BLASTX nr result

ID: Coptis21_contig00002205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002205
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27999.3| unnamed protein product [Vitis vinifera]               87   4e-15
ref|XP_002283637.1| PREDICTED: mitochondrial import inner membra...    87   4e-15
ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-14
gb|ABA81866.1| unknown [Solanum tuberosum]                             85   2e-14
ref|XP_003562729.1| PREDICTED: mitochondrial import inner membra...    85   2e-14

>emb|CBI27999.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 43/86 (50%), Positives = 58/86 (67%)
 Frame = -3

Query: 589 VGTVYGSAVNMVKGALVSPDGERLVGGFKAVRLNVPRVGGTFAAWTALYFATKSSMEFVR 410
           +G V GSA + +KG   SP GER++GG +AVR+N PRVGG+FA W  L+ A   +M +VR
Sbjct: 25  MGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAPRVGGSFAVWGGLFSAFDCTMVYVR 84

Query: 409 QKKDPLNSFTAVGAASACLQLPKGLS 332
           QK+DP NS  A  A    LQ+ +GL+
Sbjct: 85  QKEDPWNSIIAGAATGGFLQMRQGLA 110


>ref|XP_002283637.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Vitis vinifera]
          Length = 226

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 43/86 (50%), Positives = 58/86 (67%)
 Frame = -3

Query: 589 VGTVYGSAVNMVKGALVSPDGERLVGGFKAVRLNVPRVGGTFAAWTALYFATKSSMEFVR 410
           +G V GSA + +KG   SP GER++GG +AVR+N PRVGG+FA W  L+ A   +M +VR
Sbjct: 25  MGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAPRVGGSFAVWGGLFSAFDCTMVYVR 84

Query: 409 QKKDPLNSFTAVGAASACLQLPKGLS 332
           QK+DP NS  A  A    LQ+ +GL+
Sbjct: 85  QKEDPWNSIIAGAATGGFLQMRQGLA 110


>ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|222870555|gb|EEF07686.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 42/85 (49%), Positives = 55/85 (64%)
 Frame = -3

Query: 589 VGTVYGSAVNMVKGALVSPDGERLVGGFKAVRLNVPRVGGTFAAWTALYFATKSSMEFVR 410
           +G V GSA + +KG   SP G RL+GG +AVR+N PRVGG+FA W  L+ A   SM ++R
Sbjct: 25  MGAVGGSAFHFIKGVYNSPSGTRLIGGTQAVRMNAPRVGGSFAVWGGLFSAFDCSMVYLR 84

Query: 409 QKKDPLNSFTAVGAASACLQLPKGL 335
           QK+DP NS  A  A    L + +GL
Sbjct: 85  QKEDPWNSIIAGAATGGFLSMRQGL 109


>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 41/85 (48%), Positives = 56/85 (65%)
 Frame = -3

Query: 589 VGTVYGSAVNMVKGALVSPDGERLVGGFKAVRLNVPRVGGTFAAWTALYFATKSSMEFVR 410
           +G V GSA + +KG   SP GERL+GG +AVR+N PR+GG+FA W  L+     +M ++R
Sbjct: 25  MGAVGGSAFHFLKGIYNSPKGERLIGGTQAVRMNAPRIGGSFAVWGGLFSTFDCTMVYLR 84

Query: 409 QKKDPLNSFTAVGAASACLQLPKGL 335
           QK+DP NS  A  A    LQ+ +GL
Sbjct: 85  QKEDPWNSIIAGAATGGFLQMRQGL 109


>ref|XP_003562729.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Brachypodium distachyon]
          Length = 232

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 42/85 (49%), Positives = 56/85 (65%)
 Frame = -3

Query: 589 VGTVYGSAVNMVKGALVSPDGERLVGGFKAVRLNVPRVGGTFAAWTALYFATKSSMEFVR 410
           +G V GS  + +KG   SP+GERL+GG +A+R+N PRVGG+FA W  L+ A   +M FVR
Sbjct: 25  MGAVGGSIFHFLKGTYNSPNGERLMGGAQAMRMNAPRVGGSFAVWGGLFSAFDCTMVFVR 84

Query: 409 QKKDPLNSFTAVGAASACLQLPKGL 335
           QK+DP NS  A  A    L + +GL
Sbjct: 85  QKEDPWNSIIAGAATGGFLSMRQGL 109


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