BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002200
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding pro...   384   e-104
gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]   371   e-100
gb|ABK24177.1| unknown [Picea sitchensis]                             340   4e-91
ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [S...   339   1e-90
ref|XP_002306137.1| predicted protein [Populus trichocarpa] gi|2...   338   2e-90

>ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
            gi|296086261|emb|CBI31702.3| unnamed protein product
            [Vitis vinifera]
          Length = 238

 Score =  384 bits (986), Expect = e-104
 Identities = 161/199 (80%), Positives = 178/199 (89%)
 Frame = -1

Query: 1040 RSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQC 861
            R +RQDYLC  CKRPGHFARDCPNV VCNNCGLPGHIAAECN+ TMCWNCKESGH+ASQC
Sbjct: 33   RVHRQDYLCNKCKRPGHFARDCPNVTVCNNCGLPGHIAAECNSTTMCWNCKESGHLASQC 92

Query: 860  KNEPICHVCGKVGHLARDCSGSGLPLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGHL 681
             N+P+CH+CGK+GHLARDCS  GLP HD+RLCNNCYKPGHIA DCTNEKACNNC KTGHL
Sbjct: 93   PNDPVCHMCGKMGHLARDCSSPGLPAHDARLCNNCYKPGHIAADCTNEKACNNCHKTGHL 152

Query: 680  ARECPNEPVCNLCNVAGHMARQCPKSSLASEIVGGPFRDILCRSCGQPGHISRDCVGIVI 501
            AR+C NEPVCN+CN++GH+ARQCPKS L  E  GGPFRDI C +CGQPGHISRDCV IVI
Sbjct: 153  ARDCLNEPVCNICNISGHVARQCPKSRLVPE-TGGPFRDITCHNCGQPGHISRDCVSIVI 211

Query: 500  CHNCGGRGHQAYECPSGRM 444
            C+NCGGRGHQ++ECPS RM
Sbjct: 212  CNNCGGRGHQSFECPSVRM 230


>gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
          Length = 244

 Score =  371 bits (953), Expect = e-100
 Identities = 154/199 (77%), Positives = 175/199 (87%)
 Frame = -1

Query: 1040 RSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQC 861
            R +RQD +CKNCKRPGHFARDC ++AVCNNCGLPGHIAAEC AKT+CWNCKE GH+A++C
Sbjct: 37   RGFRQDVICKNCKRPGHFARDCSHIAVCNNCGLPGHIAAECTAKTLCWNCKEPGHMANEC 96

Query: 860  KNEPICHVCGKVGHLARDCSGSGLPLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGHL 681
             NE +CH C K GHLARDCS SGL   D+RLCNNC++PGHIA DCTN+K CNNCRK GHL
Sbjct: 97   SNEAVCHNCNKTGHLARDCSASGLSSFDTRLCNNCHRPGHIAADCTNDKTCNNCRKPGHL 156

Query: 680  ARECPNEPVCNLCNVAGHMARQCPKSSLASEIVGGPFRDILCRSCGQPGHISRDCVGIVI 501
            AREC N+PVCN+CNV+GH+ARQCPKS+L SEI GGPFRDI+CR C QPGHISRDCVGIVI
Sbjct: 157  ARECTNDPVCNVCNVSGHVARQCPKSNLPSEIHGGPFRDIICRVCNQPGHISRDCVGIVI 216

Query: 500  CHNCGGRGHQAYECPSGRM 444
            C+ CGGRGH AYECPSGR+
Sbjct: 217  CNTCGGRGHMAYECPSGRL 235


>gb|ABK24177.1| unknown [Picea sitchensis]
          Length = 248

 Score =  340 bits (873), Expect = 4e-91
 Identities = 143/207 (69%), Positives = 164/207 (79%), Gaps = 8/207 (3%)
 Frame = -1

Query: 1040 RSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQC 861
            R  R D  CKNCKRPGHFARDCPNV+VCNNCGLPGHIA EC  K++CWNC+E GHVASQC
Sbjct: 34   RRSRSDDACKNCKRPGHFARDCPNVSVCNNCGLPGHIAVECTTKSLCWNCREPGHVASQC 93

Query: 860  KNEPICHVCGKVGHLARDCSGSGLPLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGHL 681
             N+PICH CGK GHL+RDC+   LP  D RLCNNCYK GHIA +CTNEKACNNCRKTGHL
Sbjct: 94   SNDPICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECTNEKACNNCRKTGHL 153

Query: 680  ARECPNEPVCNLCNVAGHMARQCPKSSLASEIVG--------GPFRDILCRSCGQPGHIS 525
            AR+C N PVCNLCN++GH+AR+CPK  +  +  G        G F DI+CR+C +PGH S
Sbjct: 154  ARDCTNSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIICRTCNEPGHTS 213

Query: 524  RDCVGIVICHNCGGRGHQAYECPSGRM 444
            R+C  I+ICHNCGGRGH AYECPSGR+
Sbjct: 214  RECTPILICHNCGGRGHVAYECPSGRV 240



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 37/103 (35%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
 Frame = -1

Query: 1016 CKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNA---------------------KTMC 900
            C NC++ GH ARDC N  VCN C + GH+A EC                         +C
Sbjct: 144  CNNCRKTGHLARDCTNSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIIC 203

Query: 899  WNCKESGHVASQCKNEPICHVCGKVGHLARDCSGSGLPLHDSR 771
              C E GH + +C    ICH CG  GH+A +C    + L D R
Sbjct: 204  RTCNEPGHTSRECTPILICHNCGGRGHVAYECPSGRVMLRDMR 246


>ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
            gi|241917482|gb|EER90626.1| hypothetical protein
            SORBIDRAFT_01g003240 [Sorghum bicolor]
          Length = 258

 Score =  339 bits (869), Expect = 1e-90
 Identities = 140/200 (70%), Positives = 167/200 (83%)
 Frame = -1

Query: 1043 RRSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQ 864
            RR YR D +CKNC+RPGHFA++CP+   CNNC LPGH AAEC ++T+CWNCKESGH+AS+
Sbjct: 55   RRGYR-DLVCKNCRRPGHFAKECPSAPTCNNCNLPGHFAAECTSQTICWNCKESGHIASE 113

Query: 863  CKNEPICHVCGKVGHLARDCSGSGLPLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKTGH 684
            CKNE +CH C K GHLARDC  SG  +   +LCN C+KPGH AVDCTNE+ACNNCR+ GH
Sbjct: 114  CKNEALCHTCNKTGHLARDCPTSGANV---KLCNKCFKPGHFAVDCTNERACNNCRQPGH 170

Query: 683  LARECPNEPVCNLCNVAGHMARQCPKSSLASEIVGGPFRDILCRSCGQPGHISRDCVGIV 504
            +AREC N+PVCNLCNV+GH+AR CPK++LASEI GGPFRDILCR CGQPGHISR+C+  +
Sbjct: 171  IARECKNDPVCNLCNVSGHVARVCPKTTLASEIQGGPFRDILCRICGQPGHISRNCIATI 230

Query: 503  ICHNCGGRGHQAYECPSGRM 444
            IC  CGGRGH +YECPS R+
Sbjct: 231  ICDTCGGRGHMSYECPSARI 250


>ref|XP_002306137.1| predicted protein [Populus trichocarpa] gi|222849101|gb|EEE86648.1|
            predicted protein [Populus trichocarpa]
          Length = 242

 Score =  338 bits (866), Expect = 2e-90
 Identities = 143/206 (69%), Positives = 172/206 (83%), Gaps = 6/206 (2%)
 Frame = -1

Query: 1043 RRSYR--QDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVA 870
            RR YR  Q  LCKNCKRPGH+AR+CPNVA+C+NCGLPGHIA+EC  K++CWNC+E GH+A
Sbjct: 28   RRGYRFLQSNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA 87

Query: 869  SQCKNEPICHVCGKVGHLARDCSGSGLPLHDSRLCNNCYKPGHIAVDCTNEKACNNCRKT 690
            S C NE ICH CGK GH A++C+   +P  D RLCNNCYK GHIA DCTN+KACNNCRKT
Sbjct: 88   SNCPNEGICHTCGKAGHRAKECTAPPMPPGDLRLCNNCYKQGHIAADCTNDKACNNCRKT 147

Query: 689  GHLARECPNEPVCNLCNVAGHMARQCPKSSLASEIVG---GPFRDILCRSCGQPGHISRD 519
            GHLARECPNEP+CN+CNVAGH+ARQCPKS++  +  G   G ++DI+CR+C Q GH+SRD
Sbjct: 148  GHLARECPNEPICNMCNVAGHVARQCPKSNMLGDRGGMRSGGYQDIVCRNCHQYGHMSRD 207

Query: 518  CVG-IVICHNCGGRGHQAYECPSGRM 444
            C+G ++ICHNCGGRGH+A ECPSGRM
Sbjct: 208  CMGPLMICHNCGGRGHRAIECPSGRM 233



 Score =  101 bits (251), Expect = 5e-19
 Identities = 52/136 (38%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
 Frame = -1

Query: 803 SGSGLPLHDSRLCNNCYK-------------------PGHIAVDCTNEKACNNCRKTGHL 681
           S  G     S LC NC +                   PGHIA +CT +  C NCR+ GH+
Sbjct: 27  SRRGYRFLQSNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHM 86

Query: 680 ARECPNEPVCNLCNVAGHMARQCPKSSLASEIVGGPFRDILCRSCGQPGHISRDCVGIVI 501
           A  CPNE +C+ C  AGH A++C     A  +  G  R  LC +C + GHI+ DC     
Sbjct: 87  ASNCPNEGICHTCGKAGHRAKEC----TAPPMPPGDLR--LCNNCYKQGHIAADCTNDKA 140

Query: 500 CHNCGGRGHQAYECPS 453
           C+NC   GH A ECP+
Sbjct: 141 CNNCRKTGHLARECPN 156