BLASTX nr result

ID: Coptis21_contig00002199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002199
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277196.2| PREDICTED: uncharacterized protein LOC100243...   125   4e-27
emb|CBI27736.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002516180.1| electron transporter, putative [Ricinus comm...   123   2e-26
emb|CAN66774.1| hypothetical protein VITISV_006776 [Vitis vinifera]   111   7e-23
ref|XP_002308502.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22

>ref|XP_002277196.2| PREDICTED: uncharacterized protein LOC100243916 [Vitis vinifera]
          Length = 580

 Score =  125 bits (314), Expect = 4e-27
 Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 5/144 (3%)
 Frame = +3

Query: 3   IQRYLRK-GKSWKYPSPVPVSLNASPATCSSGPLLLDDEDPKASDGKQRSRKTRSL---- 167
           I RYLRK G+   + S    S +   +  SSG   L+D  P   +  Q SR    L    
Sbjct: 32  IHRYLRKNGRGGSHHS---FSSSGDGSGTSSG---LEDRKPWERESSQESRGRTCLYKFQ 85

Query: 168 LEQDITALQKQLEEEIDLHLALASAVDHSNATFSNSIGQLPDKAQELVTNIAVLEITVSK 347
           LEQD+  LQKQL+EEIDL+LALASA +HS++ FS+S  QLP KAQEL+ +IAVLEITVSK
Sbjct: 86  LEQDVKELQKQLQEEIDLNLALASAAEHSSSPFSDSF-QLPAKAQELLDSIAVLEITVSK 144

Query: 348 LEEELVALHFQLSQERNERRLAEY 419
           LE++LVAL++QL+QERNERRL+EY
Sbjct: 145 LEQKLVALNYQLTQERNERRLSEY 168


>emb|CBI27736.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  125 bits (314), Expect = 4e-27
 Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 5/144 (3%)
 Frame = +3

Query: 3   IQRYLRK-GKSWKYPSPVPVSLNASPATCSSGPLLLDDEDPKASDGKQRSRKTRSL---- 167
           I RYLRK G+   + S    S +   +  SSG   L+D  P   +  Q SR    L    
Sbjct: 32  IHRYLRKNGRGGSHHS---FSSSGDGSGTSSG---LEDRKPWERESSQESRGRTCLYKFQ 85

Query: 168 LEQDITALQKQLEEEIDLHLALASAVDHSNATFSNSIGQLPDKAQELVTNIAVLEITVSK 347
           LEQD+  LQKQL+EEIDL+LALASA +HS++ FS+S  QLP KAQEL+ +IAVLEITVSK
Sbjct: 86  LEQDVKELQKQLQEEIDLNLALASAAEHSSSPFSDSF-QLPAKAQELLDSIAVLEITVSK 144

Query: 348 LEEELVALHFQLSQERNERRLAEY 419
           LE++LVAL++QL+QERNERRL+EY
Sbjct: 145 LEQKLVALNYQLTQERNERRLSEY 168


>ref|XP_002516180.1| electron transporter, putative [Ricinus communis]
           gi|223544666|gb|EEF46182.1| electron transporter,
           putative [Ricinus communis]
          Length = 589

 Score =  123 bits (308), Expect = 2e-26
 Identities = 68/122 (55%), Positives = 89/122 (72%), Gaps = 6/122 (4%)
 Frame = +3

Query: 72  SPATCSSGPLLLDDEDPKASDGKQRSRKTRSL------LEQDITALQKQLEEEIDLHLAL 233
           S ++    P + D ED K  D +    K  ++      LE+D+  LQ+QL+EEIDL LAL
Sbjct: 60  SISSADGSPSISDLEDTKPLDKRSGQLKGGNMSLYRYQLEEDVKKLQQQLQEEIDLRLAL 119

Query: 234 ASAVDHSNATFSNSIGQLPDKAQELVTNIAVLEITVSKLEEELVALHFQLSQERNERRLA 413
           ASAV+HSN++FS+S  QLPDKAQEL+ +IA+LEI VSKLE+E V+L ++LSQERNERRLA
Sbjct: 120 ASAVEHSNSSFSSSPYQLPDKAQELLDSIAILEIAVSKLEQESVSLQYELSQERNERRLA 179

Query: 414 EY 419
           EY
Sbjct: 180 EY 181


>emb|CAN66774.1| hypothetical protein VITISV_006776 [Vitis vinifera]
          Length = 1031

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/91 (64%), Positives = 77/91 (84%)
 Frame = +3

Query: 147 SRKTRSLLEQDITALQKQLEEEIDLHLALASAVDHSNATFSNSIGQLPDKAQELVTNIAV 326
           ++ T S+    +  LQKQL+EEIDL+LALASA +HS++ FS+S  QLP KAQEL+ +IAV
Sbjct: 487 NKATISIAHNPVKELQKQLQEEIDLNLALASAAEHSSSPFSDSF-QLPAKAQELLDSIAV 545

Query: 327 LEITVSKLEEELVALHFQLSQERNERRLAEY 419
           LEITVSKLE++LVAL++QL+QERNERRL+EY
Sbjct: 546 LEITVSKLEQKLVALNYQLTQERNERRLSEY 576


>ref|XP_002308502.1| predicted protein [Populus trichocarpa] gi|222854478|gb|EEE92025.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/80 (71%), Positives = 70/80 (87%)
 Frame = +3

Query: 180 ITALQKQLEEEIDLHLALASAVDHSNATFSNSIGQLPDKAQELVTNIAVLEITVSKLEEE 359
           +  LQ+QL+EEI + LALASAV+HS+++ SNS  QLPDKAQEL+ +IA+LEITVSKLE+E
Sbjct: 1   VKKLQQQLQEEIAVRLALASAVEHSDSSLSNSPCQLPDKAQELLDSIAILEITVSKLEQE 60

Query: 360 LVALHFQLSQERNERRLAEY 419
            VAL +QLSQERNERRLAEY
Sbjct: 61  SVALQYQLSQERNERRLAEY 80


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