYPRQLFLQVLPEEADLLCT 473
           ++ DV                 P   LK+PTLFVDVLSVKE+P+ L L+VLPEE+D+LCT
Sbjct: 62  ADMDVILLCTSISSLSEVVGSMPLACLKRPTLFVDVLSVKEHPKNLLLKVLPEESDILCT 121

Query: 474 HPMFGPVNGKDGWEGLAFMYERVRIKNEDTCSSFLHIFQNEGCRMVEMSCEEHDKQAARS 653
           HPMFGPV+GK+GW+ L FM+++VRIK+E TCS FL IF +EGC+MVEMSCEEHDK AA+S
Sbjct: 122 HPMFGPVSGKNGWQNLTFMFDKVRIKDEVTCSKFLQIFASEGCKMVEMSCEEHDKAAAKS 181

Query: 654 QFLTHTIGRMLSEMDITSTSVNTKGFETLIHLKDDIV 764
           QF+THTIGR L+EMDI ST ++TKGF+TL+ LK  ++
Sbjct: 182 QFITHTIGRTLAEMDIKSTPIDTKGFQTLVELKKPVM 218


>ref|XP_003601005.1| Arogenate dehydrogenase [Medicago truncatula]
           gi|355490053|gb|AES71256.1| Arogenate dehydrogenase
           [Medicago truncatula]
          Length = 217

 Score =  289 bits (739), Expect = 5e-76
 Identities = 137/212 (64%), Positives = 168/212 (79%)
 Frame = +3

Query: 114 SSFSMKLKVGIVGFGPFAQFLAKTMIKQGHTLTATSRSDHSEICSQLGIKFFKDIVPFLD 293
           SS S  LK+GIVGFG F QFLA TMIKQGHTLTATSR+D+S++C Q+GI FF+DI  FLD
Sbjct: 2   SSSSKSLKIGIVGFGTFGQFLANTMIKQGHTLTATSRTDYSQLCDQMGIHFFRDITAFLD 61

Query: 294 SNNDVXXXXXXXXXXXXXXXXXPFHVLKKPTLFVDVLSVKEYPRQLFLQVLPEEADLLCT 473
           ++ DV                 P   LK+PTLFVDVLSVKE+P+ L L+VLPEE+D+LCT
Sbjct: 62  ADMDVILLCTSISSLSEVVGSMPLACLKRPTLFVDVLSVKEHPKNLLLKVLPEESDILCT 121

Query: 474 HPMFGPVNGKDGWEGLAFMYERVRIKNEDTCSSFLHIFQNEGCRMVEMSCEEHDKQAARS 653
           HPMFGPV+GK+GW+ L FM+++VRIK+E TCS FL IF +EGC+MVEMSCEEHDK AA+S
Sbjct: 122 HPMFGPVSGKNGWQNLTFMFDKVRIKDEVTCSKFLQIFASEGCKMVEMSCEEHDKAAAKS 181

Query: 654 QFLTHTIGRMLSEMDITSTSVNTKGFETLIHL 749
           QF+THTIGR L+EMDI ST ++TKGF+TL+ L
Sbjct: 182 QFITHTIGRTLAEMDIKSTPIDTKGFQTLVEL 213


>ref|XP_002520806.1| prephenate dehydrogenase, putative [Ricinus communis]
           gi|223539937|gb|EEF41515.1| prephenate dehydrogenase,
           putative [Ricinus communis]
          Length = 345

 Score =  288 bits (738), Expect = 7e-76
 Identities = 136/221 (61%), Positives = 171/221 (77%), Gaps = 1/221 (0%)
 Frame = +3

Query: 111 TSSFSMKLKVGIVGFGPFAQFLAKTMIKQGHTLTATSRSDHSEICSQLGIKFFKDIVPFL 290
           +S+    LK+GI+GFG F QFLAKTMIKQGHTL ATSRSDHS +C  LGI +F+D++ FL
Sbjct: 6   SSTTRRSLKIGIIGFGRFGQFLAKTMIKQGHTLRATSRSDHSHLCEDLGISYFRDVIKFL 65

Query: 291 DSNNDVXXXXXXXXXXXXXXXXXPFHVLKKP-TLFVDVLSVKEYPRQLFLQVLPEEADLL 467
           +++NDV                 P H LK+  TLF DVLSVKEYPR +  +VLPEE+D+L
Sbjct: 66  EADNDVILICTSILSLQEVLNSMPLHSLKRQRTLFADVLSVKEYPRDVLTKVLPEESDIL 125

Query: 468 CTHPMFGPVNGKDGWEGLAFMYERVRIKNEDTCSSFLHIFQNEGCRMVEMSCEEHDKQAA 647
           CTHPMFGP +GK GW+ LAF+Y++VR+++E TCSSFL IF+ EGCRM+EMSCEEHD+ AA
Sbjct: 126 CTHPMFGPESGKHGWKDLAFVYDKVRVRDEATCSSFLKIFETEGCRMLEMSCEEHDRMAA 185

Query: 648 RSQFLTHTIGRMLSEMDITSTSVNTKGFETLIHLKDDIVKN 770
           +SQFLTHTIGR+ SEM+I ST ++TKGFETL+ LKDD  K+
Sbjct: 186 KSQFLTHTIGRIFSEMEIKSTPMSTKGFETLVRLKDDTTKD 226


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