BLASTX nr result

ID: Coptis21_contig00002192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002192
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39266.1| unknown [Lotus japonicus]                              329   3e-88
ref|XP_002534312.1| 40S ribosomal protein S5, putative [Ricinus ...   329   3e-88
gb|ADR71287.1| 40S ribosomal protein S5B [Hevea brasiliensis]         328   7e-88
gb|ADR71286.1| 40S ribosomal protein S5A [Hevea brasiliensis]         328   7e-88
ref|XP_004139502.1| PREDICTED: 40S ribosomal protein S5-1-like i...   327   9e-88

>gb|AFK39266.1| unknown [Lotus japonicus]
          Length = 204

 Score =  329 bits (843), Expect = 3e-88
 Identities = 161/181 (88%), Positives = 174/181 (96%)
 Frame = +2

Query: 110 QQEVKLFNRWTYEEIQVTDFSLVDYIGVQSSKHATYIPHTAGRYSAKRFRKAQCPIVERL 289
           Q EVKLFNRW+Y+++QVTD SL DY+GV +SKHATY+PHTAGRYS KRFRKAQCPI+ERL
Sbjct: 13  QIEVKLFNRWSYDDVQVTDISLADYVGVVASKHATYVPHTAGRYSVKRFRKAQCPIIERL 72

Query: 290 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVKNSGPREDATRIGSAG 469
           TNSLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDLNP+QVIVDAV NSGPREDATRIGSAG
Sbjct: 73  TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQVIVDAVINSGPREDATRIGSAG 132

Query: 470 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKSIAECLADELVNAHKGSSNSYAIKK 649
           VVRRQAVDISPLRRVNQAIYLLTTGARE+AFRNIK+IAECLADEL+NA KGSSNSYAIKK
Sbjct: 133 VVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKK 192

Query: 650 K 652
           K
Sbjct: 193 K 193


>ref|XP_002534312.1| 40S ribosomal protein S5, putative [Ricinus communis]
           gi|223525513|gb|EEF28068.1| 40S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 209

 Score =  329 bits (843), Expect = 3e-88
 Identities = 163/179 (91%), Positives = 172/179 (96%)
 Frame = +2

Query: 116 EVKLFNRWTYEEIQVTDFSLVDYIGVQSSKHATYIPHTAGRYSAKRFRKAQCPIVERLTN 295
           EVKLFNRWT+E++QV D SL DYIG+Q +KHATY+PHTAGRYS KRFRKAQCPIVERLTN
Sbjct: 20  EVKLFNRWTFEDVQVNDISLSDYIGIQPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 79

Query: 296 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVKNSGPREDATRIGSAGVV 475
           SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAV NSGPREDATRIGSAGVV
Sbjct: 80  SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 139

Query: 476 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKSIAECLADELVNAHKGSSNSYAIKKK 652
           RRQAVDISPLRRVNQAIYLLTTGARE+AFRNIK+IAECLADEL+NA KGSSNSYAIKKK
Sbjct: 140 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 198


>gb|ADR71287.1| 40S ribosomal protein S5B [Hevea brasiliensis]
          Length = 209

 Score =  328 bits (840), Expect = 7e-88
 Identities = 164/179 (91%), Positives = 171/179 (95%)
 Frame = +2

Query: 116 EVKLFNRWTYEEIQVTDFSLVDYIGVQSSKHATYIPHTAGRYSAKRFRKAQCPIVERLTN 295
           EVKLFNRWT+EE+QV D SL DYIGVQ +KHATY+PHTAGRYS KRFRKAQCPIVERLTN
Sbjct: 20  EVKLFNRWTFEEVQVNDISLSDYIGVQPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 79

Query: 296 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVKNSGPREDATRIGSAGVV 475
           SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDAV NSGPREDATRIGSAGVV
Sbjct: 80  SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 139

Query: 476 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKSIAECLADELVNAHKGSSNSYAIKKK 652
           RRQAVDISPLRRVNQAIYLLTTGARE+AFRNIK+IAECLADEL+NA KGSSNSYAIKKK
Sbjct: 140 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 198


>gb|ADR71286.1| 40S ribosomal protein S5A [Hevea brasiliensis]
          Length = 209

 Score =  328 bits (840), Expect = 7e-88
 Identities = 164/179 (91%), Positives = 171/179 (95%)
 Frame = +2

Query: 116 EVKLFNRWTYEEIQVTDFSLVDYIGVQSSKHATYIPHTAGRYSAKRFRKAQCPIVERLTN 295
           EVKLFNRWT+EE+QV D SL DYIGVQ +KHATY+PHTAGRYS KRFRKAQCPIVERLTN
Sbjct: 20  EVKLFNRWTFEEVQVNDISLSDYIGVQPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 79

Query: 296 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVKNSGPREDATRIGSAGVV 475
           SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDAV NSGPREDATRIGSAGVV
Sbjct: 80  SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 139

Query: 476 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKSIAECLADELVNAHKGSSNSYAIKKK 652
           RRQAVDISPLRRVNQAIYLLTTGARE+AFRNIK+IAECLADEL+NA KGSSNSYAIKKK
Sbjct: 140 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 198


>ref|XP_004139502.1| PREDICTED: 40S ribosomal protein S5-1-like isoform 1 [Cucumis
           sativus] gi|449443476|ref|XP_004139503.1| PREDICTED: 40S
           ribosomal protein S5-1-like isoform 2 [Cucumis sativus]
          Length = 207

 Score =  327 bits (839), Expect = 9e-88
 Identities = 161/192 (83%), Positives = 175/192 (91%)
 Frame = +2

Query: 77  ITVRIMAVVSQQQEVKLFNRWTYEEIQVTDFSLVDYIGVQSSKHATYIPHTAGRYSAKRF 256
           + V    +     +VKLFNRWT++++QV D SLVDY+GV  +KHATY+PHTAGRYS KRF
Sbjct: 5   VDVASQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSVKRF 64

Query: 257 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVKNSGP 436
           RKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDLNPIQVIVDAV NSGP
Sbjct: 65  RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP 124

Query: 437 REDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKSIAECLADELVNAH 616
           REDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARE+AFRNIK+IAECLADEL+NA 
Sbjct: 125 REDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAA 184

Query: 617 KGSSNSYAIKKK 652
           KGSSNSYAIKKK
Sbjct: 185 KGSSNSYAIKKK 196


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